RNA–Protein interactions for RNA: ENST00000543851.1

C1R-212, Transcript of complement C1r, humanhuman

TSL 4

Gene C1R, Length 476 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-212ENST00000543851 NISCHQ9Y2I1 1504 aa12.64□□□□□ -0.39
C1R-212ENST00000543851 ABCC9O60706 1549 aa12.07□□□□□ -0.48
C1R-212ENST00000543851 DNAJC5BQ9UF47 199 aa11.79□□□□□ -0.52
C1R-212ENST00000543851 CCDC180Q9P1Z9 1646 aa11.45□□□□□ -0.58
C1R-212ENST00000543851 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
C1R-212ENST00000543851 RB1CC1Q8TDY2 1594 aa11.17□□□□□ -0.62
C1R-212ENST00000543851 DNAJC5Q9H3Z4 198 aa11.07□□□□□ -0.64
C1R-212ENST00000543851 DCAF8L2P0C7V8 631 aa11.03□□□□□ -0.64
C1R-212ENST00000543851 NACADO15069 1562 aa10.97□□□□□ -0.65
C1R-212ENST00000543851 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
C1R-212ENST00000543851 BICRAQ9NZM4 1560 aa10.91□□□□□ -0.66
C1R-212ENST00000543851 CECR2Q9BXF3 1484 aa10.88□□□□□ -0.67
C1R-212ENST00000543851 CC2D2AQ9P2K1 1620 aa10.82□□□□□ -0.68
C1R-212ENST00000543851 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
C1R-212ENST00000543851 MYO15BQ96JP2 1530 aa10.6□□□□□ -0.71
C1R-212ENST00000543851 SHROOM4Q9ULL8 1493 aa10.58□□□□□ -0.72
C1R-212ENST00000543851 SCRIBQ14160 1630 aa10.55□□□□□ -0.72
C1R-212ENST00000543851 TRIM41Q8WV44 630 aa10.51□□□□□ -0.73
C1R-212ENST00000543851 CUX2O14529 1486 aa10.49□□□□□ -0.73
C1R-212ENST00000543851 ERCC6Q03468 1493 aa10.42□□□□□ -0.74
C1R-212ENST00000543851 ZCCHC6Q5VYS8 1495 aaKnown RBP10.36□□□□□ -0.75
C1R-212ENST00000543851 DCAF1Q9Y4B6 1507 aa10.33□□□□□ -0.76
C1R-212ENST00000543851 NESP48681 1621 aa10.25□□□□□ -0.77
C1R-212ENST00000543851 NCAPD3P42695 1498 aa10.16□□□□□ -0.78
C1R-212ENST00000543851 THOC2Q8NI27 1593 aaKnown RBP10.15□□□□□ -0.78
C1R-212ENST00000543851 SMARCA2P51531 1590 aa10.13□□□□□ -0.79
C1R-212ENST00000543851 ATAD2BQ9ULI0 1458 aa10.1□□□□□ -0.79
C1R-212ENST00000543851 KIF21AQ7Z4S6 1674 aa10.04□□□□□ -0.8
C1R-212ENST00000543851 HMGXB3Q12766 1538 aa10.02□□□□□ -0.81
C1R-212ENST00000543851 OSCARQ8IYS5 282 aa10□□□□□ -0.81
C1R-212ENST00000543851 BAZ1AQ9NRL2 1556 aaPredicted RBP9.98□□□□□ -0.81
C1R-212ENST00000543851 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
C1R-212ENST00000543851 LAMC3Q9Y6N6 1575 aa9.97□□□□□ -0.81
C1R-212ENST00000543851 PDS5BQ9NTI5 1447 aa9.97□□□□□ -0.81
C1R-212ENST00000543851 SMARCA4P51532 1647 aa9.96□□□□□ -0.82
C1R-212ENST00000543851 AEBP2Q6ZN18 517 aaPredicted RBP9.94□□□□□ -0.82
C1R-212ENST00000543851 MRC2Q9UBG0 1479 aa9.93□□□□□ -0.82
C1R-212ENST00000543851 RIMBP3CA6NJZ7 1639 aa9.91□□□□□ -0.82
C1R-212ENST00000543851 RIMBP3BA6NNM3 1639 aa9.91□□□□□ -0.82
C1R-212ENST00000543851 RIMBP3Q9UFD9 1639 aa9.91□□□□□ -0.82
C1R-212ENST00000543851 TRHP20396 242 aaPredicted RBP9.9□□□□□ -0.82
C1R-212ENST00000543851 WDR62O43379 1518 aa9.89□□□□□ -0.83
C1R-212ENST00000543851 CYB5RLQ6IPT4 315 aa9.86□□□□□ -0.83
C1R-212ENST00000543851 CADPSQ9ULU8 1353 aa9.86□□□□□ -0.83
C1R-212ENST00000543851 ARHGEF11O15085 1522 aa9.82□□□□□ -0.84
C1R-212ENST00000543851 CEP164Q9UPV0 1460 aa9.8□□□□□ -0.84
C1R-212ENST00000543851 PEG3Q9GZU2 1588 aa9.8□□□□□ -0.84
C1R-212ENST00000543851 MROH2BQ7Z745 1585 aa9.79□□□□□ -0.84
C1R-212ENST00000543851 FANCD2Q9BXW9 1451 aa9.77□□□□□ -0.85
C1R-212ENST00000543851 URB2Q14146 1524 aaKnown RBP9.73□□□□□ -0.85
C1R-212ENST00000543851 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
C1R-212ENST00000543851 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
C1R-212ENST00000543851 FBLN2P98095 1184 aa9.65□□□□□ -0.86
C1R-212ENST00000543851 WIZO95785 1651 aa9.64□□□□□ -0.87
C1R-212ENST00000543851 CFTRP13569 1480 aa9.63□□□□□ -0.87
C1R-212ENST00000543851 IFT140Q96RY7 1462 aa9.6□□□□□ -0.87
C1R-212ENST00000543851 CHD1O14646 1710 aa9.6□□□□□ -0.87
C1R-212ENST00000543851 ILDR1Q86SU0 546 aaPredicted RBP9.6□□□□□ -0.87
C1R-212ENST00000543851 AQRO60306 1485 aaKnown RBP eCLIP9.58□□□□□ -0.88
C1R-212ENST00000543851 EIF4G3O43432 1585 aaKnown RBP9.57□□□□□ -0.88
C1R-212ENST00000543851 RSF1Q96T23 1441 aaPredicted RBP9.56□□□□□ -0.88
C1R-212ENST00000543851 TOPBP1Q92547 1522 aa9.52□□□□□ -0.88
C1R-212ENST00000543851 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.9
C1R-212ENST00000543851 TDRD9Q8NDG6 1382 aaKnown RBP9.45□□□□□ -0.9
C1R-212ENST00000543851 TARBP1Q13395 1621 aaKnown RBP9.45□□□□□ -0.9
C1R-212ENST00000543851 CHMP7Q8WUX9 453 aaPredicted RBP9.44□□□□□ -0.9
C1R-212ENST00000543851 PRDM2Q13029 1718 aa9.44□□□□□ -0.9
C1R-212ENST00000543851 TOP2AP11388 1531 aaKnown RBP9.43□□□□□ -0.9
C1R-212ENST00000543851 SNAPC4Q5SXM2 1469 aa9.43□□□□□ -0.9
C1R-212ENST00000543851 RAD54L2Q9Y4B4 1467 aa9.43□□□□□ -0.9
C1R-212ENST00000543851 GAPVD1Q14C86 1478 aa9.42□□□□□ -0.9
C1R-212ENST00000543851 DNMBPQ6XZF7 1577 aa9.41□□□□□ -0.9
C1R-212ENST00000543851 KDM4FA0A1W2PPD8 638 aa9.41□□□□□ -0.9
C1R-212ENST00000543851 POLA1P09884 1462 aaPredicted RBP9.4□□□□□ -0.91
C1R-212ENST00000543851 SYNJ1O43426 1573 aa9.39□□□□□ -0.91
C1R-212ENST00000543851 CCDC88BA6NC98 1476 aa9.39□□□□□ -0.91
C1R-212ENST00000543851 ABCC8Q09428 1581 aa9.38□□□□□ -0.91
C1R-212ENST00000543851 SOGA1O94964 1423 aa9.36□□□□□ -0.91
C1R-212ENST00000543851 ERCC6L2Q5T890 1561 aa9.36□□□□□ -0.91
C1R-212ENST00000543851 SYNJ2O15056 1496 aa9.32□□□□□ -0.92
C1R-212ENST00000543851 MAGI1Q96QZ7 1491 aaPredicted RBP9.32□□□□□ -0.92
C1R-212ENST00000543851 KIF13AQ9H1H9 1805 aa9.31□□□□□ -0.92
C1R-212ENST00000543851 GRIN2BQ13224 1484 aa9.3□□□□□ -0.92
C1R-212ENST00000543851 FAM69CQ0P6D2 419 aa9.29□□□□□ -0.92
C1R-212ENST00000543851 FGD5Q6ZNL6 1462 aa9.28□□□□□ -0.92
C1R-212ENST00000543851 CEP170Q5SW79 1584 aa9.24□□□□□ -0.93
C1R-212ENST00000543851 WDR97A6NE52 1622 aa9.22□□□□□ -0.93
C1R-212ENST00000543851 PBRM1Q86U86 1689 aa9.22□□□□□ -0.93
C1R-212ENST00000543851 CUX1P39880 1505 aa9.21□□□□□ -0.93
C1R-212ENST00000543851 KDM6BO15054 1643 aa9.2□□□□□ -0.94
C1R-212ENST00000543851 TSPOAP1O95153 1857 aa9.2□□□□□ -0.94
C1R-212ENST00000543851 ABCC10Q5T3U5 1492 aa9.2□□□□□ -0.94
C1R-212ENST00000543851 GRIN2AQ12879 1464 aa9.19□□□□□ -0.94
C1R-212ENST00000543851 HECW2Q9P2P5 1572 aa9.19□□□□□ -0.94
C1R-212ENST00000543851 ADGRL1O94910 1474 aa9.17□□□□□ -0.94
C1R-212ENST00000543851 DIP2BQ9P265 1576 aa9.16□□□□□ -0.94
C1R-212ENST00000543851 NUP160Q12769 1436 aa9.16□□□□□ -0.94
C1R-212ENST00000543851 PRG4Q92954 1404 aaPredicted RBP9.16□□□□□ -0.94
C1R-212ENST00000543851 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
C1R-212ENST00000543851 FBXO41Q8TF61 875 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms