RNA–Protein interactions for RNA: ENST00000543776.1

SPTY2D1-203, Transcript of SPT2 chromatin protein domain containing 1, humanhuman

TSL 4

Gene SPTY2D1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTY2D1-203ENST00000543776 NISCHQ9Y2I1 1504 aa22.33■■□□□ 1.17
SPTY2D1-203ENST00000543776 CCDC180Q9P1Z9 1646 aa19.46■□□□□ 0.71
SPTY2D1-203ENST00000543776 DCAF8L2P0C7V8 631 aa18.91■□□□□ 0.62
SPTY2D1-203ENST00000543776 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
SPTY2D1-203ENST00000543776 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
SPTY2D1-203ENST00000543776 ABCC9O60706 1549 aa18.79■□□□□ 0.6
SPTY2D1-203ENST00000543776 ZCCHC6Q5VYS8 1495 aaKnown RBP18.63■□□□□ 0.57
SPTY2D1-203ENST00000543776 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
SPTY2D1-203ENST00000543776 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.54
SPTY2D1-203ENST00000543776 NACADO15069 1562 aa18.36■□□□□ 0.53
SPTY2D1-203ENST00000543776 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
SPTY2D1-203ENST00000543776 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
SPTY2D1-203ENST00000543776 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
SPTY2D1-203ENST00000543776 PABPN1Q86U42 306 aaKnown RBP eCLIP17.8■□□□□ 0.44
SPTY2D1-203ENST00000543776 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
SPTY2D1-203ENST00000543776 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
SPTY2D1-203ENST00000543776 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
SPTY2D1-203ENST00000543776 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
SPTY2D1-203ENST00000543776 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
SPTY2D1-203ENST00000543776 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.35
SPTY2D1-203ENST00000543776 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
SPTY2D1-203ENST00000543776 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
SPTY2D1-203ENST00000543776 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
SPTY2D1-203ENST00000543776 SMARCA2P51531 1590 aa17.05■□□□□ 0.32
SPTY2D1-203ENST00000543776 ATAD2BQ9ULI0 1458 aa17.04■□□□□ 0.32
SPTY2D1-203ENST00000543776 NCAPD3P42695 1498 aa17■□□□□ 0.31
SPTY2D1-203ENST00000543776 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.31
SPTY2D1-203ENST00000543776 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
SPTY2D1-203ENST00000543776 WIZO95785 1651 aa16.93■□□□□ 0.3
SPTY2D1-203ENST00000543776 CC2D2AQ9P2K1 1620 aa16.88■□□□□ 0.29
SPTY2D1-203ENST00000543776 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
SPTY2D1-203ENST00000543776 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
SPTY2D1-203ENST00000543776 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
SPTY2D1-203ENST00000543776 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
SPTY2D1-203ENST00000543776 PHF23Q9BUL5 403 aaPredicted RBP16.61■□□□□ 0.25
SPTY2D1-203ENST00000543776 CADPSQ9ULU8 1353 aa16.61■□□□□ 0.25
SPTY2D1-203ENST00000543776 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
SPTY2D1-203ENST00000543776 CFTRP13569 1480 aa16.5■□□□□ 0.23
SPTY2D1-203ENST00000543776 PDS5BQ9NTI5 1447 aa16.46■□□□□ 0.23
SPTY2D1-203ENST00000543776 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
SPTY2D1-203ENST00000543776 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.2
SPTY2D1-203ENST00000543776 FANCD2Q9BXW9 1451 aa16.33■□□□□ 0.2
SPTY2D1-203ENST00000543776 NESP48681 1621 aa16.31■□□□□ 0.2
SPTY2D1-203ENST00000543776 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
SPTY2D1-203ENST00000543776 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
SPTY2D1-203ENST00000543776 CEP164Q9UPV0 1460 aa16.26■□□□□ 0.19
SPTY2D1-203ENST00000543776 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
SPTY2D1-203ENST00000543776 MRC2Q9UBG0 1479 aa16.11■□□□□ 0.17
SPTY2D1-203ENST00000543776 SOGA1O94964 1423 aa16.09■□□□□ 0.17
SPTY2D1-203ENST00000543776 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.16
SPTY2D1-203ENST00000543776 CUX1P39880 1505 aa16.07■□□□□ 0.16
SPTY2D1-203ENST00000543776 PRDM2Q13029 1718 aa16.07■□□□□ 0.16
SPTY2D1-203ENST00000543776 TOP2BQ02880 1626 aa16.06■□□□□ 0.16
SPTY2D1-203ENST00000543776 TOPBP1Q92547 1522 aa16.06■□□□□ 0.16
SPTY2D1-203ENST00000543776 EEA1Q15075 1411 aa16.06■□□□□ 0.16
SPTY2D1-203ENST00000543776 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
SPTY2D1-203ENST00000543776 URB2Q14146 1524 aaKnown RBP16.03■□□□□ 0.16
SPTY2D1-203ENST00000543776 KIF27Q86VH2 1401 aa16.02■□□□□ 0.15
SPTY2D1-203ENST00000543776 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
SPTY2D1-203ENST00000543776 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
SPTY2D1-203ENST00000543776 BIVM-ERCC5R4GMW8 1640 aa15.96■□□□□ 0.15
SPTY2D1-203ENST00000543776 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.14
SPTY2D1-203ENST00000543776 KIF21AQ7Z4S6 1674 aa15.95■□□□□ 0.14
SPTY2D1-203ENST00000543776 CUX2O14529 1486 aa15.94■□□□□ 0.14
SPTY2D1-203ENST00000543776 IFT140Q96RY7 1462 aa15.93■□□□□ 0.14
SPTY2D1-203ENST00000543776 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
SPTY2D1-203ENST00000543776 WDR62O43379 1518 aa15.92■□□□□ 0.14
SPTY2D1-203ENST00000543776 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
SPTY2D1-203ENST00000543776 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
SPTY2D1-203ENST00000543776 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.13
SPTY2D1-203ENST00000543776 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
SPTY2D1-203ENST00000543776 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
SPTY2D1-203ENST00000543776 IGF1RP08069 1367 aa15.87■□□□□ 0.13
SPTY2D1-203ENST00000543776 SENP3Q9H4L4 574 aaPredicted RBP15.86■□□□□ 0.13
SPTY2D1-203ENST00000543776 CARMIL1Q5VZK9 1371 aa15.83■□□□□ 0.12
SPTY2D1-203ENST00000543776 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.12
SPTY2D1-203ENST00000543776 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
SPTY2D1-203ENST00000543776 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
SPTY2D1-203ENST00000543776 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
SPTY2D1-203ENST00000543776 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.12
SPTY2D1-203ENST00000543776 GRIN2BQ13224 1484 aa15.77■□□□□ 0.11
SPTY2D1-203ENST00000543776 FBLN2P98095 1184 aa15.76■□□□□ 0.11
SPTY2D1-203ENST00000543776 GOLGA3Q08378 1498 aa15.72■□□□□ 0.11
SPTY2D1-203ENST00000543776 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
SPTY2D1-203ENST00000543776 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.11
SPTY2D1-203ENST00000543776 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
SPTY2D1-203ENST00000543776 WDR97A6NE52 1622 aa15.71■□□□□ 0.11
SPTY2D1-203ENST00000543776 TNIKQ9UKE5 1360 aa15.7■□□□□ 0.1
SPTY2D1-203ENST00000543776 PRXQ9BXM0 1461 aa15.7■□□□□ 0.1
SPTY2D1-203ENST00000543776 FHAD1B1AJZ9 1412 aa15.69■□□□□ 0.1
SPTY2D1-203ENST00000543776 ZNF608Q9ULD9 1512 aaPredicted RBP15.69■□□□□ 0.1
SPTY2D1-203ENST00000543776 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
SPTY2D1-203ENST00000543776 MAGI1Q96QZ7 1491 aaPredicted RBP15.62■□□□□ 0.09
SPTY2D1-203ENST00000543776 KIF21BO75037 1637 aa15.6■□□□□ 0.09
SPTY2D1-203ENST00000543776 ABCA5Q8WWZ7 1642 aa15.6■□□□□ 0.09
SPTY2D1-203ENST00000543776 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
SPTY2D1-203ENST00000543776 CUL7Q14999 1698 aa15.58■□□□□ 0.08
SPTY2D1-203ENST00000543776 SYNJ2O15056 1496 aa15.57■□□□□ 0.08
SPTY2D1-203ENST00000543776 EIF4G3O43432 1585 aaKnown RBP15.54■□□□□ 0.08
SPTY2D1-203ENST00000543776 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms