RNA–Protein interactions for RNA: ENST00000543548.1

NTF3-205, Transcript of neurotrophin 3, humanhuman

TSL 3

Gene NTF3, Length 516 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3-205ENST00000543548 NISCHQ9Y2I1 1504 aa39.85■■■■□ 3.97
NTF3-205ENST00000543548 ABCC9O60706 1549 aa37.1■■■■□ 3.53
NTF3-205ENST00000543548 CCDC180Q9P1Z9 1646 aa36.07■■■■□ 3.36
NTF3-205ENST00000543548 DNAJC5BQ9UF47 199 aa35.82■■■■□ 3.32
NTF3-205ENST00000543548 RB1CC1Q8TDY2 1594 aa34.79■■■■□ 3.16
NTF3-205ENST00000543548 PABPN1Q86U42 306 aaKnown RBP eCLIP34.45■■■■□ 3.11
NTF3-205ENST00000543548 NACADO15069 1562 aa34.34■■■■□ 3.09
NTF3-205ENST00000543548 UNC13AQ9UPW8 1703 aa34.13■■■■□ 3.05
NTF3-205ENST00000543548 DCAF8L2P0C7V8 631 aa34.04■■■■□ 3.04
NTF3-205ENST00000543548 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
NTF3-205ENST00000543548 MYO15BQ96JP2 1530 aa33.54■■■□□ 2.96
NTF3-205ENST00000543548 CECR2Q9BXF3 1484 aa33.48■■■□□ 2.95
NTF3-205ENST00000543548 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
NTF3-205ENST00000543548 DNAJC5Q9H3Z4 198 aa33.43■■■□□ 2.94
NTF3-205ENST00000543548 SHROOM4Q9ULL8 1493 aa33.19■■■□□ 2.9
NTF3-205ENST00000543548 EIF4G1Q04637 1599 aaKnown RBP33.13■■■□□ 2.89
NTF3-205ENST00000543548 SCRIBQ14160 1630 aa32.88■■■□□ 2.85
NTF3-205ENST00000543548 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
NTF3-205ENST00000543548 DCAF1Q9Y4B6 1507 aa32.79■■■□□ 2.84
NTF3-205ENST00000543548 CUX2O14529 1486 aa32.26■■■□□ 2.75
NTF3-205ENST00000543548 ERCC6Q03468 1493 aa31.98■■■□□ 2.71
NTF3-205ENST00000543548 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
NTF3-205ENST00000543548 NESP48681 1621 aa31.67■■■□□ 2.66
NTF3-205ENST00000543548 ATAD2BQ9ULI0 1458 aa31.57■■■□□ 2.64
NTF3-205ENST00000543548 TRIM41Q8WV44 630 aa31.54■■■□□ 2.64
NTF3-205ENST00000543548 THOC2Q8NI27 1593 aaKnown RBP31.46■■■□□ 2.63
NTF3-205ENST00000543548 HMGXB3Q12766 1538 aa31.39■■■□□ 2.61
NTF3-205ENST00000543548 SMARCA2P51531 1590 aa31.32■■■□□ 2.6
NTF3-205ENST00000543548 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
NTF3-205ENST00000543548 KIF21AQ7Z4S6 1674 aa31.16■■■□□ 2.58
NTF3-205ENST00000543548 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
NTF3-205ENST00000543548 BAZ1BQ9UIG0 1483 aaKnown RBP31.13■■■□□ 2.57
NTF3-205ENST00000543548 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
NTF3-205ENST00000543548 PEG3Q9GZU2 1588 aa30.96■■■□□ 2.55
NTF3-205ENST00000543548 BAZ1AQ9NRL2 1556 aaPredicted RBP30.92■■■□□ 2.54
NTF3-205ENST00000543548 MRC2Q9UBG0 1479 aa30.81■■■□□ 2.52
NTF3-205ENST00000543548 WDR62O43379 1518 aa30.78■■■□□ 2.52
NTF3-205ENST00000543548 CADPSQ9ULU8 1353 aa30.76■■■□□ 2.51
NTF3-205ENST00000543548 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
NTF3-205ENST00000543548 OSCARQ8IYS5 282 aa30.67■■■□□ 2.5
NTF3-205ENST00000543548 CEP164Q9UPV0 1460 aa30.47■■■□□ 2.47
NTF3-205ENST00000543548 RIMBP3CA6NJZ7 1639 aa30.42■■■□□ 2.46
NTF3-205ENST00000543548 RIMBP3BA6NNM3 1639 aa30.42■■■□□ 2.46
NTF3-205ENST00000543548 RIMBP3Q9UFD9 1639 aa30.42■■■□□ 2.46
NTF3-205ENST00000543548 FANCD2Q9BXW9 1451 aa30.4■■■□□ 2.46
NTF3-205ENST00000543548 WIZO95785 1651 aa30.33■■■□□ 2.45
NTF3-205ENST00000543548 URB2Q14146 1524 aaKnown RBP30.27■■■□□ 2.44
NTF3-205ENST00000543548 CFTRP13569 1480 aa30.22■■■□□ 2.43
NTF3-205ENST00000543548 ARHGEF11O15085 1522 aa30.22■■■□□ 2.43
NTF3-205ENST00000543548 ZNF608Q9ULD9 1512 aaPredicted RBP30.08■■■□□ 2.41
NTF3-205ENST00000543548 CYB5RLQ6IPT4 315 aa30.08■■■□□ 2.41
NTF3-205ENST00000543548 TRHP20396 242 aaPredicted RBP29.97■■■□□ 2.39
NTF3-205ENST00000543548 IFT140Q96RY7 1462 aa29.9■■■□□ 2.38
NTF3-205ENST00000543548 ARAP1Q96P48 1450 aa29.89■■■□□ 2.38
NTF3-205ENST00000543548 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
NTF3-205ENST00000543548 EIF4G3O43432 1585 aaKnown RBP29.77■■■□□ 2.36
NTF3-205ENST00000543548 PRDM2Q13029 1718 aa29.76■■■□□ 2.36
NTF3-205ENST00000543548 CHD1O14646 1710 aa29.75■■■□□ 2.35
NTF3-205ENST00000543548 RSF1Q96T23 1441 aaPredicted RBP29.75■■■□□ 2.35
NTF3-205ENST00000543548 TOPBP1Q92547 1522 aa29.75■■■□□ 2.35
NTF3-205ENST00000543548 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
NTF3-205ENST00000543548 AQRO60306 1485 aaKnown RBP eCLIP29.67■■■□□ 2.34
NTF3-205ENST00000543548 FBLN2P98095 1184 aa29.59■■■□□ 2.33
NTF3-205ENST00000543548 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
NTF3-205ENST00000543548 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
NTF3-205ENST00000543548 DNMBPQ6XZF7 1577 aa29.5■■■□□ 2.31
NTF3-205ENST00000543548 ABCC8Q09428 1581 aa29.49■■■□□ 2.31
NTF3-205ENST00000543548 CLASP1Q7Z460 1538 aa29.4■■■□□ 2.3
NTF3-205ENST00000543548 POLA1P09884 1462 aaPredicted RBP29.38■■■□□ 2.29
NTF3-205ENST00000543548 RAD54L2Q9Y4B4 1467 aa29.35■■■□□ 2.29
NTF3-205ENST00000543548 TDRD9Q8NDG6 1382 aaKnown RBP29.34■■■□□ 2.29
NTF3-205ENST00000543548 SNAPC4Q5SXM2 1469 aa29.28■■■□□ 2.28
NTF3-205ENST00000543548 SOGA1O94964 1423 aa29.21■■■□□ 2.27
NTF3-205ENST00000543548 SYNJ1O43426 1573 aa29.19■■■□□ 2.26
NTF3-205ENST00000543548 CHMP7Q8WUX9 453 aaPredicted RBP29.19■■■□□ 2.26
NTF3-205ENST00000543548 GAPVD1Q14C86 1478 aa29.13■■■□□ 2.25
NTF3-205ENST00000543548 MAGI1Q96QZ7 1491 aaPredicted RBP29.1■■■□□ 2.25
NTF3-205ENST00000543548 SYNJ2O15056 1496 aa29.05■■■□□ 2.24
NTF3-205ENST00000543548 FGD5Q6ZNL6 1462 aa29.05■■■□□ 2.24
NTF3-205ENST00000543548 WDR97A6NE52 1622 aa29.05■■■□□ 2.24
NTF3-205ENST00000543548 GRIN2BQ13224 1484 aa29.03■■■□□ 2.24
NTF3-205ENST00000543548 ERCC6L2Q5T890 1561 aa28.97■■■□□ 2.23
NTF3-205ENST00000543548 CUX1P39880 1505 aa28.93■■■□□ 2.22
NTF3-205ENST00000543548 PBRM1Q86U86 1689 aa28.86■■■□□ 2.21
NTF3-205ENST00000543548 KIF13AQ9H1H9 1805 aa28.8■■■□□ 2.2
NTF3-205ENST00000543548 CEP170Q5SW79 1584 aa28.73■■■□□ 2.19
NTF3-205ENST00000543548 ABCA5Q8WWZ7 1642 aa28.71■■■□□ 2.19
NTF3-205ENST00000543548 ILDR1Q86SU0 546 aaPredicted RBP28.7■■■□□ 2.18
NTF3-205ENST00000543548 GRIN2AQ12879 1464 aa28.68■■■□□ 2.18
NTF3-205ENST00000543548 ABCA10Q8WWZ4 1543 aa28.65■■■□□ 2.18
NTF3-205ENST00000543548 NUP160Q12769 1436 aa28.65■■■□□ 2.18
NTF3-205ENST00000543548 KDM4FA0A1W2PPD8 638 aa28.63■■■□□ 2.17
NTF3-205ENST00000543548 SHROOM2Q13796 1616 aa28.62■■■□□ 2.17
NTF3-205ENST00000543548 ADAMTS12P58397 1594 aa28.54■■■□□ 2.16
NTF3-205ENST00000543548 FAM69CQ0P6D2 419 aa28.51■■■□□ 2.15
NTF3-205ENST00000543548 ABCC10Q5T3U5 1492 aa28.48■■■□□ 2.15
NTF3-205ENST00000543548 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
NTF3-205ENST00000543548 FHAD1B1AJZ9 1412 aa28.4■■■□□ 2.14
NTF3-205ENST00000543548 DIP2BQ9P265 1576 aa28.38■■■□□ 2.13
NTF3-205ENST00000543548 JPH4Q96JJ6 628 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 349.6 ms