RNA–Protein interactions for RNA: ENST00000544231.1

SSPN-208, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 572 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-208ENST00000544231 NISCHQ9Y2I1 1504 aa34.61■■■■□ 3.13
SSPN-208ENST00000544231 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
SSPN-208ENST00000544231 ABCC9O60706 1549 aa29.5■■■□□ 2.31
SSPN-208ENST00000544231 ZCCHC6Q5VYS8 1495 aaKnown RBP28.93■■■□□ 2.22
SSPN-208ENST00000544231 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
SSPN-208ENST00000544231 DCAF1Q9Y4B6 1507 aa28.69■■■□□ 2.18
SSPN-208ENST00000544231 NACADO15069 1562 aa28.69■■■□□ 2.18
SSPN-208ENST00000544231 MYO15BQ96JP2 1530 aa28.67■■■□□ 2.18
SSPN-208ENST00000544231 RB1CC1Q8TDY2 1594 aa28.61■■■□□ 2.17
SSPN-208ENST00000544231 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
SSPN-208ENST00000544231 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
SSPN-208ENST00000544231 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
SSPN-208ENST00000544231 PABPN1Q86U42 306 aaKnown RBP eCLIP27.62■■■□□ 2.01
SSPN-208ENST00000544231 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
SSPN-208ENST00000544231 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
SSPN-208ENST00000544231 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
SSPN-208ENST00000544231 BAZ1AQ9NRL2 1556 aaPredicted RBP26.83■■□□□ 1.89
SSPN-208ENST00000544231 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
SSPN-208ENST00000544231 CC2D2AQ9P2K1 1620 aa26.69■■□□□ 1.86
SSPN-208ENST00000544231 MROH2BQ7Z745 1585 aa26.65■■□□□ 1.86
SSPN-208ENST00000544231 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
SSPN-208ENST00000544231 SMARCA2P51531 1590 aa26.55■■□□□ 1.84
SSPN-208ENST00000544231 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
SSPN-208ENST00000544231 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
SSPN-208ENST00000544231 PEG3Q9GZU2 1588 aa26.5■■□□□ 1.83
SSPN-208ENST00000544231 NCAPD3P42695 1498 aa26.44■■□□□ 1.82
SSPN-208ENST00000544231 HMGXB3Q12766 1538 aa26.37■■□□□ 1.81
SSPN-208ENST00000544231 WIZO95785 1651 aa26.37■■□□□ 1.81
SSPN-208ENST00000544231 BAZ1BQ9UIG0 1483 aaKnown RBP26.35■■□□□ 1.81
SSPN-208ENST00000544231 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
SSPN-208ENST00000544231 TOP2AP11388 1531 aaKnown RBP26.18■■□□□ 1.78
SSPN-208ENST00000544231 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
SSPN-208ENST00000544231 CADPSQ9ULU8 1353 aa25.71■■□□□ 1.71
SSPN-208ENST00000544231 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
SSPN-208ENST00000544231 CFTRP13569 1480 aa25.64■■□□□ 1.69
SSPN-208ENST00000544231 NESP48681 1621 aa25.62■■□□□ 1.69
SSPN-208ENST00000544231 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
SSPN-208ENST00000544231 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
SSPN-208ENST00000544231 PRDM2Q13029 1718 aa25.45■■□□□ 1.66
SSPN-208ENST00000544231 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
SSPN-208ENST00000544231 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
SSPN-208ENST00000544231 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
SSPN-208ENST00000544231 MRC2Q9UBG0 1479 aa25.22■■□□□ 1.63
SSPN-208ENST00000544231 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
SSPN-208ENST00000544231 ABCC8Q09428 1581 aa25.13■■□□□ 1.61
SSPN-208ENST00000544231 WDR62O43379 1518 aa25.1■■□□□ 1.61
SSPN-208ENST00000544231 URB2Q14146 1524 aaKnown RBP25.09■■□□□ 1.61
SSPN-208ENST00000544231 DNMBPQ6XZF7 1577 aa25.06■■□□□ 1.6
SSPN-208ENST00000544231 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
SSPN-208ENST00000544231 TOPBP1Q92547 1522 aa25.04■■□□□ 1.6
SSPN-208ENST00000544231 CUX2O14529 1486 aa25.02■■□□□ 1.6
SSPN-208ENST00000544231 CUX1P39880 1505 aa24.99■■□□□ 1.59
SSPN-208ENST00000544231 TOP2BQ02880 1626 aa24.91■■□□□ 1.58
SSPN-208ENST00000544231 SYNJ1O43426 1573 aa24.89■■□□□ 1.58
SSPN-208ENST00000544231 BIVM-ERCC5R4GMW8 1640 aa24.89■■□□□ 1.57
SSPN-208ENST00000544231 FGD5Q6ZNL6 1462 aa24.86■■□□□ 1.57
SSPN-208ENST00000544231 POLA1P09884 1462 aaPredicted RBP24.85■■□□□ 1.57
SSPN-208ENST00000544231 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
SSPN-208ENST00000544231 SOGA1O94964 1423 aa24.78■■□□□ 1.56
SSPN-208ENST00000544231 TRIM41Q8WV44 630 aa24.77■■□□□ 1.56
SSPN-208ENST00000544231 RAD54L2Q9Y4B4 1467 aa24.71■■□□□ 1.55
SSPN-208ENST00000544231 TARBP1Q13395 1621 aaKnown RBP24.69■■□□□ 1.54
SSPN-208ENST00000544231 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
SSPN-208ENST00000544231 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
SSPN-208ENST00000544231 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
SSPN-208ENST00000544231 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
SSPN-208ENST00000544231 TDRD9Q8NDG6 1382 aaKnown RBP24.56■■□□□ 1.52
SSPN-208ENST00000544231 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
SSPN-208ENST00000544231 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.51
SSPN-208ENST00000544231 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
SSPN-208ENST00000544231 GAPVD1Q14C86 1478 aa24.5■■□□□ 1.51
SSPN-208ENST00000544231 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
SSPN-208ENST00000544231 GRIN2BQ13224 1484 aa24.45■■□□□ 1.51
SSPN-208ENST00000544231 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
SSPN-208ENST00000544231 PBRM1Q86U86 1689 aa24.37■■□□□ 1.49
SSPN-208ENST00000544231 EEA1Q15075 1411 aa24.35■■□□□ 1.49
SSPN-208ENST00000544231 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
SSPN-208ENST00000544231 SNAPC4Q5SXM2 1469 aa24.33■■□□□ 1.49
SSPN-208ENST00000544231 IGF1RP08069 1367 aa24.3■■□□□ 1.48
SSPN-208ENST00000544231 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
SSPN-208ENST00000544231 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
SSPN-208ENST00000544231 CUL7Q14999 1698 aa24.24■■□□□ 1.47
SSPN-208ENST00000544231 SYNJ2O15056 1496 aa24.24■■□□□ 1.47
SSPN-208ENST00000544231 ADAMTS12P58397 1594 aa24.24■■□□□ 1.47
SSPN-208ENST00000544231 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
SSPN-208ENST00000544231 CSRNP3Q8WYN3 585 aa24.21■■□□□ 1.47
SSPN-208ENST00000544231 CARMIL1Q5VZK9 1371 aa24.19■■□□□ 1.46
SSPN-208ENST00000544231 FBLN2P98095 1184 aa24.19■■□□□ 1.46
SSPN-208ENST00000544231 FAM9AQ8IZU1 332 aaPredicted RBP24.18■■□□□ 1.46
SSPN-208ENST00000544231 CHD1O14646 1710 aa24.12■■□□□ 1.45
SSPN-208ENST00000544231 GRIN2AQ12879 1464 aa24.12■■□□□ 1.45
SSPN-208ENST00000544231 PRXQ9BXM0 1461 aa24.1■■□□□ 1.45
SSPN-208ENST00000544231 RAPGEF2Q9Y4G8 1499 aa24.1■■□□□ 1.45
SSPN-208ENST00000544231 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
SSPN-208ENST00000544231 KIF21BO75037 1637 aa24■■□□□ 1.43
SSPN-208ENST00000544231 NUP160Q12769 1436 aa23.99■■□□□ 1.43
SSPN-208ENST00000544231 CEP170Q5SW79 1584 aa23.94■■□□□ 1.42
SSPN-208ENST00000544231 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
SSPN-208ENST00000544231 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.41
SSPN-208ENST00000544231 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms