RNA–Protein interactions for RNA: ENST00000546582.1

TMTC1-204, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 5

Gene TMTC1, Length 464 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-204ENST00000546582 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
TMTC1-204ENST00000546582 CCDC180Q9P1Z9 1646 aa30.04■■■□□ 2.4
TMTC1-204ENST00000546582 ABCC9O60706 1549 aa29.8■■■□□ 2.36
TMTC1-204ENST00000546582 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
TMTC1-204ENST00000546582 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
TMTC1-204ENST00000546582 NACADO15069 1562 aa28.41■■■□□ 2.14
TMTC1-204ENST00000546582 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
TMTC1-204ENST00000546582 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
TMTC1-204ENST00000546582 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
TMTC1-204ENST00000546582 PABPN1Q86U42 306 aaKnown RBP eCLIP27.88■■■□□ 2.05
TMTC1-204ENST00000546582 UNC13AQ9UPW8 1703 aa27.56■■■□□ 2
TMTC1-204ENST00000546582 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
TMTC1-204ENST00000546582 BICRAQ9NZM4 1560 aa27.49■■□□□ 1.99
TMTC1-204ENST00000546582 DNAJC5BQ9UF47 199 aa27.48■■□□□ 1.99
TMTC1-204ENST00000546582 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
TMTC1-204ENST00000546582 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
TMTC1-204ENST00000546582 CC2D2AQ9P2K1 1620 aa26.83■■□□□ 1.89
TMTC1-204ENST00000546582 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
TMTC1-204ENST00000546582 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
TMTC1-204ENST00000546582 NCAPD3P42695 1498 aa26.23■■□□□ 1.79
TMTC1-204ENST00000546582 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
TMTC1-204ENST00000546582 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
TMTC1-204ENST00000546582 SMARCA2P51531 1590 aa26.2■■□□□ 1.78
TMTC1-204ENST00000546582 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
TMTC1-204ENST00000546582 HMGXB3Q12766 1538 aa26.04■■□□□ 1.76
TMTC1-204ENST00000546582 MROH2BQ7Z745 1585 aa26.01■■□□□ 1.75
TMTC1-204ENST00000546582 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
TMTC1-204ENST00000546582 ERCC6Q03468 1493 aa25.81■■□□□ 1.72
TMTC1-204ENST00000546582 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
TMTC1-204ENST00000546582 WIZO95785 1651 aa25.67■■□□□ 1.7
TMTC1-204ENST00000546582 NESP48681 1621 aa25.64■■□□□ 1.7
TMTC1-204ENST00000546582 LAMC3Q9Y6N6 1575 aa25.55■■□□□ 1.68
TMTC1-204ENST00000546582 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
TMTC1-204ENST00000546582 CADPSQ9ULU8 1353 aa25.53■■□□□ 1.68
TMTC1-204ENST00000546582 CUX2O14529 1486 aa25.52■■□□□ 1.68
TMTC1-204ENST00000546582 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
TMTC1-204ENST00000546582 CFTRP13569 1480 aa25.26■■□□□ 1.63
TMTC1-204ENST00000546582 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
TMTC1-204ENST00000546582 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
TMTC1-204ENST00000546582 KIF21AQ7Z4S6 1674 aa25.21■■□□□ 1.63
TMTC1-204ENST00000546582 THOC2Q8NI27 1593 aaKnown RBP25.21■■□□□ 1.63
TMTC1-204ENST00000546582 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
TMTC1-204ENST00000546582 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
TMTC1-204ENST00000546582 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.61
TMTC1-204ENST00000546582 WDR62O43379 1518 aa25.05■■□□□ 1.6
TMTC1-204ENST00000546582 DNAJC5Q9H3Z4 198 aa25.04■■□□□ 1.6
TMTC1-204ENST00000546582 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
TMTC1-204ENST00000546582 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
TMTC1-204ENST00000546582 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
TMTC1-204ENST00000546582 TOPBP1Q92547 1522 aa24.73■■□□□ 1.55
TMTC1-204ENST00000546582 IFT140Q96RY7 1462 aa24.7■■□□□ 1.55
TMTC1-204ENST00000546582 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
TMTC1-204ENST00000546582 OSCARQ8IYS5 282 aa24.55■■□□□ 1.52
TMTC1-204ENST00000546582 ZNF608Q9ULD9 1512 aaPredicted RBP24.52■■□□□ 1.52
TMTC1-204ENST00000546582 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
TMTC1-204ENST00000546582 SOGA1O94964 1423 aa24.51■■□□□ 1.51
TMTC1-204ENST00000546582 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
TMTC1-204ENST00000546582 AQRO60306 1485 aaKnown RBP eCLIP24.43■■□□□ 1.5
TMTC1-204ENST00000546582 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
TMTC1-204ENST00000546582 CUX1P39880 1505 aa24.42■■□□□ 1.5
TMTC1-204ENST00000546582 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.49
TMTC1-204ENST00000546582 FBLN2P98095 1184 aa24.38■■□□□ 1.49
TMTC1-204ENST00000546582 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
TMTC1-204ENST00000546582 TARBP1Q13395 1621 aaKnown RBP24.36■■□□□ 1.49
TMTC1-204ENST00000546582 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
TMTC1-204ENST00000546582 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
TMTC1-204ENST00000546582 CHMP7Q8WUX9 453 aaPredicted RBP24.25■■□□□ 1.47
TMTC1-204ENST00000546582 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
TMTC1-204ENST00000546582 GRIN2BQ13224 1484 aa24.22■■□□□ 1.47
TMTC1-204ENST00000546582 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
TMTC1-204ENST00000546582 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
TMTC1-204ENST00000546582 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
TMTC1-204ENST00000546582 MAGI1Q96QZ7 1491 aaPredicted RBP24.15■■□□□ 1.46
TMTC1-204ENST00000546582 TOP2BQ02880 1626 aa24.14■■□□□ 1.46
TMTC1-204ENST00000546582 SYNJ1O43426 1573 aa24.1■■□□□ 1.45
TMTC1-204ENST00000546582 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.45
TMTC1-204ENST00000546582 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
TMTC1-204ENST00000546582 CHD1O14646 1710 aa24.04■■□□□ 1.44
TMTC1-204ENST00000546582 ABCA5Q8WWZ7 1642 aa24■■□□□ 1.43
TMTC1-204ENST00000546582 ARHGEF11O15085 1522 aa23.98■■□□□ 1.43
TMTC1-204ENST00000546582 PBRM1Q86U86 1689 aa23.96■■□□□ 1.43
TMTC1-204ENST00000546582 CYB5RLQ6IPT4 315 aa23.94■■□□□ 1.42
TMTC1-204ENST00000546582 RIMBP3CA6NJZ7 1639 aa23.94■■□□□ 1.42
TMTC1-204ENST00000546582 RIMBP3BA6NNM3 1639 aa23.94■■□□□ 1.42
TMTC1-204ENST00000546582 RIMBP3Q9UFD9 1639 aa23.94■■□□□ 1.42
TMTC1-204ENST00000546582 FHAD1B1AJZ9 1412 aa23.91■■□□□ 1.42
TMTC1-204ENST00000546582 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
TMTC1-204ENST00000546582 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
TMTC1-204ENST00000546582 KIF27Q86VH2 1401 aa23.86■■□□□ 1.41
TMTC1-204ENST00000546582 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
TMTC1-204ENST00000546582 CLASP1Q7Z460 1538 aa23.83■■□□□ 1.41
TMTC1-204ENST00000546582 ARAP1Q96P48 1450 aa23.75■■□□□ 1.39
TMTC1-204ENST00000546582 NUP160Q12769 1436 aa23.75■■□□□ 1.39
TMTC1-204ENST00000546582 IGF1RP08069 1367 aa23.71■■□□□ 1.39
TMTC1-204ENST00000546582 CEP170Q5SW79 1584 aa23.67■■□□□ 1.38
TMTC1-204ENST00000546582 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
TMTC1-204ENST00000546582 TRHP20396 242 aaPredicted RBP23.63■■□□□ 1.37
TMTC1-204ENST00000546582 JPH4Q96JJ6 628 aa23.63■■□□□ 1.37
TMTC1-204ENST00000546582 CUL7Q14999 1698 aa23.59■■□□□ 1.37
TMTC1-204ENST00000546582 PRG4Q92954 1404 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms