RNA–Protein interactions for RNA: ENST00000547197.1

ITGA5-203, Transcript of integrin subunit alpha 5, humanhuman

TSL 3

Gene ITGA5, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-203ENST00000547197 NISCHQ9Y2I1 1504 aa35.23■■■■□ 3.23
ITGA5-203ENST00000547197 ABCC9O60706 1549 aa32.82■■■□□ 2.84
ITGA5-203ENST00000547197 CCDC180Q9P1Z9 1646 aa31.87■■■□□ 2.69
ITGA5-203ENST00000547197 DNAJC5BQ9UF47 199 aa31.79■■■□□ 2.68
ITGA5-203ENST00000547197 RB1CC1Q8TDY2 1594 aa30.77■■■□□ 2.52
ITGA5-203ENST00000547197 PABPN1Q86U42 306 aaKnown RBP eCLIP30.48■■■□□ 2.47
ITGA5-203ENST00000547197 NACADO15069 1562 aa30.4■■■□□ 2.46
ITGA5-203ENST00000547197 UNC13AQ9UPW8 1703 aa30.1■■■□□ 2.41
ITGA5-203ENST00000547197 BICRAQ9NZM4 1560 aa30.07■■■□□ 2.4
ITGA5-203ENST00000547197 DCAF8L2P0C7V8 631 aa30.04■■■□□ 2.4
ITGA5-203ENST00000547197 MYO15BQ96JP2 1530 aa29.75■■■□□ 2.35
ITGA5-203ENST00000547197 DNAJC5Q9H3Z4 198 aa29.73■■■□□ 2.35
ITGA5-203ENST00000547197 CECR2Q9BXF3 1484 aa29.65■■■□□ 2.34
ITGA5-203ENST00000547197 CC2D2AQ9P2K1 1620 aa29.58■■■□□ 2.33
ITGA5-203ENST00000547197 SHROOM4Q9ULL8 1493 aa29.43■■■□□ 2.3
ITGA5-203ENST00000547197 EIF4G1Q04637 1599 aaKnown RBP29.31■■■□□ 2.28
ITGA5-203ENST00000547197 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
ITGA5-203ENST00000547197 SCRIBQ14160 1630 aa29■■■□□ 2.23
ITGA5-203ENST00000547197 ZCCHC6Q5VYS8 1495 aaKnown RBP28.99■■■□□ 2.23
ITGA5-203ENST00000547197 CUX2O14529 1486 aa28.6■■■□□ 2.17
ITGA5-203ENST00000547197 ERCC6Q03468 1493 aa28.28■■■□□ 2.12
ITGA5-203ENST00000547197 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
ITGA5-203ENST00000547197 NESP48681 1621 aa27.99■■■□□ 2.07
ITGA5-203ENST00000547197 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
ITGA5-203ENST00000547197 TRIM41Q8WV44 630 aa27.93■■■□□ 2.06
ITGA5-203ENST00000547197 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
ITGA5-203ENST00000547197 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
ITGA5-203ENST00000547197 SMARCA2P51531 1590 aa27.7■■■□□ 2.03
ITGA5-203ENST00000547197 SMARCA4P51532 1647 aa27.61■■■□□ 2.01
ITGA5-203ENST00000547197 LAMC3Q9Y6N6 1575 aa27.56■■■□□ 2
ITGA5-203ENST00000547197 BAZ1BQ9UIG0 1483 aaKnown RBP27.51■■■□□ 2
ITGA5-203ENST00000547197 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
ITGA5-203ENST00000547197 PDS5BQ9NTI5 1447 aa27.44■■□□□ 1.98
ITGA5-203ENST00000547197 PEG3Q9GZU2 1588 aa27.4■■□□□ 1.98
ITGA5-203ENST00000547197 BAZ1AQ9NRL2 1556 aaPredicted RBP27.32■■□□□ 1.96
ITGA5-203ENST00000547197 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
ITGA5-203ENST00000547197 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
ITGA5-203ENST00000547197 WDR62O43379 1518 aa27.24■■□□□ 1.95
ITGA5-203ENST00000547197 OSCARQ8IYS5 282 aa27.2■■□□□ 1.94
ITGA5-203ENST00000547197 MROH2BQ7Z745 1585 aa27.16■■□□□ 1.94
ITGA5-203ENST00000547197 CEP164Q9UPV0 1460 aa26.94■■□□□ 1.9
ITGA5-203ENST00000547197 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
ITGA5-203ENST00000547197 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
ITGA5-203ENST00000547197 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
ITGA5-203ENST00000547197 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
ITGA5-203ENST00000547197 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
ITGA5-203ENST00000547197 CFTRP13569 1480 aa26.75■■□□□ 1.87
ITGA5-203ENST00000547197 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
ITGA5-203ENST00000547197 WIZO95785 1651 aa26.73■■□□□ 1.87
ITGA5-203ENST00000547197 CYB5RLQ6IPT4 315 aa26.64■■□□□ 1.86
ITGA5-203ENST00000547197 ZNF608Q9ULD9 1512 aaPredicted RBP26.6■■□□□ 1.85
ITGA5-203ENST00000547197 TRHP20396 242 aaPredicted RBP26.53■■□□□ 1.84
ITGA5-203ENST00000547197 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
ITGA5-203ENST00000547197 ARAP1Q96P48 1450 aa26.46■■□□□ 1.83
ITGA5-203ENST00000547197 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
ITGA5-203ENST00000547197 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
ITGA5-203ENST00000547197 RSF1Q96T23 1441 aaPredicted RBP26.3■■□□□ 1.8
ITGA5-203ENST00000547197 TOPBP1Q92547 1522 aa26.29■■□□□ 1.8
ITGA5-203ENST00000547197 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
ITGA5-203ENST00000547197 CHD1O14646 1710 aa26.24■■□□□ 1.79
ITGA5-203ENST00000547197 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.791e-6■■■■■ 30.7
ITGA5-203ENST00000547197 PRDM2Q13029 1718 aa26.22■■□□□ 1.79
ITGA5-203ENST00000547197 TARBP1Q13395 1621 aaKnown RBP26.14■■□□□ 1.78
ITGA5-203ENST00000547197 FBLN2P98095 1184 aa26.14■■□□□ 1.78
ITGA5-203ENST00000547197 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
ITGA5-203ENST00000547197 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
ITGA5-203ENST00000547197 DNMBPQ6XZF7 1577 aa26.07■■□□□ 1.76
ITGA5-203ENST00000547197 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
ITGA5-203ENST00000547197 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
ITGA5-203ENST00000547197 TDRD9Q8NDG6 1382 aaKnown RBP25.94■■□□□ 1.74
ITGA5-203ENST00000547197 RAD54L2Q9Y4B4 1467 aa25.93■■□□□ 1.74
ITGA5-203ENST00000547197 SNAPC4Q5SXM2 1469 aa25.87■■□□□ 1.73
ITGA5-203ENST00000547197 SOGA1O94964 1423 aa25.84■■□□□ 1.73
ITGA5-203ENST00000547197 CHMP7Q8WUX9 453 aaPredicted RBP25.83■■□□□ 1.73
ITGA5-203ENST00000547197 SYNJ1O43426 1573 aa25.82■■□□□ 1.72
ITGA5-203ENST00000547197 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
ITGA5-203ENST00000547197 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
ITGA5-203ENST00000547197 SYNJ2O15056 1496 aa25.71■■□□□ 1.71
ITGA5-203ENST00000547197 WDR97A6NE52 1622 aa25.7■■□□□ 1.71
ITGA5-203ENST00000547197 GRIN2BQ13224 1484 aa25.68■■□□□ 1.7
ITGA5-203ENST00000547197 FGD5Q6ZNL6 1462 aa25.67■■□□□ 1.7
ITGA5-203ENST00000547197 ERCC6L2Q5T890 1561 aa25.6■■□□□ 1.69
ITGA5-203ENST00000547197 CUX1P39880 1505 aa25.54■■□□□ 1.68
ITGA5-203ENST00000547197 ILDR1Q86SU0 546 aaPredicted RBP25.48■■□□□ 1.67
ITGA5-203ENST00000547197 PBRM1Q86U86 1689 aa25.44■■□□□ 1.66
ITGA5-203ENST00000547197 KIF13AQ9H1H9 1805 aa25.43■■□□□ 1.66
ITGA5-203ENST00000547197 KDM4FA0A1W2PPD8 638 aa25.4■■□□□ 1.66
ITGA5-203ENST00000547197 CEP170Q5SW79 1584 aa25.39■■□□□ 1.66
ITGA5-203ENST00000547197 GRIN2AQ12879 1464 aa25.37■■□□□ 1.65
ITGA5-203ENST00000547197 NUP160Q12769 1436 aa25.37■■□□□ 1.65
ITGA5-203ENST00000547197 ABCA5Q8WWZ7 1642 aa25.35■■□□□ 1.65
ITGA5-203ENST00000547197 ABCA10Q8WWZ4 1543 aa25.34■■□□□ 1.65
ITGA5-203ENST00000547197 SHROOM2Q13796 1616 aa25.31■■□□□ 1.64
ITGA5-203ENST00000547197 FAM69CQ0P6D2 419 aa25.24■■□□□ 1.63
ITGA5-203ENST00000547197 ABCC10Q5T3U5 1492 aa25.23■■□□□ 1.63
ITGA5-203ENST00000547197 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
ITGA5-203ENST00000547197 PRG4Q92954 1404 aaPredicted RBP25.15■■□□□ 1.62
ITGA5-203ENST00000547197 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
ITGA5-203ENST00000547197 JPH4Q96JJ6 628 aa25.12■■□□□ 1.61
ITGA5-203ENST00000547197 DIP2BQ9P265 1576 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms