RNA–Protein interactions for RNA: ENST00000547106.1

KRT2-202, Transcript of keratin 2, humanhuman

TSL 4

Gene KRT2, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2-202ENST00000547106 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
KRT2-202ENST00000547106 CCDC180Q9P1Z9 1646 aa26.75■■□□□ 1.87
KRT2-202ENST00000547106 ABCC9O60706 1549 aa25.81■■□□□ 1.72
KRT2-202ENST00000547106 ZCCHC6Q5VYS8 1495 aaKnown RBP25.23■■□□□ 1.63
KRT2-202ENST00000547106 NACADO15069 1562 aa25.03■■□□□ 1.6
KRT2-202ENST00000547106 DCAF1Q9Y4B6 1507 aa25.01■■□□□ 1.59
KRT2-202ENST00000547106 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
KRT2-202ENST00000547106 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
KRT2-202ENST00000547106 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
KRT2-202ENST00000547106 UNC13AQ9UPW8 1703 aa24.48■■□□□ 1.51
KRT2-202ENST00000547106 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
KRT2-202ENST00000547106 BICRAQ9NZM4 1560 aa24.26■■□□□ 1.47
KRT2-202ENST00000547106 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
KRT2-202ENST00000547106 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
KRT2-202ENST00000547106 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
KRT2-202ENST00000547106 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
KRT2-202ENST00000547106 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
KRT2-202ENST00000547106 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
KRT2-202ENST00000547106 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
KRT2-202ENST00000547106 BAZ1AQ9NRL2 1556 aaPredicted RBP23.36■■□□□ 1.33
KRT2-202ENST00000547106 MROH2BQ7Z745 1585 aa23.26■■□□□ 1.31
KRT2-202ENST00000547106 PEG3Q9GZU2 1588 aa23.16■■□□□ 1.3
KRT2-202ENST00000547106 ATAD2BQ9ULI0 1458 aa23.14■■□□□ 1.29
KRT2-202ENST00000547106 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
KRT2-202ENST00000547106 NCAPD3P42695 1498 aa23.08■■□□□ 1.29
KRT2-202ENST00000547106 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.28
KRT2-202ENST00000547106 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
KRT2-202ENST00000547106 WIZO95785 1651 aa23.03■■□□□ 1.28
KRT2-202ENST00000547106 BAZ1BQ9UIG0 1483 aaKnown RBP22.96■■□□□ 1.27
KRT2-202ENST00000547106 TOP2AP11388 1531 aaKnown RBP22.82■■□□□ 1.24
KRT2-202ENST00000547106 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
KRT2-202ENST00000547106 CCDC88BA6NC98 1476 aa22.5■■□□□ 1.19
KRT2-202ENST00000547106 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
KRT2-202ENST00000547106 NESP48681 1621 aa22.44■■□□□ 1.18
KRT2-202ENST00000547106 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
KRT2-202ENST00000547106 CFTRP13569 1480 aa22.35■■□□□ 1.17
KRT2-202ENST00000547106 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
KRT2-202ENST00000547106 KIF21AQ7Z4S6 1674 aa22.23■■□□□ 1.15
KRT2-202ENST00000547106 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
KRT2-202ENST00000547106 ERCC6Q03468 1493 aa22.21■■□□□ 1.15
KRT2-202ENST00000547106 FANCD2Q9BXW9 1451 aa22.16■■□□□ 1.14
KRT2-202ENST00000547106 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
KRT2-202ENST00000547106 THOC2Q8NI27 1593 aaKnown RBP22.11■■□□□ 1.13
KRT2-202ENST00000547106 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
KRT2-202ENST00000547106 WDR62O43379 1518 aa21.98■■□□□ 1.11
KRT2-202ENST00000547106 URB2Q14146 1524 aaKnown RBP21.95■■□□□ 1.1
KRT2-202ENST00000547106 CUX2O14529 1486 aa21.91■■□□□ 1.1
KRT2-202ENST00000547106 DNMBPQ6XZF7 1577 aa21.87■■□□□ 1.09
KRT2-202ENST00000547106 TOPBP1Q92547 1522 aa21.85■■□□□ 1.09
KRT2-202ENST00000547106 ABCC8Q09428 1581 aa21.82■■□□□ 1.08
KRT2-202ENST00000547106 CUX1P39880 1505 aa21.8■■□□□ 1.08
KRT2-202ENST00000547106 WRNQ14191 1432 aaPredicted RBP eCLIP21.74■■□□□ 1.07
KRT2-202ENST00000547106 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
KRT2-202ENST00000547106 BIVM-ERCC5R4GMW8 1640 aa21.72■■□□□ 1.07
KRT2-202ENST00000547106 TOP2BQ02880 1626 aa21.71■■□□□ 1.07
KRT2-202ENST00000547106 POLA1P09884 1462 aaPredicted RBP21.7■■□□□ 1.06
KRT2-202ENST00000547106 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
KRT2-202ENST00000547106 IFT140Q96RY7 1462 aa21.64■■□□□ 1.05
KRT2-202ENST00000547106 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
KRT2-202ENST00000547106 RAD54L2Q9Y4B4 1467 aa21.57■■□□□ 1.04
KRT2-202ENST00000547106 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
KRT2-202ENST00000547106 SOGA1O94964 1423 aa21.55■■□□□ 1.04
KRT2-202ENST00000547106 ZNF608Q9ULD9 1512 aaPredicted RBP21.52■■□□□ 1.04
KRT2-202ENST00000547106 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
KRT2-202ENST00000547106 ABCA10Q8WWZ4 1543 aa21.49■■□□□ 1.03
KRT2-202ENST00000547106 ABCA5Q8WWZ7 1642 aa21.42■■□□□ 1.02
KRT2-202ENST00000547106 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.02
KRT2-202ENST00000547106 TDRD9Q8NDG6 1382 aaKnown RBP21.39■■□□□ 1.02
KRT2-202ENST00000547106 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
KRT2-202ENST00000547106 GAPVD1Q14C86 1478 aa21.33■■□□□ 1.01
KRT2-202ENST00000547106 TRIM41Q8WV44 630 aa21.32■■□□□ 1
KRT2-202ENST00000547106 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
KRT2-202ENST00000547106 GRIN2BQ13224 1484 aa21.3■■□□□ 1
KRT2-202ENST00000547106 SNAPC4Q5SXM2 1469 aa21.25■□□□□ 0.99
KRT2-202ENST00000547106 KIF27Q86VH2 1401 aa21.24■□□□□ 0.99
KRT2-202ENST00000547106 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
KRT2-202ENST00000547106 MAGI1Q96QZ7 1491 aaPredicted RBP21.23■□□□□ 0.99
KRT2-202ENST00000547106 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
KRT2-202ENST00000547106 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
KRT2-202ENST00000547106 CHD1O14646 1710 aa21.15■□□□□ 0.98
KRT2-202ENST00000547106 SYNJ2O15056 1496 aa21.14■□□□□ 0.98
KRT2-202ENST00000547106 CUL7Q14999 1698 aa21.12■□□□□ 0.97
KRT2-202ENST00000547106 IGF1RP08069 1367 aa21.11■□□□□ 0.97
KRT2-202ENST00000547106 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
KRT2-202ENST00000547106 EEA1Q15075 1411 aa21.04■□□□□ 0.96
KRT2-202ENST00000547106 GRIN2AQ12879 1464 aa21.04■□□□□ 0.96
KRT2-202ENST00000547106 CHMP7Q8WUX9 453 aaPredicted RBP21.01■□□□□ 0.95
KRT2-202ENST00000547106 FBLN2P98095 1184 aa21■□□□□ 0.95
KRT2-202ENST00000547106 CARMIL1Q5VZK9 1371 aa20.98■□□□□ 0.95
KRT2-202ENST00000547106 CEP170Q5SW79 1584 aa20.96■□□□□ 0.95
KRT2-202ENST00000547106 PRXQ9BXM0 1461 aa20.95■□□□□ 0.94
KRT2-202ENST00000547106 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
KRT2-202ENST00000547106 NUP160Q12769 1436 aa20.95■□□□□ 0.94
KRT2-202ENST00000547106 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
KRT2-202ENST00000547106 RAPGEF2Q9Y4G8 1499 aa20.92■□□□□ 0.94
KRT2-202ENST00000547106 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
KRT2-202ENST00000547106 FAM9AQ8IZU1 332 aaPredicted RBP20.87■□□□□ 0.93
KRT2-202ENST00000547106 KIF21BO75037 1637 aa20.86■□□□□ 0.93
KRT2-202ENST00000547106 DNAJC5Q9H3Z4 198 aa20.82■□□□□ 0.92
KRT2-202ENST00000547106 SHROOM2Q13796 1616 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms