RNA–Protein interactions for RNA: ENST00000547107.5

NPIPP1-203, Transcript of nuclear pore complex interacting protein pseudogene 1, humanhuman

BASIC

Gene NPIPP1, Length 1,071 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPP1-203ENST00000547107 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
NPIPP1-203ENST00000547107 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
NPIPP1-203ENST00000547107 NISCHQ9Y2I1 1504 aa18.75■□□□□ 0.59
NPIPP1-203ENST00000547107 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
NPIPP1-203ENST00000547107 ABCC9O60706 1549 aa16.84■□□□□ 0.29
NPIPP1-203ENST00000547107 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
NPIPP1-203ENST00000547107 CCDC180Q9P1Z9 1646 aa16.56■□□□□ 0.24
NPIPP1-203ENST00000547107 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
NPIPP1-203ENST00000547107 DCAF8L2P0C7V8 631 aa15.73■□□□□ 0.11
NPIPP1-203ENST00000547107 FOXD1Q16676 465 aa15.71■□□□□ 0.11
NPIPP1-203ENST00000547107 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
NPIPP1-203ENST00000547107 ZCCHC6Q5VYS8 1495 aaKnown RBP15.62■□□□□ 0.09
NPIPP1-203ENST00000547107 NACADO15069 1562 aa15.62■□□□□ 0.09
NPIPP1-203ENST00000547107 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
NPIPP1-203ENST00000547107 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
NPIPP1-203ENST00000547107 MYO15BQ96JP2 1530 aa15.54■□□□□ 0.08
NPIPP1-203ENST00000547107 DCAF1Q9Y4B6 1507 aa15.49■□□□□ 0.07
NPIPP1-203ENST00000547107 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
NPIPP1-203ENST00000547107 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
NPIPP1-203ENST00000547107 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
NPIPP1-203ENST00000547107 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
NPIPP1-203ENST00000547107 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
NPIPP1-203ENST00000547107 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
NPIPP1-203ENST00000547107 SHROOM4Q9ULL8 1493 aa14.96□□□□□ -0.01
NPIPP1-203ENST00000547107 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
NPIPP1-203ENST00000547107 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
NPIPP1-203ENST00000547107 ADRA2BP18089 450 aa14.84□□□□□ -0.03
NPIPP1-203ENST00000547107 PIAS4Q8N2W9 510 aaPredicted RBP14.73□□□□□ -0.05
NPIPP1-203ENST00000547107 CUX2O14529 1486 aa14.69□□□□□ -0.06
NPIPP1-203ENST00000547107 TRIM41Q8WV44 630 aa14.68□□□□□ -0.06
NPIPP1-203ENST00000547107 MSH5O43196 834 aa14.58□□□□□ -0.08
NPIPP1-203ENST00000547107 ERCC6Q03468 1493 aa14.54□□□□□ -0.08
NPIPP1-203ENST00000547107 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
NPIPP1-203ENST00000547107 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
NPIPP1-203ENST00000547107 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
NPIPP1-203ENST00000547107 ATAD2BQ9ULI0 1458 aa14.46□□□□□ -0.09
NPIPP1-203ENST00000547107 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
NPIPP1-203ENST00000547107 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
NPIPP1-203ENST00000547107 PEG3Q9GZU2 1588 aa14.35□□□□□ -0.11
NPIPP1-203ENST00000547107 RSF1Q96T23 1441 aaPredicted RBP14.34□□□□□ -0.11
NPIPP1-203ENST00000547107 HMGXB3Q12766 1538 aa14.33□□□□□ -0.12
NPIPP1-203ENST00000547107 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
NPIPP1-203ENST00000547107 WIZO95785 1651 aa14.27□□□□□ -0.12
NPIPP1-203ENST00000547107 NESP48681 1621 aa14.26□□□□□ -0.13
NPIPP1-203ENST00000547107 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
NPIPP1-203ENST00000547107 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
NPIPP1-203ENST00000547107 SUPT5HO00267 1087 aaKnown RBP14.07□□□□□ -0.16
NPIPP1-203ENST00000547107 CADPSQ9ULU8 1353 aa14.04□□□□□ -0.16
NPIPP1-203ENST00000547107 CCDC88BA6NC98 1476 aa14.01□□□□□ -0.17
NPIPP1-203ENST00000547107 OSCARQ8IYS5 282 aa14□□□□□ -0.17
NPIPP1-203ENST00000547107 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
NPIPP1-203ENST00000547107 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
NPIPP1-203ENST00000547107 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.18
NPIPP1-203ENST00000547107 CFTRP13569 1480 aa13.94□□□□□ -0.18
NPIPP1-203ENST00000547107 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
NPIPP1-203ENST00000547107 FANCD2Q9BXW9 1451 aa13.86□□□□□ -0.19
NPIPP1-203ENST00000547107 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
NPIPP1-203ENST00000547107 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
NPIPP1-203ENST00000547107 RIMBP3CA6NJZ7 1639 aa13.85□□□□□ -0.19
NPIPP1-203ENST00000547107 RIMBP3BA6NNM3 1639 aa13.85□□□□□ -0.19
NPIPP1-203ENST00000547107 RIMBP3Q9UFD9 1639 aa13.85□□□□□ -0.19
NPIPP1-203ENST00000547107 CEP164Q9UPV0 1460 aa13.82□□□□□ -0.2
NPIPP1-203ENST00000547107 WDR62O43379 1518 aa13.81□□□□□ -0.2
NPIPP1-203ENST00000547107 CYB5RLQ6IPT4 315 aa13.77□□□□□ -0.21
NPIPP1-203ENST00000547107 ARHGEF11O15085 1522 aa13.73□□□□□ -0.21
NPIPP1-203ENST00000547107 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.21
NPIPP1-203ENST00000547107 PRDM2Q13029 1718 aa13.71□□□□□ -0.21
NPIPP1-203ENST00000547107 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
NPIPP1-203ENST00000547107 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
NPIPP1-203ENST00000547107 DNMBPQ6XZF7 1577 aa13.61□□□□□ -0.23
NPIPP1-203ENST00000547107 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
NPIPP1-203ENST00000547107 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
NPIPP1-203ENST00000547107 ARAP1Q96P48 1450 aa13.56□□□□□ -0.24
NPIPP1-203ENST00000547107 CUX1P39880 1505 aa13.56□□□□□ -0.24
NPIPP1-203ENST00000547107 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
NPIPP1-203ENST00000547107 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
NPIPP1-203ENST00000547107 POLA1P09884 1462 aaPredicted RBP13.52□□□□□ -0.25
NPIPP1-203ENST00000547107 ZNF608Q9ULD9 1512 aaPredicted RBP13.51□□□□□ -0.25
NPIPP1-203ENST00000547107 SOGA1O94964 1423 aa13.51□□□□□ -0.25
NPIPP1-203ENST00000547107 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
NPIPP1-203ENST00000547107 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
NPIPP1-203ENST00000547107 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
NPIPP1-203ENST00000547107 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
NPIPP1-203ENST00000547107 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
NPIPP1-203ENST00000547107 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
NPIPP1-203ENST00000547107 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
NPIPP1-203ENST00000547107 AQRO60306 1485 aaKnown RBP eCLIP13.43□□□□□ -0.26
NPIPP1-203ENST00000547107 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
NPIPP1-203ENST00000547107 TOP2BQ02880 1626 aa13.42□□□□□ -0.26
NPIPP1-203ENST00000547107 FBLN2P98095 1184 aa13.42□□□□□ -0.26
NPIPP1-203ENST00000547107 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
NPIPP1-203ENST00000547107 DMRT2Q9Y5R5 561 aa13.4□□□□□ -0.26
NPIPP1-203ENST00000547107 ABCA10Q8WWZ4 1543 aa13.38□□□□□ -0.27
NPIPP1-203ENST00000547107 EIF4G3O43432 1585 aaKnown RBP13.37□□□□□ -0.27
NPIPP1-203ENST00000547107 CHD1O14646 1710 aa13.36□□□□□ -0.27
NPIPP1-203ENST00000547107 GAPVD1Q14C86 1478 aa13.33□□□□□ -0.28
NPIPP1-203ENST00000547107 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
NPIPP1-203ENST00000547107 GRIN2BQ13224 1484 aa13.32□□□□□ -0.28
NPIPP1-203ENST00000547107 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
NPIPP1-203ENST00000547107 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms