RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 AEBP2Q6ZN18 517 aaPredicted RBP25.73■■□□□ 1.71
GABRB3-205ENST00000545868 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
GABRB3-205ENST00000545868 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
GABRB3-205ENST00000545868 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
GABRB3-205ENST00000545868 CCDC180Q9P1Z9 1646 aa22.13■■□□□ 1.13
GABRB3-205ENST00000545868 ABCC9O60706 1549 aa22.06■■□□□ 1.12
GABRB3-205ENST00000545868 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
GABRB3-205ENST00000545868 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
GABRB3-205ENST00000545868 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
GABRB3-205ENST00000545868 NACADO15069 1562 aa20.83■□□□□ 0.92
GABRB3-205ENST00000545868 UNC13AQ9UPW8 1703 aa20.79■□□□□ 0.92
GABRB3-205ENST00000545868 DNAJC5BQ9UF47 199 aa20.74■□□□□ 0.91
GABRB3-205ENST00000545868 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
GABRB3-205ENST00000545868 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
GABRB3-205ENST00000545868 BICRAQ9NZM4 1560 aa20.49■□□□□ 0.87
GABRB3-205ENST00000545868 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
GABRB3-205ENST00000545868 ZCCHC6Q5VYS8 1495 aaKnown RBP20.34■□□□□ 0.85
GABRB3-205ENST00000545868 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
GABRB3-205ENST00000545868 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
GABRB3-205ENST00000545868 FOXD1Q16676 465 aa20.12■□□□□ 0.81
GABRB3-205ENST00000545868 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
GABRB3-205ENST00000545868 CC2D2AQ9P2K1 1620 aa20■□□□□ 0.79
GABRB3-205ENST00000545868 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
GABRB3-205ENST00000545868 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
GABRB3-205ENST00000545868 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
GABRB3-205ENST00000545868 ADRA2BP18089 450 aa19.72■□□□□ 0.75
GABRB3-205ENST00000545868 SMARCA4P51532 1647 aa19.21■□□□□ 0.67
GABRB3-205ENST00000545868 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
GABRB3-205ENST00000545868 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
GABRB3-205ENST00000545868 HMGXB3Q12766 1538 aa19.11■□□□□ 0.65
GABRB3-205ENST00000545868 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
GABRB3-205ENST00000545868 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
GABRB3-205ENST00000545868 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
GABRB3-205ENST00000545868 CUX2O14529 1486 aa19.02■□□□□ 0.63
GABRB3-205ENST00000545868 PEG3Q9GZU2 1588 aa19.01■□□□□ 0.63
GABRB3-205ENST00000545868 DNAJC5Q9H3Z4 198 aa19■□□□□ 0.63
GABRB3-205ENST00000545868 ERCC6Q03468 1493 aa18.99■□□□□ 0.63
GABRB3-205ENST00000545868 NESP48681 1621 aa18.99■□□□□ 0.63
GABRB3-205ENST00000545868 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
GABRB3-205ENST00000545868 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
GABRB3-205ENST00000545868 THOC2Q8NI27 1593 aaKnown RBP18.88■□□□□ 0.61
GABRB3-205ENST00000545868 KIF21AQ7Z4S6 1674 aa18.86■□□□□ 0.61
GABRB3-205ENST00000545868 LAMC3Q9Y6N6 1575 aa18.83■□□□□ 0.6
GABRB3-205ENST00000545868 WIZO95785 1651 aa18.76■□□□□ 0.59
GABRB3-205ENST00000545868 KCNA4P22459 653 aa18.62■□□□□ 0.57
GABRB3-205ENST00000545868 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
GABRB3-205ENST00000545868 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
GABRB3-205ENST00000545868 WDR62O43379 1518 aa18.54■□□□□ 0.56
GABRB3-205ENST00000545868 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.56
GABRB3-205ENST00000545868 PPP4R3CPQ6ZMV5 832 aa18.51■□□□□ 0.55
GABRB3-205ENST00000545868 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
GABRB3-205ENST00000545868 RSF1Q96T23 1441 aaPredicted RBP18.45■□□□□ 0.54
GABRB3-205ENST00000545868 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
GABRB3-205ENST00000545868 CEP164Q9UPV0 1460 aa18.43■□□□□ 0.54
GABRB3-205ENST00000545868 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
GABRB3-205ENST00000545868 CFTRP13569 1480 aa18.39■□□□□ 0.54
GABRB3-205ENST00000545868 MSH5O43196 834 aa18.32■□□□□ 0.52
GABRB3-205ENST00000545868 URB2Q14146 1524 aaKnown RBP18.32■□□□□ 0.52
GABRB3-205ENST00000545868 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
GABRB3-205ENST00000545868 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
GABRB3-205ENST00000545868 NCBP3Q53F19 620 aaKnown RBP18.11■□□□□ 0.49
GABRB3-205ENST00000545868 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
GABRB3-205ENST00000545868 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.49
GABRB3-205ENST00000545868 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
GABRB3-205ENST00000545868 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
GABRB3-205ENST00000545868 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
GABRB3-205ENST00000545868 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.48
GABRB3-205ENST00000545868 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.48
GABRB3-205ENST00000545868 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.48
GABRB3-205ENST00000545868 OSCARQ8IYS5 282 aa18.02■□□□□ 0.48
GABRB3-205ENST00000545868 TARBP1Q13395 1621 aaKnown RBP18.01■□□□□ 0.47
GABRB3-205ENST00000545868 CHD1O14646 1710 aa18.01■□□□□ 0.47
GABRB3-205ENST00000545868 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
GABRB3-205ENST00000545868 ABCC8Q09428 1581 aa17.96■□□□□ 0.46
GABRB3-205ENST00000545868 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
GABRB3-205ENST00000545868 POLA1P09884 1462 aaPredicted RBP17.89■□□□□ 0.45
GABRB3-205ENST00000545868 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
GABRB3-205ENST00000545868 CNKSR2Q8WXI2 1034 aa17.88■□□□□ 0.45
GABRB3-205ENST00000545868 AQRO60306 1485 aaKnown RBP eCLIP17.87■□□□□ 0.45
GABRB3-205ENST00000545868 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
GABRB3-205ENST00000545868 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
GABRB3-205ENST00000545868 EHMT2Q96KQ7 1210 aa17.8■□□□□ 0.44
GABRB3-205ENST00000545868 CUX1P39880 1505 aa17.78■□□□□ 0.44
GABRB3-205ENST00000545868 SLC4A1APQ9BWU0 796 aaKnown RBP17.78■□□□□ 0.44
GABRB3-205ENST00000545868 FGD5Q6ZNL6 1462 aa17.77■□□□□ 0.44
GABRB3-205ENST00000545868 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
GABRB3-205ENST00000545868 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
GABRB3-205ENST00000545868 ARAP1Q96P48 1450 aa17.73■□□□□ 0.43
GABRB3-205ENST00000545868 SOGA1O94964 1423 aa17.72■□□□□ 0.43
GABRB3-205ENST00000545868 SNAPC4Q5SXM2 1469 aa17.71■□□□□ 0.43
GABRB3-205ENST00000545868 TDRD9Q8NDG6 1382 aaKnown RBP17.71■□□□□ 0.43
GABRB3-205ENST00000545868 CLASP1Q7Z460 1538 aa17.7■□□□□ 0.42
GABRB3-205ENST00000545868 FBLN2P98095 1184 aa17.64■□□□□ 0.41
GABRB3-205ENST00000545868 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
GABRB3-205ENST00000545868 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
GABRB3-205ENST00000545868 CYB5RLQ6IPT4 315 aa17.63■□□□□ 0.41
GABRB3-205ENST00000545868 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
GABRB3-205ENST00000545868 GRIN2BQ13224 1484 aa17.61■□□□□ 0.41
GABRB3-205ENST00000545868 SYNJ2O15056 1496 aa17.57■□□□□ 0.4
GABRB3-205ENST00000545868 ABCA10Q8WWZ4 1543 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms