RNA–Protein interactions for RNA: ENST00000544755.1

PDCD2-212, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-212ENST00000544755 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
PDCD2-212ENST00000544755 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
PDCD2-212ENST00000544755 ABCC9O60706 1549 aa32.06■■■□□ 2.72
PDCD2-212ENST00000544755 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
PDCD2-212ENST00000544755 NACADO15069 1562 aa31.01■■■□□ 2.56
PDCD2-212ENST00000544755 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
PDCD2-212ENST00000544755 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
PDCD2-212ENST00000544755 DCAF8L2P0C7V8 631 aa30.75■■■□□ 2.51
PDCD2-212ENST00000544755 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
PDCD2-212ENST00000544755 UNC13AQ9UPW8 1703 aa30.25■■■□□ 2.43
PDCD2-212ENST00000544755 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
PDCD2-212ENST00000544755 SCRIBQ14160 1630 aa29.95■■■□□ 2.38
PDCD2-212ENST00000544755 SHROOM4Q9ULL8 1493 aa29.9■■■□□ 2.38
PDCD2-212ENST00000544755 PABPN1Q86U42 306 aaKnown RBP eCLIP29.87■■■□□ 2.37
PDCD2-212ENST00000544755 DNAJC5BQ9UF47 199 aa29.27■■■□□ 2.28
PDCD2-212ENST00000544755 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
PDCD2-212ENST00000544755 CC2D2AQ9P2K1 1620 aa29.08■■■□□ 2.25
PDCD2-212ENST00000544755 CECR2Q9BXF3 1484 aa28.87■■■□□ 2.21
PDCD2-212ENST00000544755 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
PDCD2-212ENST00000544755 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
PDCD2-212ENST00000544755 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
PDCD2-212ENST00000544755 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
PDCD2-212ENST00000544755 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
PDCD2-212ENST00000544755 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
PDCD2-212ENST00000544755 HMGXB3Q12766 1538 aa28.47■■■□□ 2.15
PDCD2-212ENST00000544755 MROH2BQ7Z745 1585 aa28.43■■■□□ 2.14
PDCD2-212ENST00000544755 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
PDCD2-212ENST00000544755 WIZO95785 1651 aa28.14■■■□□ 2.1
PDCD2-212ENST00000544755 RSF1Q96T23 1441 aaPredicted RBP28.13■■■□□ 2.09
PDCD2-212ENST00000544755 TOP2AP11388 1531 aaKnown RBP27.93■■■□□ 2.06
PDCD2-212ENST00000544755 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
PDCD2-212ENST00000544755 ERCC6Q03468 1493 aa27.73■■■□□ 2.03
PDCD2-212ENST00000544755 NESP48681 1621 aa27.71■■■□□ 2.03
PDCD2-212ENST00000544755 CADPSQ9ULU8 1353 aa27.69■■■□□ 2.02
PDCD2-212ENST00000544755 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.02
PDCD2-212ENST00000544755 CFTRP13569 1480 aa27.55■■■□□ 2
PDCD2-212ENST00000544755 CCDC88BA6NC98 1476 aa27.51■■■□□ 2
PDCD2-212ENST00000544755 CUX2O14529 1486 aa27.5■■□□□ 1.99
PDCD2-212ENST00000544755 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
PDCD2-212ENST00000544755 PRDM2Q13029 1718 aa27.47■■□□□ 1.99
PDCD2-212ENST00000544755 THOC2Q8NI27 1593 aaKnown RBP27.42■■□□□ 1.98
PDCD2-212ENST00000544755 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
PDCD2-212ENST00000544755 FANCD2Q9BXW9 1451 aa27.37■■□□□ 1.97
PDCD2-212ENST00000544755 SUPT5HO00267 1087 aaKnown RBP27.34■■□□□ 1.97
PDCD2-212ENST00000544755 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
PDCD2-212ENST00000544755 WDR62O43379 1518 aa27.24■■□□□ 1.95
PDCD2-212ENST00000544755 ABCC8Q09428 1581 aa27.08■■□□□ 1.93
PDCD2-212ENST00000544755 URB2Q14146 1524 aaKnown RBP27.05■■□□□ 1.92
PDCD2-212ENST00000544755 DNMBPQ6XZF7 1577 aa26.96■■□□□ 1.91
PDCD2-212ENST00000544755 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
PDCD2-212ENST00000544755 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
PDCD2-212ENST00000544755 CUX1P39880 1505 aa26.7■■□□□ 1.86
PDCD2-212ENST00000544755 POLA1P09884 1462 aaPredicted RBP26.69■■□□□ 1.86
PDCD2-212ENST00000544755 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
PDCD2-212ENST00000544755 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
PDCD2-212ENST00000544755 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
PDCD2-212ENST00000544755 SOGA1O94964 1423 aa26.58■■□□□ 1.85
PDCD2-212ENST00000544755 WRNQ14191 1432 aaPredicted RBP eCLIP26.57■■□□□ 1.84
PDCD2-212ENST00000544755 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
PDCD2-212ENST00000544755 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
PDCD2-212ENST00000544755 TOP2BQ02880 1626 aa26.55■■□□□ 1.84
PDCD2-212ENST00000544755 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
PDCD2-212ENST00000544755 DNAJC5Q9H3Z4 198 aa26.51■■□□□ 1.83
PDCD2-212ENST00000544755 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
PDCD2-212ENST00000544755 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
PDCD2-212ENST00000544755 ABCA10Q8WWZ4 1543 aa26.42■■□□□ 1.82
PDCD2-212ENST00000544755 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.829e-7■■■■■ 36.8
PDCD2-212ENST00000544755 TDRD9Q8NDG6 1382 aaKnown RBP26.35■■□□□ 1.81
PDCD2-212ENST00000544755 GRIN2BQ13224 1484 aa26.33■■□□□ 1.81
PDCD2-212ENST00000544755 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
PDCD2-212ENST00000544755 GAPVD1Q14C86 1478 aa26.3■■□□□ 1.8
PDCD2-212ENST00000544755 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
PDCD2-212ENST00000544755 OSCARQ8IYS5 282 aa26.29■■□□□ 1.8
PDCD2-212ENST00000544755 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
PDCD2-212ENST00000544755 SNAPC4Q5SXM2 1469 aa26.22■■□□□ 1.79
PDCD2-212ENST00000544755 CHD1O14646 1710 aa26.21■■□□□ 1.79
PDCD2-212ENST00000544755 ERICH3Q5RHP9 1530 aa26.15■■□□□ 1.78
PDCD2-212ENST00000544755 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
PDCD2-212ENST00000544755 FBLN2P98095 1184 aa26.09■■□□□ 1.77
PDCD2-212ENST00000544755 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
PDCD2-212ENST00000544755 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
PDCD2-212ENST00000544755 ADAMTS12P58397 1594 aa26.05■■□□□ 1.76
PDCD2-212ENST00000544755 FHAD1B1AJZ9 1412 aa26.03■■□□□ 1.76
PDCD2-212ENST00000544755 GRIN2AQ12879 1464 aa25.97■■□□□ 1.75
PDCD2-212ENST00000544755 CUL7Q14999 1698 aa25.95■■□□□ 1.74
PDCD2-212ENST00000544755 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
PDCD2-212ENST00000544755 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
PDCD2-212ENST00000544755 IGF1RP08069 1367 aa25.85■■□□□ 1.73
PDCD2-212ENST00000544755 ARHGEF11O15085 1522 aa25.85■■□□□ 1.73
PDCD2-212ENST00000544755 NUP160Q12769 1436 aa25.85■■□□□ 1.73
PDCD2-212ENST00000544755 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
PDCD2-212ENST00000544755 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
PDCD2-212ENST00000544755 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
PDCD2-212ENST00000544755 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
PDCD2-212ENST00000544755 CARMIL1Q5VZK9 1371 aa25.74■■□□□ 1.71
PDCD2-212ENST00000544755 SHROOM2Q13796 1616 aa25.69■■□□□ 1.7
PDCD2-212ENST00000544755 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
PDCD2-212ENST00000544755 EEA1Q15075 1411 aa25.65■■□□□ 1.7
PDCD2-212ENST00000544755 RAPGEF2Q9Y4G8 1499 aa25.63■■□□□ 1.69
PDCD2-212ENST00000544755 KIAA0586Q9BVV6 1533 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms