RNA–Protein interactions for RNA: ENST00000547228.1

PFDN5-205, Transcript of prefoldin subunit 5, humanhuman

TSL 5

Gene PFDN5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-205ENST00000547228 NISCHQ9Y2I1 1504 aa14.56□□□□□ -0.08
PFDN5-205ENST00000547228 ABCC9O60706 1549 aa13.68□□□□□ -0.22
PFDN5-205ENST00000547228 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
PFDN5-205ENST00000547228 CCDC180Q9P1Z9 1646 aa13.13□□□□□ -0.31
PFDN5-205ENST00000547228 AEBP2Q6ZN18 517 aaPredicted RBP13.08□□□□□ -0.32
PFDN5-205ENST00000547228 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
PFDN5-205ENST00000547228 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
PFDN5-205ENST00000547228 DCAF8L2P0C7V8 631 aa12.71□□□□□ -0.37
PFDN5-205ENST00000547228 NACADO15069 1562 aa12.64□□□□□ -0.39
PFDN5-205ENST00000547228 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
PFDN5-205ENST00000547228 POTEDQ86YR6 584 aa12.53□□□□□ -0.4
PFDN5-205ENST00000547228 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.43
PFDN5-205ENST00000547228 CHIC1Q5VXU3 224 aa12.38□□□□□ -0.43
PFDN5-205ENST00000547228 BICRAQ9NZM4 1560 aa12.36□□□□□ -0.43
PFDN5-205ENST00000547228 MYO15BQ96JP2 1530 aa12.33□□□□□ -0.44
PFDN5-205ENST00000547228 SHROOM4Q9ULL8 1493 aa12.27□□□□□ -0.45
PFDN5-205ENST00000547228 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
PFDN5-205ENST00000547228 UNC13AQ9UPW8 1703 aa12.26□□□□□ -0.45
PFDN5-205ENST00000547228 EIF4G1Q04637 1599 aaKnown RBP12.15□□□□□ -0.46
PFDN5-205ENST00000547228 SCRIBQ14160 1630 aa12.01□□□□□ -0.49
PFDN5-205ENST00000547228 DCAF1Q9Y4B6 1507 aa12□□□□□ -0.49
PFDN5-205ENST00000547228 CUX2O14529 1486 aa11.99□□□□□ -0.49
PFDN5-205ENST00000547228 ZCCHC6Q5VYS8 1495 aaKnown RBP11.94□□□□□ -0.5
PFDN5-205ENST00000547228 ERCC6Q03468 1493 aa11.9□□□□□ -0.5
PFDN5-205ENST00000547228 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
PFDN5-205ENST00000547228 NCAPD3P42695 1498 aa11.72□□□□□ -0.53
PFDN5-205ENST00000547228 ATAD2BQ9ULI0 1458 aa11.59□□□□□ -0.55
PFDN5-205ENST00000547228 NESP48681 1621 aa11.58□□□□□ -0.56
PFDN5-205ENST00000547228 PDS5BQ9NTI5 1447 aa11.53□□□□□ -0.56
PFDN5-205ENST00000547228 SMARCA2P51531 1590 aa11.53□□□□□ -0.56
PFDN5-205ENST00000547228 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
PFDN5-205ENST00000547228 HMGXB3Q12766 1538 aa11.51□□□□□ -0.57
PFDN5-205ENST00000547228 BAZ1BQ9UIG0 1483 aaKnown RBP11.47□□□□□ -0.57
PFDN5-205ENST00000547228 THOC2Q8NI27 1593 aaKnown RBP11.46□□□□□ -0.57
PFDN5-205ENST00000547228 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
PFDN5-205ENST00000547228 CADPSQ9ULU8 1353 aa11.38□□□□□ -0.59
PFDN5-205ENST00000547228 SMARCA4P51532 1647 aa11.38□□□□□ -0.59
PFDN5-205ENST00000547228 MRC2Q9UBG0 1479 aa11.37□□□□□ -0.59
PFDN5-205ENST00000547228 BAZ1AQ9NRL2 1556 aaPredicted RBP11.34□□□□□ -0.59
PFDN5-205ENST00000547228 TRHP20396 242 aaPredicted RBP11.31□□□□□ -0.6
PFDN5-205ENST00000547228 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
PFDN5-205ENST00000547228 WDR62O43379 1518 aa11.29□□□□□ -0.6
PFDN5-205ENST00000547228 PEG3Q9GZU2 1588 aa11.28□□□□□ -0.6
PFDN5-205ENST00000547228 CYB5RLQ6IPT4 315 aa11.26□□□□□ -0.61
PFDN5-205ENST00000547228 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
PFDN5-205ENST00000547228 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
PFDN5-205ENST00000547228 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
PFDN5-205ENST00000547228 SENP3Q9H4L4 574 aaPredicted RBP11.18□□□□□ -0.62
PFDN5-205ENST00000547228 MROH2BQ7Z745 1585 aa11.18□□□□□ -0.62
PFDN5-205ENST00000547228 RIMBP3CA6NJZ7 1639 aa11.16□□□□□ -0.62
PFDN5-205ENST00000547228 RIMBP3BA6NNM3 1639 aa11.16□□□□□ -0.62
PFDN5-205ENST00000547228 RIMBP3Q9UFD9 1639 aa11.16□□□□□ -0.62
PFDN5-205ENST00000547228 ARHGEF11O15085 1522 aa11.14□□□□□ -0.63
PFDN5-205ENST00000547228 CFTRP13569 1480 aa11.11□□□□□ -0.63
PFDN5-205ENST00000547228 URB2Q14146 1524 aaKnown RBP11.08□□□□□ -0.64
PFDN5-205ENST00000547228 FBLN2P98095 1184 aa11.07□□□□□ -0.64
PFDN5-205ENST00000547228 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
PFDN5-205ENST00000547228 PHF23Q9BUL5 403 aaPredicted RBP11.04□□□□□ -0.64
PFDN5-205ENST00000547228 ZNF608Q9ULD9 1512 aaPredicted RBP11.02□□□□□ -0.65
PFDN5-205ENST00000547228 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
PFDN5-205ENST00000547228 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
PFDN5-205ENST00000547228 WIZO95785 1651 aa10.97□□□□□ -0.65
PFDN5-205ENST00000547228 ABCC8Q09428 1581 aa10.94□□□□□ -0.66
PFDN5-205ENST00000547228 AQRO60306 1485 aaKnown RBP eCLIP10.93□□□□□ -0.666e-7■■■■■ 36.8
PFDN5-205ENST00000547228 CHMP7Q8WUX9 453 aaPredicted RBP10.92□□□□□ -0.66
PFDN5-205ENST00000547228 TOPBP1Q92547 1522 aa10.9□□□□□ -0.66
PFDN5-205ENST00000547228 TOP2AP11388 1531 aaKnown RBP10.86□□□□□ -0.67
PFDN5-205ENST00000547228 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
PFDN5-205ENST00000547228 TDRD9Q8NDG6 1382 aaKnown RBP10.82□□□□□ -0.68
PFDN5-205ENST00000547228 SOGA1O94964 1423 aa10.81□□□□□ -0.68
PFDN5-205ENST00000547228 ILDR1Q86SU0 546 aaPredicted RBP10.8□□□□□ -0.68
PFDN5-205ENST00000547228 CCDC88BA6NC98 1476 aa10.8□□□□□ -0.68
PFDN5-205ENST00000547228 CHD1O14646 1710 aa10.79□□□□□ -0.68
PFDN5-205ENST00000547228 DNMBPQ6XZF7 1577 aa10.79□□□□□ -0.68
PFDN5-205ENST00000547228 GAPVD1Q14C86 1478 aa10.77□□□□□ -0.69
PFDN5-205ENST00000547228 SYNJ1O43426 1573 aa10.77□□□□□ -0.69
PFDN5-205ENST00000547228 TARBP1Q13395 1621 aaKnown RBP10.76□□□□□ -0.69
PFDN5-205ENST00000547228 POLA1P09884 1462 aaPredicted RBP10.76□□□□□ -0.69
PFDN5-205ENST00000547228 SNAPC4Q5SXM2 1469 aa10.75□□□□□ -0.69
PFDN5-205ENST00000547228 CLASP1Q7Z460 1538 aa10.75□□□□□ -0.69
PFDN5-205ENST00000547228 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
PFDN5-205ENST00000547228 MAGI1Q96QZ7 1491 aaPredicted RBP10.74□□□□□ -0.69
PFDN5-205ENST00000547228 SYNJ2O15056 1496 aa10.72□□□□□ -0.69
PFDN5-205ENST00000547228 GRIN2BQ13224 1484 aa10.72□□□□□ -0.69
PFDN5-205ENST00000547228 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
PFDN5-205ENST00000547228 NPM1P06748 294 aaKnown RBP eCLIP10.68□□□□□ -0.7
PFDN5-205ENST00000547228 EHMT2Q96KQ7 1210 aa10.68□□□□□ -0.7
PFDN5-205ENST00000547228 WDR97A6NE52 1622 aa10.67□□□□□ -0.7
PFDN5-205ENST00000547228 FAM69CQ0P6D2 419 aa10.66□□□□□ -0.7
PFDN5-205ENST00000547228 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
PFDN5-205ENST00000547228 FGD5Q6ZNL6 1462 aa10.64□□□□□ -0.71
PFDN5-205ENST00000547228 JPH4Q96JJ6 628 aa10.56□□□□□ -0.72
PFDN5-205ENST00000547228 GRIN2AQ12879 1464 aa10.55□□□□□ -0.72
PFDN5-205ENST00000547228 ABCC10Q5T3U5 1492 aa10.55□□□□□ -0.72
PFDN5-205ENST00000547228 CUX1P39880 1505 aa10.53□□□□□ -0.72
PFDN5-205ENST00000547228 CEP170Q5SW79 1584 aa10.52□□□□□ -0.72
PFDN5-205ENST00000547228 ERCC6L2Q5T890 1561 aa10.52□□□□□ -0.72
PFDN5-205ENST00000547228 NUP160Q12769 1436 aa10.52□□□□□ -0.73
PFDN5-205ENST00000547228 PRG4Q92954 1404 aaPredicted RBP10.52□□□□□ -0.73
PFDN5-205ENST00000547228 ABCA10Q8WWZ4 1543 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms