RNA–Protein interactions for RNA: ENST00000546546.1

NOVA1-207, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 4

Gene NOVA1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-207ENST00000546546 NISCHQ9Y2I1 1504 aa31.55■■■□□ 2.64
NOVA1-207ENST00000546546 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
NOVA1-207ENST00000546546 ABCC9O60706 1549 aa27.68■■■□□ 2.02
NOVA1-207ENST00000546546 DCAF8L2P0C7V8 631 aa26.72■■□□□ 1.87
NOVA1-207ENST00000546546 RB1CC1Q8TDY2 1594 aa26.44■■□□□ 1.82
NOVA1-207ENST00000546546 NACADO15069 1562 aa26.37■■□□□ 1.81
NOVA1-207ENST00000546546 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
NOVA1-207ENST00000546546 MYO15BQ96JP2 1530 aa26.12■■□□□ 1.77
NOVA1-207ENST00000546546 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
NOVA1-207ENST00000546546 PABPN1Q86U42 306 aaKnown RBP eCLIP25.97■■□□□ 1.75
NOVA1-207ENST00000546546 UNC13AQ9UPW8 1703 aa25.72■■□□□ 1.71
NOVA1-207ENST00000546546 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
NOVA1-207ENST00000546546 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.69
NOVA1-207ENST00000546546 DNAJC5BQ9UF47 199 aa25.55■■□□□ 1.68
NOVA1-207ENST00000546546 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
NOVA1-207ENST00000546546 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
NOVA1-207ENST00000546546 CC2D2AQ9P2K1 1620 aa24.92■■□□□ 1.58
NOVA1-207ENST00000546546 CECR2Q9BXF3 1484 aa24.84■■□□□ 1.57
NOVA1-207ENST00000546546 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
NOVA1-207ENST00000546546 BAZ1AQ9NRL2 1556 aaPredicted RBP24.44■■□□□ 1.5
NOVA1-207ENST00000546546 ATAD2BQ9ULI0 1458 aa24.42■■□□□ 1.5
NOVA1-207ENST00000546546 NCAPD3P42695 1498 aa24.39■■□□□ 1.5
NOVA1-207ENST00000546546 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
NOVA1-207ENST00000546546 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
NOVA1-207ENST00000546546 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
NOVA1-207ENST00000546546 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
NOVA1-207ENST00000546546 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
NOVA1-207ENST00000546546 RSF1Q96T23 1441 aaPredicted RBP24.07■■□□□ 1.44
NOVA1-207ENST00000546546 WIZO95785 1651 aa24.06■■□□□ 1.44
NOVA1-207ENST00000546546 NESP48681 1621 aa23.91■■□□□ 1.42
NOVA1-207ENST00000546546 ERCC6Q03468 1493 aa23.86■■□□□ 1.41
NOVA1-207ENST00000546546 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
NOVA1-207ENST00000546546 CADPSQ9ULU8 1353 aa23.74■■□□□ 1.39
NOVA1-207ENST00000546546 LAMC3Q9Y6N6 1575 aa23.7■■□□□ 1.38
NOVA1-207ENST00000546546 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
NOVA1-207ENST00000546546 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
NOVA1-207ENST00000546546 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
NOVA1-207ENST00000546546 CUX2O14529 1486 aa23.53■■□□□ 1.36
NOVA1-207ENST00000546546 CFTRP13569 1480 aa23.52■■□□□ 1.36
NOVA1-207ENST00000546546 KIF21AQ7Z4S6 1674 aa23.48■■□□□ 1.35
NOVA1-207ENST00000546546 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.34
NOVA1-207ENST00000546546 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
NOVA1-207ENST00000546546 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
NOVA1-207ENST00000546546 MRC2Q9UBG0 1479 aa23.38■■□□□ 1.33
NOVA1-207ENST00000546546 WDR62O43379 1518 aa23.25■■□□□ 1.31
NOVA1-207ENST00000546546 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
NOVA1-207ENST00000546546 PRDM2Q13029 1718 aa23.13■■□□□ 1.29
NOVA1-207ENST00000546546 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
NOVA1-207ENST00000546546 DNAJC5Q9H3Z4 198 aa23.03■■□□□ 1.28
NOVA1-207ENST00000546546 ABCC8Q09428 1581 aa22.99■■□□□ 1.27
NOVA1-207ENST00000546546 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
NOVA1-207ENST00000546546 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
NOVA1-207ENST00000546546 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
NOVA1-207ENST00000546546 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
NOVA1-207ENST00000546546 CUX1P39880 1505 aa22.83■■□□□ 1.25
NOVA1-207ENST00000546546 SOGA1O94964 1423 aa22.82■■□□□ 1.24
NOVA1-207ENST00000546546 RAD54L2Q9Y4B4 1467 aa22.82■■□□□ 1.24
NOVA1-207ENST00000546546 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
NOVA1-207ENST00000546546 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.24
NOVA1-207ENST00000546546 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
NOVA1-207ENST00000546546 TARBP1Q13395 1621 aaKnown RBP22.72■■□□□ 1.23
NOVA1-207ENST00000546546 WRNQ14191 1432 aaPredicted RBP eCLIP22.7■■□□□ 1.22
NOVA1-207ENST00000546546 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
NOVA1-207ENST00000546546 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
NOVA1-207ENST00000546546 FBLN2P98095 1184 aa22.64■■□□□ 1.21
NOVA1-207ENST00000546546 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
NOVA1-207ENST00000546546 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
NOVA1-207ENST00000546546 ABCA10Q8WWZ4 1543 aa22.52■■□□□ 1.2
NOVA1-207ENST00000546546 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
NOVA1-207ENST00000546546 GAPVD1Q14C86 1478 aa22.51■■□□□ 1.19
NOVA1-207ENST00000546546 SNAPC4Q5SXM2 1469 aa22.51■■□□□ 1.19
NOVA1-207ENST00000546546 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
NOVA1-207ENST00000546546 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
NOVA1-207ENST00000546546 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
NOVA1-207ENST00000546546 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
NOVA1-207ENST00000546546 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.17
NOVA1-207ENST00000546546 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
NOVA1-207ENST00000546546 CHD1O14646 1710 aa22.37■■□□□ 1.17
NOVA1-207ENST00000546546 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
NOVA1-207ENST00000546546 PBRM1Q86U86 1689 aa22.33■■□□□ 1.17
NOVA1-207ENST00000546546 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
NOVA1-207ENST00000546546 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
NOVA1-207ENST00000546546 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
NOVA1-207ENST00000546546 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
NOVA1-207ENST00000546546 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
NOVA1-207ENST00000546546 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
NOVA1-207ENST00000546546 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
NOVA1-207ENST00000546546 IGF1RP08069 1367 aa22.19■■□□□ 1.14
NOVA1-207ENST00000546546 RIMBP3CA6NJZ7 1639 aa22.19■■□□□ 1.14
NOVA1-207ENST00000546546 RIMBP3BA6NNM3 1639 aa22.19■■□□□ 1.14
NOVA1-207ENST00000546546 RIMBP3Q9UFD9 1639 aa22.19■■□□□ 1.14
NOVA1-207ENST00000546546 CLASP1Q7Z460 1538 aa22.15■■□□□ 1.14
NOVA1-207ENST00000546546 NUP160Q12769 1436 aa22.09■■□□□ 1.13
NOVA1-207ENST00000546546 CEP170Q5SW79 1584 aa22.08■■□□□ 1.12
NOVA1-207ENST00000546546 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
NOVA1-207ENST00000546546 RUSC2Q8N2Y8 1516 aa22.06■■□□□ 1.12
NOVA1-207ENST00000546546 ARAP1Q96P48 1450 aa22.04■■□□□ 1.12
NOVA1-207ENST00000546546 JPH4Q96JJ6 628 aa22■■□□□ 1.11
NOVA1-207ENST00000546546 CUL7Q14999 1698 aa21.96■■□□□ 1.11
NOVA1-207ENST00000546546 ERCC6L2Q5T890 1561 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms