RNA–Protein interactions for RNA: ENST00000544487.5

CCDC189-207, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 2,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-207ENST00000544487 NISCHQ9Y2I1 1504 aa45.36■■■■■ 4.85
CCDC189-207ENST00000544487 CCDC180Q9P1Z9 1646 aa39.01■■■■□ 3.84
CCDC189-207ENST00000544487 ZCCHC6Q5VYS8 1495 aaKnown RBP38.26■■■■□ 3.71
CCDC189-207ENST00000544487 SHROOM4Q9ULL8 1493 aa37.96■■■■□ 3.67
CCDC189-207ENST00000544487 DCAF8L2P0C7V8 631 aa37.57■■■■□ 3.6
CCDC189-207ENST00000544487 DCAF1Q9Y4B6 1507 aa37.33■■■■□ 3.57
CCDC189-207ENST00000544487 SUPT5HO00267 1087 aaKnown RBP36.91■■■■□ 3.5
CCDC189-207ENST00000544487 MYO15BQ96JP2 1530 aa36.52■■■■□ 3.44
CCDC189-207ENST00000544487 ABCC9O60706 1549 aa36.49■■■■□ 3.43
CCDC189-207ENST00000544487 SCRIBQ14160 1630 aa36.29■■■■□ 3.4
CCDC189-207ENST00000544487 NACADO15069 1562 aa36.18■■■■□ 3.38
CCDC189-207ENST00000544487 RB1CC1Q8TDY2 1594 aa35.72■■■■□ 3.31
CCDC189-207ENST00000544487 CHIC1Q5VXU3 224 aa35.63■■■■□ 3.29
CCDC189-207ENST00000544487 RSF1Q96T23 1441 aaPredicted RBP35.59■■■■□ 3.29
CCDC189-207ENST00000544487 CECR2Q9BXF3 1484 aa35.34■■■■□ 3.25
CCDC189-207ENST00000544487 MROH2BQ7Z745 1585 aa35.19■■■■□ 3.22
CCDC189-207ENST00000544487 UNC13AQ9UPW8 1703 aa35.16■■■■□ 3.22
CCDC189-207ENST00000544487 WIZO95785 1651 aa34.97■■■■□ 3.19
CCDC189-207ENST00000544487 BAZ1AQ9NRL2 1556 aaPredicted RBP34.92■■■■□ 3.18
CCDC189-207ENST00000544487 BICRAQ9NZM4 1560 aa34.73■■■■□ 3.15
CCDC189-207ENST00000544487 SMARCA4P51532 1647 aa34.71■■■■□ 3.15
CCDC189-207ENST00000544487 PABPN1Q86U42 306 aaKnown RBP eCLIP34.69■■■■□ 3.14
CCDC189-207ENST00000544487 TRIM41Q8WV44 630 aa34.51■■■■□ 3.11
CCDC189-207ENST00000544487 TOP2AP11388 1531 aaKnown RBP34.48■■■■□ 3.11
CCDC189-207ENST00000544487 LOC105371045A0A1W2PR82 267 aa34.46■■■■□ 3.11
CCDC189-207ENST00000544487 EIF4G1Q04637 1599 aaKnown RBP34.27■■■■□ 3.08
CCDC189-207ENST00000544487 CCDC88BA6NC98 1476 aa34.25■■■■□ 3.07
CCDC189-207ENST00000544487 SMARCA2P51531 1590 aa34.24■■■■□ 3.07
CCDC189-207ENST00000544487 PEG3Q9GZU2 1588 aa34.14■■■■□ 3.06
CCDC189-207ENST00000544487 FAM9AQ8IZU1 332 aaPredicted RBP34.09■■■■□ 3.05
CCDC189-207ENST00000544487 ATAD2BQ9ULI0 1458 aa33.95■■■■□ 3.02
CCDC189-207ENST00000544487 ABCC8Q09428 1581 aa33.9■■■■□ 3.02
CCDC189-207ENST00000544487 BAZ1BQ9UIG0 1483 aaKnown RBP33.82■■■■□ 3
CCDC189-207ENST00000544487 PCGF6Q9BYE7 350 aa33.76■■■■□ 3
CCDC189-207ENST00000544487 EHMT2Q96KQ7 1210 aa33.74■■■□□ 2.99
CCDC189-207ENST00000544487 WRNQ14191 1432 aaPredicted RBP eCLIP33.46■■■□□ 2.95
CCDC189-207ENST00000544487 NCAPD3P42695 1498 aa33.44■■■□□ 2.94
CCDC189-207ENST00000544487 SOGA1O94964 1423 aa33.43■■■□□ 2.94
CCDC189-207ENST00000544487 HMGXB3Q12766 1538 aa33.42■■■□□ 2.94
CCDC189-207ENST00000544487 TRIM26Q12899 539 aaPredicted RBP33.37■■■□□ 2.93
CCDC189-207ENST00000544487 HRCP23327 699 aa33.34■■■□□ 2.93
CCDC189-207ENST00000544487 SYNJ1O43426 1573 aa33.33■■■□□ 2.93
CCDC189-207ENST00000544487 RUSC2Q8N2Y8 1516 aa33.29■■■□□ 2.92
CCDC189-207ENST00000544487 EEA1Q15075 1411 aa33.26■■■□□ 2.92
CCDC189-207ENST00000544487 CSRNP3Q8WYN3 585 aa33.19■■■□□ 2.9
CCDC189-207ENST00000544487 TOP2BQ02880 1626 aa33.03■■■□□ 2.88
CCDC189-207ENST00000544487 TNIKQ9UKE5 1360 aa33.01■■■□□ 2.87
CCDC189-207ENST00000544487 CEP162Q5TB80 1403 aa32.99■■■□□ 2.87
CCDC189-207ENST00000544487 CFTRP13569 1480 aa32.97■■■□□ 2.87
CCDC189-207ENST00000544487 GOLGA3Q08378 1498 aa32.96■■■□□ 2.87
CCDC189-207ENST00000544487 BIVM-ERCC5R4GMW8 1640 aa32.95■■■□□ 2.87
CCDC189-207ENST00000544487 UBTFP17480 764 aaKnown RBP32.95■■■□□ 2.86
CCDC189-207ENST00000544487 CC2D2AQ9P2K1 1620 aa32.94■■■□□ 2.86
CCDC189-207ENST00000544487 PPARGC1BQ86YN6 1023 aaKnown RBP32.9■■■□□ 2.86
CCDC189-207ENST00000544487 CEP164Q9UPV0 1460 aa32.86■■■□□ 2.85
CCDC189-207ENST00000544487 KIF21BO75037 1637 aa32.86■■■□□ 2.85
CCDC189-207ENST00000544487 CUX1P39880 1505 aa32.82■■■□□ 2.84
CCDC189-207ENST00000544487 PRDM2Q13029 1718 aa32.77■■■□□ 2.84
CCDC189-207ENST00000544487 CADPSQ9ULU8 1353 aa32.71■■■□□ 2.83
CCDC189-207ENST00000544487 RAPGEF2Q9Y4G8 1499 aa32.67■■■□□ 2.82
CCDC189-207ENST00000544487 CLIP1P30622 1438 aa32.53■■■□□ 2.8
CCDC189-207ENST00000544487 KIF27Q86VH2 1401 aa32.5■■■□□ 2.79
CCDC189-207ENST00000544487 TTBK1Q5TCY1 1321 aaPredicted RBP32.5■■■□□ 2.79
CCDC189-207ENST00000544487 PRXQ9BXM0 1461 aa32.49■■■□□ 2.79
CCDC189-207ENST00000544487 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
CCDC189-207ENST00000544487 FANCD2Q9BXW9 1451 aa32.39■■■□□ 2.78
CCDC189-207ENST00000544487 RANGAP1P46060 587 aaPredicted RBP32.38■■■□□ 2.77
CCDC189-207ENST00000544487 ZEB1P37275 1124 aaPredicted RBP32.35■■■□□ 2.77
CCDC189-207ENST00000544487 FGD5Q6ZNL6 1462 aa32.33■■■□□ 2.77
CCDC189-207ENST00000544487 NESP48681 1621 aa32.32■■■□□ 2.76
CCDC189-207ENST00000544487 VPS8Q8N3P4 1428 aa32.32■■■□□ 2.76
CCDC189-207ENST00000544487 CUX2O14529 1486 aa32.3■■■□□ 2.76
CCDC189-207ENST00000544487 IGF1RP08069 1367 aa32.18■■■□□ 2.74
CCDC189-207ENST00000544487 DNMBPQ6XZF7 1577 aa32.17■■■□□ 2.74
CCDC189-207ENST00000544487 LAMC3Q9Y6N6 1575 aa32.15■■■□□ 2.74
CCDC189-207ENST00000544487 DNAJC5BQ9UF47 199 aa32.12■■■□□ 2.73
CCDC189-207ENST00000544487 TOPBP1Q92547 1522 aa32.12■■■□□ 2.73
CCDC189-207ENST00000544487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.11■■■□□ 2.73
CCDC189-207ENST00000544487 ARAP1Q96P48 1450 aa32.1■■■□□ 2.73
CCDC189-207ENST00000544487 APLP2Q06481 763 aa32.08■■■□□ 2.73
CCDC189-207ENST00000544487 POLA1P09884 1462 aaPredicted RBP32.05■■■□□ 2.72
CCDC189-207ENST00000544487 RAD54L2Q9Y4B4 1467 aa32.05■■■□□ 2.72
CCDC189-207ENST00000544487 CARMIL1Q5VZK9 1371 aa32.03■■■□□ 2.72
CCDC189-207ENST00000544487 CCER1Q8TC90 406 aaPredicted RBP32.01■■■□□ 2.71
CCDC189-207ENST00000544487 ABCA10Q8WWZ4 1543 aa31.98■■■□□ 2.71
CCDC189-207ENST00000544487 URB2Q14146 1524 aaKnown RBP31.96■■■□□ 2.71
CCDC189-207ENST00000544487 ARHGAP35Q9NRY4 1499 aa31.94■■■□□ 2.7
CCDC189-207ENST00000544487 PDS5BQ9NTI5 1447 aa31.92■■■□□ 2.7
CCDC189-207ENST00000544487 KIF21AQ7Z4S6 1674 aa31.84■■■□□ 2.69
CCDC189-207ENST00000544487 WDR97A6NE52 1622 aa31.79■■■□□ 2.68
CCDC189-207ENST00000544487 HNRNPUL2Q1KMD3 747 aaKnown RBP31.76■■■□□ 2.68
CCDC189-207ENST00000544487 KANK4Q5T7N3 995 aaPredicted RBP31.75■■■□□ 2.67
CCDC189-207ENST00000544487 CUL7Q14999 1698 aa31.74■■■□□ 2.67
CCDC189-207ENST00000544487 TDRD9Q8NDG6 1382 aaKnown RBP31.68■■■□□ 2.66
CCDC189-207ENST00000544487 ABCA5Q8WWZ7 1642 aa31.66■■■□□ 2.66
CCDC189-207ENST00000544487 GAPVD1Q14C86 1478 aa31.61■■■□□ 2.65
CCDC189-207ENST00000544487 CTTNBP2Q8WZ74 1663 aa31.56■■■□□ 2.64
CCDC189-207ENST00000544487 TARBP1Q13395 1621 aaKnown RBP31.55■■■□□ 2.64
CCDC189-207ENST00000544487 P3H3Q8IVL6 736 aa31.55■■■□□ 2.64
CCDC189-207ENST00000544487 TIAM1Q13009 1591 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms