RNA–Protein interactions for RNA: ENST00000546373.5

CPM-202, Transcript of carboxypeptidase M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPM, Length 2,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-202ENST00000546373 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
CPM-202ENST00000546373 CCDC180Q9P1Z9 1646 aa14.98□□□□□ -0.01
CPM-202ENST00000546373 ABCC9O60706 1549 aa14.67□□□□□ -0.06
CPM-202ENST00000546373 DCAF8L2P0C7V8 631 aa14.4□□□□□ -0.1
CPM-202ENST00000546373 ZCCHC6Q5VYS8 1495 aaKnown RBP14.3□□□□□ -0.12
CPM-202ENST00000546373 NACADO15069 1562 aa14.06□□□□□ -0.16
CPM-202ENST00000546373 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
CPM-202ENST00000546373 RB1CC1Q8TDY2 1594 aa14.04□□□□□ -0.16
CPM-202ENST00000546373 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
CPM-202ENST00000546373 SHROOM4Q9ULL8 1493 aa13.9□□□□□ -0.18
CPM-202ENST00000546373 SCRIBQ14160 1630 aa13.88□□□□□ -0.19
CPM-202ENST00000546373 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
CPM-202ENST00000546373 UNC13AQ9UPW8 1703 aa13.81□□□□□ -0.2
CPM-202ENST00000546373 BICRAQ9NZM4 1560 aa13.72□□□□□ -0.21
CPM-202ENST00000546373 AEBP2Q6ZN18 517 aaPredicted RBP13.69□□□□□ -0.22
CPM-202ENST00000546373 CECR2Q9BXF3 1484 aa13.43□□□□□ -0.26
CPM-202ENST00000546373 DNAJC5BQ9UF47 199 aa13.37□□□□□ -0.27
CPM-202ENST00000546373 EIF4G1Q04637 1599 aaKnown RBP13.31□□□□□ -0.28
CPM-202ENST00000546373 MROH2BQ7Z745 1585 aa13.27□□□□□ -0.28
CPM-202ENST00000546373 SMARCA4P51532 1647 aa13.22□□□□□ -0.29
CPM-202ENST00000546373 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.29
CPM-202ENST00000546373 BAZ1AQ9NRL2 1556 aaPredicted RBP13.21□□□□□ -0.3
CPM-202ENST00000546373 RSF1Q96T23 1441 aaPredicted RBP13.2□□□□□ -0.3
CPM-202ENST00000546373 SUPT5HO00267 1087 aaKnown RBP13.18□□□□□ -0.3
CPM-202ENST00000546373 WIZO95785 1651 aa13.14□□□□□ -0.31
CPM-202ENST00000546373 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
CPM-202ENST00000546373 NCAPD3P42695 1498 aa13.03□□□□□ -0.32
CPM-202ENST00000546373 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
CPM-202ENST00000546373 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
CPM-202ENST00000546373 BAZ1BQ9UIG0 1483 aaKnown RBP13.01□□□□□ -0.33
CPM-202ENST00000546373 HMGXB3Q12766 1538 aa12.94□□□□□ -0.34
CPM-202ENST00000546373 TOP2AP11388 1531 aaKnown RBP12.92□□□□□ -0.34
CPM-202ENST00000546373 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
CPM-202ENST00000546373 SLC24A1O60721 1099 aa12.88□□□□□ -0.35
CPM-202ENST00000546373 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
CPM-202ENST00000546373 NESP48681 1621 aa12.8□□□□□ -0.36
CPM-202ENST00000546373 HRCP23327 699 aa12.74□□□□□ -0.37
CPM-202ENST00000546373 CHIC1Q5VXU3 224 aa12.74□□□□□ -0.37
CPM-202ENST00000546373 CADPSQ9ULU8 1353 aa12.7□□□□□ -0.38
CPM-202ENST00000546373 CFTRP13569 1480 aa12.67□□□□□ -0.38
CPM-202ENST00000546373 LAMC3Q9Y6N6 1575 aa12.61□□□□□ -0.39
CPM-202ENST00000546373 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
CPM-202ENST00000546373 MYT1Q01538 1121 aa12.56□□□□□ -0.4
CPM-202ENST00000546373 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
CPM-202ENST00000546373 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
CPM-202ENST00000546373 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
CPM-202ENST00000546373 ABCC8Q09428 1581 aa12.52□□□□□ -0.41
CPM-202ENST00000546373 CEP164Q9UPV0 1460 aa12.49□□□□□ -0.41
CPM-202ENST00000546373 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
CPM-202ENST00000546373 URB2Q14146 1524 aaKnown RBP12.46□□□□□ -0.41
CPM-202ENST00000546373 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
CPM-202ENST00000546373 CUX1P39880 1505 aa12.42□□□□□ -0.42
CPM-202ENST00000546373 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
CPM-202ENST00000546373 WRNQ14191 1432 aaPredicted RBP eCLIP12.4□□□□□ -0.42
CPM-202ENST00000546373 SYNJ1O43426 1573 aa12.4□□□□□ -0.43
CPM-202ENST00000546373 TOPBP1Q92547 1522 aa12.39□□□□□ -0.43
CPM-202ENST00000546373 WDR62O43379 1518 aa12.36□□□□□ -0.43
CPM-202ENST00000546373 DNMBPQ6XZF7 1577 aa12.34□□□□□ -0.43
CPM-202ENST00000546373 RAD54L2Q9Y4B4 1467 aa12.33□□□□□ -0.44
CPM-202ENST00000546373 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
CPM-202ENST00000546373 FGD5Q6ZNL6 1462 aa12.33□□□□□ -0.44
CPM-202ENST00000546373 CUX2O14529 1486 aa12.32□□□□□ -0.44
CPM-202ENST00000546373 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
CPM-202ENST00000546373 TOP2BQ02880 1626 aa12.31□□□□□ -0.44
CPM-202ENST00000546373 BIVM-ERCC5R4GMW8 1640 aa12.27□□□□□ -0.44
CPM-202ENST00000546373 SOGA1O94964 1423 aa12.27□□□□□ -0.45
CPM-202ENST00000546373 ZNF608Q9ULD9 1512 aaPredicted RBP12.27□□□□□ -0.45
CPM-202ENST00000546373 TDRD9Q8NDG6 1382 aaKnown RBP12.25□□□□□ -0.45
CPM-202ENST00000546373 TARBP1Q13395 1621 aaKnown RBP12.23□□□□□ -0.45
CPM-202ENST00000546373 RUSC2Q8N2Y8 1516 aa12.23□□□□□ -0.45
CPM-202ENST00000546373 AQRO60306 1485 aaKnown RBP eCLIP12.22□□□□□ -0.45
CPM-202ENST00000546373 FAM9AQ8IZU1 332 aaPredicted RBP12.2□□□□□ -0.46
CPM-202ENST00000546373 IFT140Q96RY7 1462 aa12.19□□□□□ -0.46
CPM-202ENST00000546373 PPARGC1BQ86YN6 1023 aaKnown RBP12.19□□□□□ -0.46
CPM-202ENST00000546373 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
CPM-202ENST00000546373 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
CPM-202ENST00000546373 PCGF6Q9BYE7 350 aa12.14□□□□□ -0.47
CPM-202ENST00000546373 EIF4G3O43432 1585 aaKnown RBP12.13□□□□□ -0.47
CPM-202ENST00000546373 EHMT2Q96KQ7 1210 aa12.13□□□□□ -0.47
CPM-202ENST00000546373 GAPVD1Q14C86 1478 aa12.12□□□□□ -0.47
CPM-202ENST00000546373 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
CPM-202ENST00000546373 ABCA5Q8WWZ7 1642 aa12.09□□□□□ -0.47
CPM-202ENST00000546373 KIF27Q86VH2 1401 aa12.08□□□□□ -0.47
CPM-202ENST00000546373 IGF1RP08069 1367 aa12.08□□□□□ -0.47
CPM-202ENST00000546373 TTBK1Q5TCY1 1321 aaPredicted RBP12.06□□□□□ -0.48
CPM-202ENST00000546373 FBLN2P98095 1184 aa12.06□□□□□ -0.48
CPM-202ENST00000546373 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
CPM-202ENST00000546373 GRIN2BQ13224 1484 aa12.04□□□□□ -0.48
CPM-202ENST00000546373 PBRM1Q86U86 1689 aa12.03□□□□□ -0.48
CPM-202ENST00000546373 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
CPM-202ENST00000546373 ZEB1P37275 1124 aaPredicted RBP12.01□□□□□ -0.49
CPM-202ENST00000546373 CARMIL1Q5VZK9 1371 aa11.99□□□□□ -0.49
CPM-202ENST00000546373 ERICH3Q5RHP9 1530 aa11.99□□□□□ -0.49
CPM-202ENST00000546373 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
CPM-202ENST00000546373 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
CPM-202ENST00000546373 ADAMTS12P58397 1594 aa11.96□□□□□ -0.49
CPM-202ENST00000546373 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.49
CPM-202ENST00000546373 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
CPM-202ENST00000546373 FHAD1B1AJZ9 1412 aa11.95□□□□□ -0.5
CPM-202ENST00000546373 SYNJ2O15056 1496 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms