RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-208ENST00000545831 NISCHQ9Y2I1 1504 aa23.2■■□□□ 1.3
NPIPA1-208ENST00000545831 CCDC180Q9P1Z9 1646 aa20.36■□□□□ 0.85
NPIPA1-208ENST00000545831 ABCC9O60706 1549 aa19.5■□□□□ 0.71
NPIPA1-208ENST00000545831 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
NPIPA1-208ENST00000545831 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
NPIPA1-208ENST00000545831 DCAF1Q9Y4B6 1507 aa19.21■□□□□ 0.67
NPIPA1-208ENST00000545831 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
NPIPA1-208ENST00000545831 NACADO15069 1562 aa19.06■□□□□ 0.64
NPIPA1-208ENST00000545831 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
NPIPA1-208ENST00000545831 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
NPIPA1-208ENST00000545831 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
NPIPA1-208ENST00000545831 UNC13AQ9UPW8 1703 aa18.46■□□□□ 0.55
NPIPA1-208ENST00000545831 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
NPIPA1-208ENST00000545831 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
NPIPA1-208ENST00000545831 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.48
NPIPA1-208ENST00000545831 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
NPIPA1-208ENST00000545831 SUPT5HO00267 1087 aaKnown RBP17.91■□□□□ 0.46
NPIPA1-208ENST00000545831 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
NPIPA1-208ENST00000545831 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
NPIPA1-208ENST00000545831 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
NPIPA1-208ENST00000545831 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
NPIPA1-208ENST00000545831 WIZO95785 1651 aa17.71■□□□□ 0.43
NPIPA1-208ENST00000545831 SMARCA2P51531 1590 aa17.69■□□□□ 0.42
NPIPA1-208ENST00000545831 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
NPIPA1-208ENST00000545831 ATAD2BQ9ULI0 1458 aa17.68■□□□□ 0.42
NPIPA1-208ENST00000545831 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
NPIPA1-208ENST00000545831 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
NPIPA1-208ENST00000545831 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
NPIPA1-208ENST00000545831 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
NPIPA1-208ENST00000545831 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
NPIPA1-208ENST00000545831 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
NPIPA1-208ENST00000545831 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
NPIPA1-208ENST00000545831 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
NPIPA1-208ENST00000545831 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
NPIPA1-208ENST00000545831 CFTRP13569 1480 aa17.12■□□□□ 0.33
NPIPA1-208ENST00000545831 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
NPIPA1-208ENST00000545831 NESP48681 1621 aa17■□□□□ 0.31
NPIPA1-208ENST00000545831 CHIC1Q5VXU3 224 aa16.99■□□□□ 0.31
NPIPA1-208ENST00000545831 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
NPIPA1-208ENST00000545831 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.3
NPIPA1-208ENST00000545831 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
NPIPA1-208ENST00000545831 TRIM41Q8WV44 630 aa16.9■□□□□ 0.3
NPIPA1-208ENST00000545831 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
NPIPA1-208ENST00000545831 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
NPIPA1-208ENST00000545831 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
NPIPA1-208ENST00000545831 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
NPIPA1-208ENST00000545831 KIF21AQ7Z4S6 1674 aa16.77■□□□□ 0.28
NPIPA1-208ENST00000545831 SYNJ1O43426 1573 aa16.75■□□□□ 0.27
NPIPA1-208ENST00000545831 CUX1P39880 1505 aa16.75■□□□□ 0.27
NPIPA1-208ENST00000545831 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
NPIPA1-208ENST00000545831 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
NPIPA1-208ENST00000545831 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
NPIPA1-208ENST00000545831 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
NPIPA1-208ENST00000545831 TOPBP1Q92547 1522 aa16.7■□□□□ 0.26
NPIPA1-208ENST00000545831 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
NPIPA1-208ENST00000545831 FGD5Q6ZNL6 1462 aa16.63■□□□□ 0.25
NPIPA1-208ENST00000545831 WDR62O43379 1518 aa16.61■□□□□ 0.25
NPIPA1-208ENST00000545831 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
NPIPA1-208ENST00000545831 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
NPIPA1-208ENST00000545831 SOGA1O94964 1423 aa16.58■□□□□ 0.24
NPIPA1-208ENST00000545831 EEA1Q15075 1411 aa16.54■□□□□ 0.24
NPIPA1-208ENST00000545831 FAM9AQ8IZU1 332 aaPredicted RBP16.54■□□□□ 0.24
NPIPA1-208ENST00000545831 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.23
NPIPA1-208ENST00000545831 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
NPIPA1-208ENST00000545831 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
NPIPA1-208ENST00000545831 CUX2O14529 1486 aa16.49■□□□□ 0.23
NPIPA1-208ENST00000545831 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
NPIPA1-208ENST00000545831 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
NPIPA1-208ENST00000545831 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
NPIPA1-208ENST00000545831 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
NPIPA1-208ENST00000545831 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
NPIPA1-208ENST00000545831 WDR97A6NE52 1622 aa16.4■□□□□ 0.22
NPIPA1-208ENST00000545831 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
NPIPA1-208ENST00000545831 IGF1RP08069 1367 aa16.36■□□□□ 0.21
NPIPA1-208ENST00000545831 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
NPIPA1-208ENST00000545831 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
NPIPA1-208ENST00000545831 ZNF608Q9ULD9 1512 aaPredicted RBP16.34■□□□□ 0.21
NPIPA1-208ENST00000545831 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
NPIPA1-208ENST00000545831 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
NPIPA1-208ENST00000545831 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
NPIPA1-208ENST00000545831 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
NPIPA1-208ENST00000545831 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
NPIPA1-208ENST00000545831 PRXQ9BXM0 1461 aa16.28■□□□□ 0.2
NPIPA1-208ENST00000545831 EIF4G3O43432 1585 aaKnown RBP16.27■□□□□ 0.2
NPIPA1-208ENST00000545831 KIF21BO75037 1637 aa16.27■□□□□ 0.19
NPIPA1-208ENST00000545831 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
NPIPA1-208ENST00000545831 CUL7Q14999 1698 aa16.24■□□□□ 0.19
NPIPA1-208ENST00000545831 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
NPIPA1-208ENST00000545831 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
NPIPA1-208ENST00000545831 RAPGEF2Q9Y4G8 1499 aa16.23■□□□□ 0.19
NPIPA1-208ENST00000545831 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
NPIPA1-208ENST00000545831 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
NPIPA1-208ENST00000545831 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
NPIPA1-208ENST00000545831 TNIKQ9UKE5 1360 aa16.16■□□□□ 0.18
NPIPA1-208ENST00000545831 ADAMTS12P58397 1594 aa16.16■□□□□ 0.18
NPIPA1-208ENST00000545831 CHMP7Q8WUX9 453 aaPredicted RBP16.15■□□□□ 0.18
NPIPA1-208ENST00000545831 SYNJ2O15056 1496 aa16.12■□□□□ 0.17
NPIPA1-208ENST00000545831 FBLN2P98095 1184 aa16.12■□□□□ 0.17
NPIPA1-208ENST00000545831 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
NPIPA1-208ENST00000545831 CEP162Q5TB80 1403 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms