RNA–Protein interactions for RNA: ENST00000544553.1

AP001453.2-201, humanhuman

TSL 2 BASIC

Gene AP001453.2, Length 391 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001453.2-201ENST00000544553 NISCHQ9Y2I1 1504 aa29.87■■■□□ 2.37
AP001453.2-201ENST00000544553 CCDC180Q9P1Z9 1646 aa26.25■■□□□ 1.79
AP001453.2-201ENST00000544553 ABCC9O60706 1549 aa25.51■■□□□ 1.67
AP001453.2-201ENST00000544553 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
AP001453.2-201ENST00000544553 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
AP001453.2-201ENST00000544553 NACADO15069 1562 aa24.6■■□□□ 1.53
AP001453.2-201ENST00000544553 DCAF1Q9Y4B6 1507 aa24.58■■□□□ 1.53
AP001453.2-201ENST00000544553 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
AP001453.2-201ENST00000544553 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
AP001453.2-201ENST00000544553 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
AP001453.2-201ENST00000544553 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
AP001453.2-201ENST00000544553 UNC13AQ9UPW8 1703 aa24.08■■□□□ 1.45
AP001453.2-201ENST00000544553 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
AP001453.2-201ENST00000544553 BICRAQ9NZM4 1560 aa23.84■■□□□ 1.41
AP001453.2-201ENST00000544553 CECR2Q9BXF3 1484 aa23.34■■□□□ 1.33
AP001453.2-201ENST00000544553 EIF4G1Q04637 1599 aaKnown RBP23.17■■□□□ 1.3
AP001453.2-201ENST00000544553 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
AP001453.2-201ENST00000544553 SMARCA4P51532 1647 aa23.1■■□□□ 1.29
AP001453.2-201ENST00000544553 BAZ1AQ9NRL2 1556 aaPredicted RBP23.09■■□□□ 1.29
AP001453.2-201ENST00000544553 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
AP001453.2-201ENST00000544553 SUPT5HO00267 1087 aaKnown RBP23.01■■□□□ 1.27
AP001453.2-201ENST00000544553 CC2D2AQ9P2K1 1620 aa23■■□□□ 1.27
AP001453.2-201ENST00000544553 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
AP001453.2-201ENST00000544553 WIZO95785 1651 aa22.92■■□□□ 1.26
AP001453.2-201ENST00000544553 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
AP001453.2-201ENST00000544553 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
AP001453.2-201ENST00000544553 PEG3Q9GZU2 1588 aa22.74■■□□□ 1.23
AP001453.2-201ENST00000544553 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
AP001453.2-201ENST00000544553 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
AP001453.2-201ENST00000544553 HMGXB3Q12766 1538 aa22.61■■□□□ 1.21
AP001453.2-201ENST00000544553 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
AP001453.2-201ENST00000544553 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
AP001453.2-201ENST00000544553 NESP48681 1621 aa22.21■■□□□ 1.15
AP001453.2-201ENST00000544553 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
AP001453.2-201ENST00000544553 CFTRP13569 1480 aa22.06■■□□□ 1.12
AP001453.2-201ENST00000544553 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
AP001453.2-201ENST00000544553 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
AP001453.2-201ENST00000544553 PDS5BQ9NTI5 1447 aa21.91■■□□□ 1.1
AP001453.2-201ENST00000544553 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
AP001453.2-201ENST00000544553 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
AP001453.2-201ENST00000544553 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
AP001453.2-201ENST00000544553 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
AP001453.2-201ENST00000544553 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
AP001453.2-201ENST00000544553 MRC2Q9UBG0 1479 aa21.68■■□□□ 1.06
AP001453.2-201ENST00000544553 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
AP001453.2-201ENST00000544553 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
AP001453.2-201ENST00000544553 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
AP001453.2-201ENST00000544553 CUX1P39880 1505 aa21.64■■□□□ 1.05
AP001453.2-201ENST00000544553 THOC2Q8NI27 1593 aaKnown RBP21.63■■□□□ 1.05
AP001453.2-201ENST00000544553 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
AP001453.2-201ENST00000544553 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
AP001453.2-201ENST00000544553 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
AP001453.2-201ENST00000544553 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
AP001453.2-201ENST00000544553 WDR62O43379 1518 aa21.55■■□□□ 1.04
AP001453.2-201ENST00000544553 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
AP001453.2-201ENST00000544553 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
AP001453.2-201ENST00000544553 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
AP001453.2-201ENST00000544553 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.03
AP001453.2-201ENST00000544553 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
AP001453.2-201ENST00000544553 SOGA1O94964 1423 aa21.42■■□□□ 1.02
AP001453.2-201ENST00000544553 CUX2O14529 1486 aa21.4■■□□□ 1.02
AP001453.2-201ENST00000544553 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
AP001453.2-201ENST00000544553 IFT140Q96RY7 1462 aa21.31■■□□□ 1
AP001453.2-201ENST00000544553 TARBP1Q13395 1621 aaKnown RBP21.3■■□□□ 1
AP001453.2-201ENST00000544553 TDRD9Q8NDG6 1382 aaKnown RBP21.3■■□□□ 1
AP001453.2-201ENST00000544553 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
AP001453.2-201ENST00000544553 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.99
AP001453.2-201ENST00000544553 RUSC2Q8N2Y8 1516 aa21.25■□□□□ 0.99
AP001453.2-201ENST00000544553 ABCA10Q8WWZ4 1543 aa21.23■□□□□ 0.99
AP001453.2-201ENST00000544553 WDR97A6NE52 1622 aa21.22■□□□□ 0.99
AP001453.2-201ENST00000544553 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
AP001453.2-201ENST00000544553 EIF4G3O43432 1585 aaKnown RBP21.15■□□□□ 0.98
AP001453.2-201ENST00000544553 GAPVD1Q14C86 1478 aa21.15■□□□□ 0.98
AP001453.2-201ENST00000544553 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
AP001453.2-201ENST00000544553 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
AP001453.2-201ENST00000544553 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
AP001453.2-201ENST00000544553 CSRNP3Q8WYN3 585 aa21.05■□□□□ 0.96
AP001453.2-201ENST00000544553 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
AP001453.2-201ENST00000544553 IGF1RP08069 1367 aa21.04■□□□□ 0.96
AP001453.2-201ENST00000544553 FBLN2P98095 1184 aa21.02■□□□□ 0.96
AP001453.2-201ENST00000544553 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
AP001453.2-201ENST00000544553 EEA1Q15075 1411 aa20.96■□□□□ 0.95
AP001453.2-201ENST00000544553 ERICH3Q5RHP9 1530 aa20.96■□□□□ 0.95
AP001453.2-201ENST00000544553 CARMIL1Q5VZK9 1371 aa20.95■□□□□ 0.94
AP001453.2-201ENST00000544553 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
AP001453.2-201ENST00000544553 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.94
AP001453.2-201ENST00000544553 LOC105371045A0A1W2PR82 267 aa20.89■□□□□ 0.93
AP001453.2-201ENST00000544553 ADAMTS12P58397 1594 aa20.89■□□□□ 0.93
AP001453.2-201ENST00000544553 FHAD1B1AJZ9 1412 aa20.88■□□□□ 0.93
AP001453.2-201ENST00000544553 CUL7Q14999 1698 aa20.86■□□□□ 0.93
AP001453.2-201ENST00000544553 CHD1O14646 1710 aa20.84■□□□□ 0.93
AP001453.2-201ENST00000544553 SYNJ2O15056 1496 aa20.84■□□□□ 0.93
AP001453.2-201ENST00000544553 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
AP001453.2-201ENST00000544553 PRXQ9BXM0 1461 aa20.83■□□□□ 0.93
AP001453.2-201ENST00000544553 UBTFP17480 764 aaKnown RBP20.81■□□□□ 0.92
AP001453.2-201ENST00000544553 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
AP001453.2-201ENST00000544553 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
AP001453.2-201ENST00000544553 KIF21BO75037 1637 aa20.76■□□□□ 0.91
AP001453.2-201ENST00000544553 GOLGA3Q08378 1498 aa20.73■□□□□ 0.91
AP001453.2-201ENST00000544553 CEP170Q5SW79 1584 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms