RNA–Protein interactions for RNA: ENST00000546653.5

VDR-203, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-203ENST00000546653 NISCHQ9Y2I1 1504 aa34.57■■■■□ 3.12
VDR-203ENST00000546653 ABCC9O60706 1549 aa32.09■■■□□ 2.73
VDR-203ENST00000546653 CCDC180Q9P1Z9 1646 aa31.35■■■□□ 2.61
VDR-203ENST00000546653 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
VDR-203ENST00000546653 RB1CC1Q8TDY2 1594 aa30.19■■■□□ 2.42
VDR-203ENST00000546653 NACADO15069 1562 aa29.8■■■□□ 2.36
VDR-203ENST00000546653 PABPN1Q86U42 306 aaKnown RBP eCLIP29.75■■■□□ 2.35
VDR-203ENST00000546653 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
VDR-203ENST00000546653 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
VDR-203ENST00000546653 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
VDR-203ENST00000546653 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
VDR-203ENST00000546653 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
VDR-203ENST00000546653 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
VDR-203ENST00000546653 SHROOM4Q9ULL8 1493 aa28.85■■■□□ 2.21
VDR-203ENST00000546653 DNAJC5Q9H3Z4 198 aa28.83■■■□□ 2.21
VDR-203ENST00000546653 EIF4G1Q04637 1599 aaKnown RBP28.72■■■□□ 2.19
VDR-203ENST00000546653 SCRIBQ14160 1630 aa28.52■■■□□ 2.16
VDR-203ENST00000546653 DCAF1Q9Y4B6 1507 aa28.5■■■□□ 2.15
VDR-203ENST00000546653 ZCCHC6Q5VYS8 1495 aaKnown RBP28.49■■■□□ 2.15
VDR-203ENST00000546653 CUX2O14529 1486 aa27.95■■■□□ 2.06
VDR-203ENST00000546653 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
VDR-203ENST00000546653 NCAPD3P42695 1498 aa27.54■■■□□ 2
VDR-203ENST00000546653 NESP48681 1621 aa27.39■■□□□ 1.98
VDR-203ENST00000546653 ATAD2BQ9ULI0 1458 aa27.35■■□□□ 1.97
VDR-203ENST00000546653 THOC2Q8NI27 1593 aaKnown RBP27.26■■□□□ 1.96
VDR-203ENST00000546653 HMGXB3Q12766 1538 aa27.26■■□□□ 1.95
VDR-203ENST00000546653 SMARCA2P51531 1590 aa27.2■■□□□ 1.94
VDR-203ENST00000546653 TRIM41Q8WV44 630 aa27.2■■□□□ 1.94
VDR-203ENST00000546653 SMARCA4P51532 1647 aa27.14■■□□□ 1.94
VDR-203ENST00000546653 KIF21AQ7Z4S6 1674 aa27.02■■□□□ 1.92
VDR-203ENST00000546653 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
VDR-203ENST00000546653 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
VDR-203ENST00000546653 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
VDR-203ENST00000546653 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
VDR-203ENST00000546653 BAZ1AQ9NRL2 1556 aaPredicted RBP26.85■■□□□ 1.89
VDR-203ENST00000546653 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
VDR-203ENST00000546653 WDR62O43379 1518 aa26.7■■□□□ 1.86
VDR-203ENST00000546653 MROH2BQ7Z745 1585 aa26.65■■□□□ 1.86
VDR-203ENST00000546653 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
VDR-203ENST00000546653 OSCARQ8IYS5 282 aa26.52■■□□□ 1.84
VDR-203ENST00000546653 CEP164Q9UPV0 1460 aa26.43■■□□□ 1.82
VDR-203ENST00000546653 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
VDR-203ENST00000546653 RIMBP3CA6NJZ7 1639 aa26.33■■□□□ 1.81
VDR-203ENST00000546653 RIMBP3BA6NNM3 1639 aa26.33■■□□□ 1.81
VDR-203ENST00000546653 RIMBP3Q9UFD9 1639 aa26.33■■□□□ 1.81
VDR-203ENST00000546653 WIZO95785 1651 aa26.31■■□□□ 1.8
VDR-203ENST00000546653 URB2Q14146 1524 aaKnown RBP26.22■■□□□ 1.79
VDR-203ENST00000546653 CFTRP13569 1480 aa26.2■■□□□ 1.78
VDR-203ENST00000546653 ARHGEF11O15085 1522 aa26.15■■□□□ 1.78
VDR-203ENST00000546653 ZNF608Q9ULD9 1512 aaPredicted RBP26.03■■□□□ 1.76
VDR-203ENST00000546653 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
VDR-203ENST00000546653 IFT140Q96RY7 1462 aa25.93■■□□□ 1.74
VDR-203ENST00000546653 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
VDR-203ENST00000546653 TRHP20396 242 aaPredicted RBP25.88■■□□□ 1.73
VDR-203ENST00000546653 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
VDR-203ENST00000546653 ARAP1Q96P48 1450 aa25.85■■□□□ 1.73
VDR-203ENST00000546653 EIF4G3O43432 1585 aaKnown RBP25.83■■□□□ 1.73
VDR-203ENST00000546653 CHD1O14646 1710 aa25.81■■□□□ 1.72
VDR-203ENST00000546653 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
VDR-203ENST00000546653 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
VDR-203ENST00000546653 AQRO60306 1485 aaKnown RBP eCLIP25.67■■□□□ 1.7
VDR-203ENST00000546653 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
VDR-203ENST00000546653 TARBP1Q13395 1621 aaKnown RBP25.65■■□□□ 1.7
VDR-203ENST00000546653 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
VDR-203ENST00000546653 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
VDR-203ENST00000546653 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
VDR-203ENST00000546653 FBLN2P98095 1184 aa25.58■■□□□ 1.69
VDR-203ENST00000546653 CLASP1Q7Z460 1538 aa25.48■■□□□ 1.67
VDR-203ENST00000546653 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
VDR-203ENST00000546653 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
VDR-203ENST00000546653 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
VDR-203ENST00000546653 SNAPC4Q5SXM2 1469 aa25.37■■□□□ 1.65
VDR-203ENST00000546653 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
VDR-203ENST00000546653 SOGA1O94964 1423 aa25.3■■□□□ 1.64
VDR-203ENST00000546653 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
VDR-203ENST00000546653 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
VDR-203ENST00000546653 MAGI1Q96QZ7 1491 aaPredicted RBP25.26■■□□□ 1.63
VDR-203ENST00000546653 GAPVD1Q14C86 1478 aa25.23■■□□□ 1.63
VDR-203ENST00000546653 SYNJ2O15056 1496 aa25.2■■□□□ 1.62
VDR-203ENST00000546653 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.62
VDR-203ENST00000546653 GRIN2BQ13224 1484 aa25.17■■□□□ 1.62
VDR-203ENST00000546653 CUX1P39880 1505 aa25.08■■□□□ 1.61
VDR-203ENST00000546653 PBRM1Q86U86 1689 aa25.08■■□□□ 1.61
VDR-203ENST00000546653 ERCC6L2Q5T890 1561 aa25.06■■□□□ 1.6
VDR-203ENST00000546653 KIF13AQ9H1H9 1805 aa24.97■■□□□ 1.59
VDR-203ENST00000546653 ABCA5Q8WWZ7 1642 aa24.93■■□□□ 1.58
VDR-203ENST00000546653 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
VDR-203ENST00000546653 GRIN2AQ12879 1464 aa24.87■■□□□ 1.57
VDR-203ENST00000546653 ABCA10Q8WWZ4 1543 aa24.86■■□□□ 1.57
VDR-203ENST00000546653 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
VDR-203ENST00000546653 NUP160Q12769 1436 aa24.83■■□□□ 1.57
VDR-203ENST00000546653 ADAMTS12P58397 1594 aa24.79■■□□□ 1.56
VDR-203ENST00000546653 ILDR1Q86SU0 546 aaPredicted RBP24.72■■□□□ 1.55
VDR-203ENST00000546653 KDM4FA0A1W2PPD8 638 aa24.7■■□□□ 1.54
VDR-203ENST00000546653 ABCC10Q5T3U5 1492 aa24.66■■□□□ 1.54
VDR-203ENST00000546653 FHAD1B1AJZ9 1412 aa24.64■■□□□ 1.54
VDR-203ENST00000546653 FAM69CQ0P6D2 419 aa24.64■■□□□ 1.54
VDR-203ENST00000546653 PRG4Q92954 1404 aaPredicted RBP24.63■■□□□ 1.53
VDR-203ENST00000546653 DIP2BQ9P265 1576 aa24.61■■□□□ 1.53
VDR-203ENST00000546653 MAPKBP1O60336 1514 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms