RNA–Protein interactions for RNA: ENST00000543822.1

C12orf60-204, Transcript of chromosome 12 open reading frame 60, humanhuman

TSL 3

Gene C12orf60, Length 746 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf60-204ENST00000543822 NISCHQ9Y2I1 1504 aa34.86■■■■□ 3.17
C12orf60-204ENST00000543822 ABCC9O60706 1549 aa32.09■■■□□ 2.73
C12orf60-204ENST00000543822 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
C12orf60-204ENST00000543822 DNAJC5BQ9UF47 199 aa30.65■■■□□ 2.5
C12orf60-204ENST00000543822 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
C12orf60-204ENST00000543822 NACADO15069 1562 aa30.03■■■□□ 2.4
C12orf60-204ENST00000543822 PABPN1Q86U42 306 aaKnown RBP eCLIP29.76■■■□□ 2.35
C12orf60-204ENST00000543822 UNC13AQ9UPW8 1703 aa29.64■■■□□ 2.34
C12orf60-204ENST00000543822 DCAF8L2P0C7V8 631 aa29.6■■■□□ 2.33
C12orf60-204ENST00000543822 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
C12orf60-204ENST00000543822 BICRAQ9NZM4 1560 aa29.46■■■□□ 2.31
C12orf60-204ENST00000543822 SHROOM4Q9ULL8 1493 aa29.12■■■□□ 2.25
C12orf60-204ENST00000543822 CECR2Q9BXF3 1484 aa29.02■■■□□ 2.24
C12orf60-204ENST00000543822 CC2D2AQ9P2K1 1620 aa29.01■■■□□ 2.23
C12orf60-204ENST00000543822 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
C12orf60-204ENST00000543822 EIF4G1Q04637 1599 aaKnown RBP28.8■■■□□ 2.2
C12orf60-204ENST00000543822 ZCCHC6Q5VYS8 1495 aaKnown RBP28.76■■■□□ 2.19
C12orf60-204ENST00000543822 DNAJC5Q9H3Z4 198 aa28.68■■■□□ 2.18
C12orf60-204ENST00000543822 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
C12orf60-204ENST00000543822 CUX2O14529 1486 aa28.02■■■□□ 2.08
C12orf60-204ENST00000543822 ERCC6Q03468 1493 aa27.79■■■□□ 2.04
C12orf60-204ENST00000543822 NCAPD3P42695 1498 aa27.72■■■□□ 2.03
C12orf60-204ENST00000543822 ATAD2BQ9ULI0 1458 aa27.51■■□□□ 1.99
C12orf60-204ENST00000543822 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
C12orf60-204ENST00000543822 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
C12orf60-204ENST00000543822 NESP48681 1621 aa27.38■■□□□ 1.97
C12orf60-204ENST00000543822 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
C12orf60-204ENST00000543822 THOC2Q8NI27 1593 aaKnown RBP27.28■■□□□ 1.96
C12orf60-204ENST00000543822 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.95
C12orf60-204ENST00000543822 LAMC3Q9Y6N6 1575 aa27.19■■□□□ 1.94
C12orf60-204ENST00000543822 BAZ1AQ9NRL2 1556 aaPredicted RBP27.13■■□□□ 1.93
C12orf60-204ENST00000543822 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
C12orf60-204ENST00000543822 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
C12orf60-204ENST00000543822 PDS5BQ9NTI5 1447 aa27.06■■□□□ 1.92
C12orf60-204ENST00000543822 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
C12orf60-204ENST00000543822 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
C12orf60-204ENST00000543822 MRC2Q9UBG0 1479 aa26.83■■□□□ 1.89
C12orf60-204ENST00000543822 MROH2BQ7Z745 1585 aa26.81■■□□□ 1.88
C12orf60-204ENST00000543822 WDR62O43379 1518 aa26.8■■□□□ 1.88
C12orf60-204ENST00000543822 OSCARQ8IYS5 282 aa26.61■■□□□ 1.85
C12orf60-204ENST00000543822 CEP164Q9UPV0 1460 aa26.59■■□□□ 1.85
C12orf60-204ENST00000543822 FANCD2Q9BXW9 1451 aa26.5■■□□□ 1.83
C12orf60-204ENST00000543822 WIZO95785 1651 aa26.45■■□□□ 1.82
C12orf60-204ENST00000543822 CFTRP13569 1480 aa26.4■■□□□ 1.82
C12orf60-204ENST00000543822 URB2Q14146 1524 aaKnown RBP26.3■■□□□ 1.8
C12orf60-204ENST00000543822 RIMBP3CA6NJZ7 1639 aa26.29■■□□□ 1.8
C12orf60-204ENST00000543822 RIMBP3BA6NNM3 1639 aa26.29■■□□□ 1.8
C12orf60-204ENST00000543822 RIMBP3Q9UFD9 1639 aa26.29■■□□□ 1.8
C12orf60-204ENST00000543822 ARHGEF11O15085 1522 aa26.16■■□□□ 1.78
C12orf60-204ENST00000543822 TOP2AP11388 1531 aaKnown RBP26.12■■□□□ 1.77
C12orf60-204ENST00000543822 IFT140Q96RY7 1462 aa26.11■■□□□ 1.77
C12orf60-204ENST00000543822 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
C12orf60-204ENST00000543822 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
C12orf60-204ENST00000543822 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
C12orf60-204ENST00000543822 CYB5RLQ6IPT4 315 aa25.98■■□□□ 1.75
C12orf60-204ENST00000543822 TOPBP1Q92547 1522 aa25.93■■□□□ 1.74
C12orf60-204ENST00000543822 EIF4G3O43432 1585 aaKnown RBP25.91■■□□□ 1.74
C12orf60-204ENST00000543822 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
C12orf60-204ENST00000543822 TRHP20396 242 aaPredicted RBP25.88■■□□□ 1.73
C12orf60-204ENST00000543822 ARAP1Q96P48 1450 aa25.84■■□□□ 1.73
C12orf60-204ENST00000543822 CHD1O14646 1710 aa25.83■■□□□ 1.73
C12orf60-204ENST00000543822 CCDC88BA6NC98 1476 aa25.81■■□□□ 1.72
C12orf60-204ENST00000543822 DNMBPQ6XZF7 1577 aa25.79■■□□□ 1.72
C12orf60-204ENST00000543822 AQRO60306 1485 aaKnown RBP eCLIP25.76■■□□□ 1.71
C12orf60-204ENST00000543822 TARBP1Q13395 1621 aaKnown RBP25.75■■□□□ 1.71
C12orf60-204ENST00000543822 FBLN2P98095 1184 aa25.69■■□□□ 1.7
C12orf60-204ENST00000543822 POLA1P09884 1462 aaPredicted RBP25.62■■□□□ 1.69
C12orf60-204ENST00000543822 AEBP2Q6ZN18 517 aaPredicted RBP25.61■■□□□ 1.69
C12orf60-204ENST00000543822 CLASP1Q7Z460 1538 aa25.55■■□□□ 1.68
C12orf60-204ENST00000543822 WDR97A6NE52 1622 aa25.53■■□□□ 1.68
C12orf60-204ENST00000543822 SOGA1O94964 1423 aa25.5■■□□□ 1.67
C12orf60-204ENST00000543822 TDRD9Q8NDG6 1382 aaKnown RBP25.5■■□□□ 1.67
C12orf60-204ENST00000543822 RAD54L2Q9Y4B4 1467 aa25.5■■□□□ 1.67
C12orf60-204ENST00000543822 SYNJ1O43426 1573 aa25.49■■□□□ 1.67
C12orf60-204ENST00000543822 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
C12orf60-204ENST00000543822 MAGI1Q96QZ7 1491 aaPredicted RBP25.46■■□□□ 1.67
C12orf60-204ENST00000543822 CHMP7Q8WUX9 453 aaPredicted RBP25.45■■□□□ 1.66
C12orf60-204ENST00000543822 GRIN2BQ13224 1484 aa25.37■■□□□ 1.65
C12orf60-204ENST00000543822 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
C12orf60-204ENST00000543822 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
C12orf60-204ENST00000543822 GAPVD1Q14C86 1478 aa25.31■■□□□ 1.64
C12orf60-204ENST00000543822 CUX1P39880 1505 aa25.23■■□□□ 1.63
C12orf60-204ENST00000543822 PBRM1Q86U86 1689 aa25.2■■□□□ 1.63
C12orf60-204ENST00000543822 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.61
C12orf60-204ENST00000543822 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.6
C12orf60-204ENST00000543822 ERCC6L2Q5T890 1561 aa25.04■■□□□ 1.6
C12orf60-204ENST00000543822 GRIN2AQ12879 1464 aa25.03■■□□□ 1.6
C12orf60-204ENST00000543822 CEP170Q5SW79 1584 aa25■■□□□ 1.59
C12orf60-204ENST00000543822 NUP160Q12769 1436 aa24.99■■□□□ 1.59
C12orf60-204ENST00000543822 SHROOM2Q13796 1616 aa24.95■■□□□ 1.58
C12orf60-204ENST00000543822 KIF13AQ9H1H9 1805 aa24.95■■□□□ 1.58
C12orf60-204ENST00000543822 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
C12orf60-204ENST00000543822 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
C12orf60-204ENST00000543822 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
C12orf60-204ENST00000543822 PRG4Q92954 1404 aaPredicted RBP24.77■■□□□ 1.56
C12orf60-204ENST00000543822 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
C12orf60-204ENST00000543822 ABCC10Q5T3U5 1492 aa24.76■■□□□ 1.55
C12orf60-204ENST00000543822 FAM69CQ0P6D2 419 aa24.73■■□□□ 1.55
C12orf60-204ENST00000543822 JPH4Q96JJ6 628 aa24.72■■□□□ 1.55
C12orf60-204ENST00000543822 MAPKBP1O60336 1514 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms