RNA–Protein interactions for RNA: ENST00000546318.2

IFIT1-202, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

TSL 3 BASIC

Gene IFIT1, Length 4,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-202ENST00000546318 NISCHQ9Y2I1 1504 aa14.12□□□□□ -0.15
IFIT1-202ENST00000546318 CCDC180Q9P1Z9 1646 aa12.25□□□□□ -0.45
IFIT1-202ENST00000546318 ZCCHC6Q5VYS8 1495 aaKnown RBP11.93□□□□□ -0.5
IFIT1-202ENST00000546318 SHROOM4Q9ULL8 1493 aa11.7□□□□□ -0.54
IFIT1-202ENST00000546318 DCAF1Q9Y4B6 1507 aa11.69□□□□□ -0.54
IFIT1-202ENST00000546318 DCAF8L2P0C7V8 631 aa11.55□□□□□ -0.56
IFIT1-202ENST00000546318 MYO15BQ96JP2 1530 aa11.45□□□□□ -0.58
IFIT1-202ENST00000546318 SUPT5HO00267 1087 aaKnown RBP11.39□□□□□ -0.59
IFIT1-202ENST00000546318 NACADO15069 1562 aa11.32□□□□□ -0.6
IFIT1-202ENST00000546318 SCRIBQ14160 1630 aa11.28□□□□□ -0.6
IFIT1-202ENST00000546318 ABCC9O60706 1549 aa11.26□□□□□ -0.61
IFIT1-202ENST00000546318 RB1CC1Q8TDY2 1594 aa11.17□□□□□ -0.62
IFIT1-202ENST00000546318 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
IFIT1-202ENST00000546318 CHIC1Q5VXU3 224 aa11.02□□□□□ -0.65
IFIT1-202ENST00000546318 UNC13AQ9UPW8 1703 aa10.92□□□□□ -0.66
IFIT1-202ENST00000546318 BAZ1AQ9NRL2 1556 aaPredicted RBP10.91□□□□□ -0.66
IFIT1-202ENST00000546318 CECR2Q9BXF3 1484 aa10.9□□□□□ -0.66
IFIT1-202ENST00000546318 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.66
IFIT1-202ENST00000546318 WIZO95785 1651 aa10.85□□□□□ -0.67
IFIT1-202ENST00000546318 SMARCA4P51532 1647 aa10.83□□□□□ -0.68
IFIT1-202ENST00000546318 TOP2AP11388 1531 aaKnown RBP10.78□□□□□ -0.68
IFIT1-202ENST00000546318 BICRAQ9NZM4 1560 aa10.76□□□□□ -0.69
IFIT1-202ENST00000546318 TRIM41Q8WV44 630 aa10.71□□□□□ -0.69
IFIT1-202ENST00000546318 EIF4G1Q04637 1599 aaKnown RBP10.69□□□□□ -0.7
IFIT1-202ENST00000546318 PEG3Q9GZU2 1588 aa10.67□□□□□ -0.7
IFIT1-202ENST00000546318 SMARCA2P51531 1590 aa10.66□□□□□ -0.7
IFIT1-202ENST00000546318 PABPN1Q86U42 306 aaKnown RBP eCLIP10.65□□□□□ -0.71
IFIT1-202ENST00000546318 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
IFIT1-202ENST00000546318 LOC105371045A0A1W2PR82 267 aa10.59□□□□□ -0.71
IFIT1-202ENST00000546318 BAZ1BQ9UIG0 1483 aaKnown RBP10.54□□□□□ -0.72
IFIT1-202ENST00000546318 ATAD2BQ9ULI0 1458 aa10.54□□□□□ -0.72
IFIT1-202ENST00000546318 ABCC8Q09428 1581 aa10.5□□□□□ -0.73
IFIT1-202ENST00000546318 FAM9AQ8IZU1 332 aaPredicted RBP10.5□□□□□ -0.73
IFIT1-202ENST00000546318 HMGXB3Q12766 1538 aa10.46□□□□□ -0.74
IFIT1-202ENST00000546318 PCGF6Q9BYE7 350 aa10.45□□□□□ -0.74
IFIT1-202ENST00000546318 EEA1Q15075 1411 aa10.45□□□□□ -0.74
IFIT1-202ENST00000546318 WRNQ14191 1432 aaPredicted RBP eCLIP10.42□□□□□ -0.74
IFIT1-202ENST00000546318 TRIM26Q12899 539 aaPredicted RBP10.41□□□□□ -0.74
IFIT1-202ENST00000546318 NCAPD3P42695 1498 aa10.4□□□□□ -0.74
IFIT1-202ENST00000546318 HRCP23327 699 aa10.39□□□□□ -0.75
IFIT1-202ENST00000546318 SYNJ1O43426 1573 aa10.35□□□□□ -0.75
IFIT1-202ENST00000546318 EHMT2Q96KQ7 1210 aa10.34□□□□□ -0.75
IFIT1-202ENST00000546318 SOGA1O94964 1423 aa10.33□□□□□ -0.75
IFIT1-202ENST00000546318 GOLGA3Q08378 1498 aa10.32□□□□□ -0.76
IFIT1-202ENST00000546318 TOP2BQ02880 1626 aa10.32□□□□□ -0.76
IFIT1-202ENST00000546318 BIVM-ERCC5R4GMW8 1640 aa10.31□□□□□ -0.76
IFIT1-202ENST00000546318 PRDM2Q13029 1718 aa10.31□□□□□ -0.76
IFIT1-202ENST00000546318 TNIKQ9UKE5 1360 aa10.3□□□□□ -0.76
IFIT1-202ENST00000546318 KIF21BO75037 1637 aa10.3□□□□□ -0.76
IFIT1-202ENST00000546318 CSRNP3Q8WYN3 585 aa10.29□□□□□ -0.76
IFIT1-202ENST00000546318 CEP164Q9UPV0 1460 aa10.28□□□□□ -0.76
IFIT1-202ENST00000546318 CEP162Q5TB80 1403 aa10.28□□□□□ -0.76
IFIT1-202ENST00000546318 RUSC2Q8N2Y8 1516 aa10.25□□□□□ -0.77
IFIT1-202ENST00000546318 CFTRP13569 1480 aa10.25□□□□□ -0.77
IFIT1-202ENST00000546318 CC2D2AQ9P2K1 1620 aa10.23□□□□□ -0.77
IFIT1-202ENST00000546318 UBTFP17480 764 aaKnown RBP10.22□□□□□ -0.77
IFIT1-202ENST00000546318 ZEB1P37275 1124 aaPredicted RBP10.2□□□□□ -0.78
IFIT1-202ENST00000546318 CUX1P39880 1505 aa10.19□□□□□ -0.78
IFIT1-202ENST00000546318 ERICH3Q5RHP9 1530 aa10.18□□□□□ -0.78
IFIT1-202ENST00000546318 CADPSQ9ULU8 1353 aa10.15□□□□□ -0.78
IFIT1-202ENST00000546318 KIF27Q86VH2 1401 aa10.14□□□□□ -0.79
IFIT1-202ENST00000546318 CLIP1P30622 1438 aa10.14□□□□□ -0.79
IFIT1-202ENST00000546318 RAPGEF2Q9Y4G8 1499 aa10.13□□□□□ -0.79
IFIT1-202ENST00000546318 PRXQ9BXM0 1461 aa10.1□□□□□ -0.79
IFIT1-202ENST00000546318 VPS8Q8N3P4 1428 aa10.09□□□□□ -0.79
IFIT1-202ENST00000546318 PPARGC1BQ86YN6 1023 aaKnown RBP10.08□□□□□ -0.8
IFIT1-202ENST00000546318 FANCD2Q9BXW9 1451 aa10.07□□□□□ -0.8
IFIT1-202ENST00000546318 DNMBPQ6XZF7 1577 aa10.05□□□□□ -0.8
IFIT1-202ENST00000546318 FGD5Q6ZNL6 1462 aa10.05□□□□□ -0.8
IFIT1-202ENST00000546318 LAMC3Q9Y6N6 1575 aa10.05□□□□□ -0.8
IFIT1-202ENST00000546318 APLP2Q06481 763 aa10.05□□□□□ -0.8
IFIT1-202ENST00000546318 CUX2O14529 1486 aa10.04□□□□□ -0.8
IFIT1-202ENST00000546318 TTBK1Q5TCY1 1321 aaPredicted RBP10□□□□□ -0.81
IFIT1-202ENST00000546318 ARAP1Q96P48 1450 aa9.99□□□□□ -0.81
IFIT1-202ENST00000546318 TOPBP1Q92547 1522 aa9.98□□□□□ -0.81
IFIT1-202ENST00000546318 ABCA10Q8WWZ4 1543 aa9.97□□□□□ -0.81
IFIT1-202ENST00000546318 CCER1Q8TC90 406 aaPredicted RBP9.97□□□□□ -0.81
IFIT1-202ENST00000546318 CUL7Q14999 1698 aa9.97□□□□□ -0.81
IFIT1-202ENST00000546318 IGF1RP08069 1367 aa9.96□□□□□ -0.82
IFIT1-202ENST00000546318 NESP48681 1621 aa9.96□□□□□ -0.82
IFIT1-202ENST00000546318 RANGAP1P46060 587 aaPredicted RBP9.96□□□□□ -0.82
IFIT1-202ENST00000546318 PDS5BQ9NTI5 1447 aa9.95□□□□□ -0.82
IFIT1-202ENST00000546318 CARMIL1Q5VZK9 1371 aa9.95□□□□□ -0.82
IFIT1-202ENST00000546318 POLA1P09884 1462 aaPredicted RBP9.95□□□□□ -0.82
IFIT1-202ENST00000546318 WDR97A6NE52 1622 aa9.94□□□□□ -0.82
IFIT1-202ENST00000546318 ARHGAP35Q9NRY4 1499 aa9.93□□□□□ -0.82
IFIT1-202ENST00000546318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.92□□□□□ -0.82
IFIT1-202ENST00000546318 URB2Q14146 1524 aaKnown RBP9.91□□□□□ -0.82
IFIT1-202ENST00000546318 RAD54L2Q9Y4B4 1467 aa9.91□□□□□ -0.82
IFIT1-202ENST00000546318 KIF21AQ7Z4S6 1674 aa9.9□□□□□ -0.82
IFIT1-202ENST00000546318 CTTNBP2Q8WZ74 1663 aa9.9□□□□□ -0.83
IFIT1-202ENST00000546318 EFCAB5A4FU69 1503 aa9.89□□□□□ -0.83
IFIT1-202ENST00000546318 ABCA5Q8WWZ7 1642 aa9.88□□□□□ -0.83
IFIT1-202ENST00000546318 MAP3K1Q13233 1512 aa9.87□□□□□ -0.83
IFIT1-202ENST00000546318 FHAD1B1AJZ9 1412 aa9.87□□□□□ -0.83
IFIT1-202ENST00000546318 TIAM1Q13009 1591 aa9.84□□□□□ -0.83
IFIT1-202ENST00000546318 CFAP43Q8NDM7 1665 aa9.84□□□□□ -0.83
IFIT1-202ENST00000546318 GAPVD1Q14C86 1478 aa9.83□□□□□ -0.84
IFIT1-202ENST00000546318 RRBP1Q9P2E9 1410 aaKnown RBP9.83□□□□□ -0.84
IFIT1-202ENST00000546318 HNRNPUL2Q1KMD3 747 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms