RNA–Protein interactions for RNA: ENST00000546508.1

LINC00609-201, long intergenic non-protein coding RNA 609, humanhuman

TSL 3 BASIC

Gene LINC00609, Length 583 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00609-201ENST00000546508 NISCHQ9Y2I1 1504 aa24.36■■□□□ 1.49
LINC00609-201ENST00000546508 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
LINC00609-201ENST00000546508 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
LINC00609-201ENST00000546508 ABCC9O60706 1549 aa20.94■□□□□ 0.94
LINC00609-201ENST00000546508 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
LINC00609-201ENST00000546508 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
LINC00609-201ENST00000546508 DCAF8L2P0C7V8 631 aa20.31■□□□□ 0.84
LINC00609-201ENST00000546508 NACADO15069 1562 aa20.24■□□□□ 0.83
LINC00609-201ENST00000546508 RB1CC1Q8TDY2 1594 aa20.24■□□□□ 0.83
LINC00609-201ENST00000546508 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
LINC00609-201ENST00000546508 DCAF1Q9Y4B6 1507 aa20.15■□□□□ 0.82
LINC00609-201ENST00000546508 UNC13AQ9UPW8 1703 aa19.8■□□□□ 0.76
LINC00609-201ENST00000546508 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
LINC00609-201ENST00000546508 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
LINC00609-201ENST00000546508 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.72
LINC00609-201ENST00000546508 SHROOM4Q9ULL8 1493 aa19.42■□□□□ 0.7
LINC00609-201ENST00000546508 EIF4G1Q04637 1599 aaKnown RBP19.08■□□□□ 0.65
LINC00609-201ENST00000546508 DNAJC5BQ9UF47 199 aa18.96■□□□□ 0.63
LINC00609-201ENST00000546508 CECR2Q9BXF3 1484 aa18.96■□□□□ 0.63
LINC00609-201ENST00000546508 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
LINC00609-201ENST00000546508 SMARCA4P51532 1647 aa18.89■□□□□ 0.62
LINC00609-201ENST00000546508 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
LINC00609-201ENST00000546508 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
LINC00609-201ENST00000546508 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
LINC00609-201ENST00000546508 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
LINC00609-201ENST00000546508 ATAD2BQ9ULI0 1458 aa18.7■□□□□ 0.58
LINC00609-201ENST00000546508 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
LINC00609-201ENST00000546508 NCAPD3P42695 1498 aa18.64■□□□□ 0.57
LINC00609-201ENST00000546508 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
LINC00609-201ENST00000546508 WIZO95785 1651 aa18.63■□□□□ 0.57
LINC00609-201ENST00000546508 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
LINC00609-201ENST00000546508 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
LINC00609-201ENST00000546508 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
LINC00609-201ENST00000546508 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
LINC00609-201ENST00000546508 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
LINC00609-201ENST00000546508 CCDC88BA6NC98 1476 aa18.19■□□□□ 0.5
LINC00609-201ENST00000546508 NESP48681 1621 aa18.18■□□□□ 0.5
LINC00609-201ENST00000546508 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
LINC00609-201ENST00000546508 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
LINC00609-201ENST00000546508 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
LINC00609-201ENST00000546508 CFTRP13569 1480 aa18.06■□□□□ 0.48
LINC00609-201ENST00000546508 PRDM2Q13029 1718 aa18.02■□□□□ 0.48
LINC00609-201ENST00000546508 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
LINC00609-201ENST00000546508 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
LINC00609-201ENST00000546508 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
LINC00609-201ENST00000546508 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
LINC00609-201ENST00000546508 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
LINC00609-201ENST00000546508 MRC2Q9UBG0 1479 aa17.84■□□□□ 0.45
LINC00609-201ENST00000546508 WDR62O43379 1518 aa17.77■□□□□ 0.43
LINC00609-201ENST00000546508 URB2Q14146 1524 aaKnown RBP17.75■□□□□ 0.43
LINC00609-201ENST00000546508 CUX2O14529 1486 aa17.75■□□□□ 0.43
LINC00609-201ENST00000546508 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
LINC00609-201ENST00000546508 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
LINC00609-201ENST00000546508 ABCC8Q09428 1581 aa17.67■□□□□ 0.42
LINC00609-201ENST00000546508 CUX1P39880 1505 aa17.62■□□□□ 0.41
LINC00609-201ENST00000546508 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
LINC00609-201ENST00000546508 SYNJ1O43426 1573 aa17.55■□□□□ 0.4
LINC00609-201ENST00000546508 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
LINC00609-201ENST00000546508 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
LINC00609-201ENST00000546508 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
LINC00609-201ENST00000546508 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
LINC00609-201ENST00000546508 IFT140Q96RY7 1462 aa17.51■□□□□ 0.39
LINC00609-201ENST00000546508 FOXD1Q16676 465 aa17.47■□□□□ 0.39
LINC00609-201ENST00000546508 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
LINC00609-201ENST00000546508 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
LINC00609-201ENST00000546508 SOGA1O94964 1423 aa17.46■□□□□ 0.39
LINC00609-201ENST00000546508 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
LINC00609-201ENST00000546508 WDR97A6NE52 1622 aa17.41■□□□□ 0.38
LINC00609-201ENST00000546508 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
LINC00609-201ENST00000546508 ABCA10Q8WWZ4 1543 aa17.36■□□□□ 0.37
LINC00609-201ENST00000546508 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.37
LINC00609-201ENST00000546508 TDRD9Q8NDG6 1382 aaKnown RBP17.34■□□□□ 0.37
LINC00609-201ENST00000546508 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
LINC00609-201ENST00000546508 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
LINC00609-201ENST00000546508 GAPVD1Q14C86 1478 aa17.28■□□□□ 0.36
LINC00609-201ENST00000546508 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
LINC00609-201ENST00000546508 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
LINC00609-201ENST00000546508 SNAPC4Q5SXM2 1469 aa17.21■□□□□ 0.35
LINC00609-201ENST00000546508 KIF27Q86VH2 1401 aa17.21■□□□□ 0.34
LINC00609-201ENST00000546508 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
LINC00609-201ENST00000546508 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
LINC00609-201ENST00000546508 CHD1O14646 1710 aa17.16■□□□□ 0.34
LINC00609-201ENST00000546508 FBLN2P98095 1184 aa17.13■□□□□ 0.33
LINC00609-201ENST00000546508 ADAMTS12P58397 1594 aa17.13■□□□□ 0.33
LINC00609-201ENST00000546508 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
LINC00609-201ENST00000546508 RUSC2Q8N2Y8 1516 aa17.1■□□□□ 0.33
LINC00609-201ENST00000546508 CUL7Q14999 1698 aa17.08■□□□□ 0.32
LINC00609-201ENST00000546508 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
LINC00609-201ENST00000546508 FHAD1B1AJZ9 1412 aa17.07■□□□□ 0.32
LINC00609-201ENST00000546508 IGF1RP08069 1367 aa17.06■□□□□ 0.32
LINC00609-201ENST00000546508 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
LINC00609-201ENST00000546508 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
LINC00609-201ENST00000546508 EEA1Q15075 1411 aa17■□□□□ 0.31
LINC00609-201ENST00000546508 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
LINC00609-201ENST00000546508 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
LINC00609-201ENST00000546508 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
LINC00609-201ENST00000546508 RAPGEF2Q9Y4G8 1499 aa16.93■□□□□ 0.3
LINC00609-201ENST00000546508 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
LINC00609-201ENST00000546508 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
LINC00609-201ENST00000546508 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms