RNA–Protein interactions for RNA: ENST00000543460.1

C16orf62-217, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 2

Gene C16orf62, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-217ENST00000543460 NISCHQ9Y2I1 1504 aa23.42■■□□□ 1.34
C16orf62-217ENST00000543460 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
C16orf62-217ENST00000543460 ABCC9O60706 1549 aa19.9■□□□□ 0.78
C16orf62-217ENST00000543460 MYO15BQ96JP2 1530 aa19.61■□□□□ 0.73
C16orf62-217ENST00000543460 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
C16orf62-217ENST00000543460 ZCCHC6Q5VYS8 1495 aaKnown RBP19.55■□□□□ 0.72
C16orf62-217ENST00000543460 NACADO15069 1562 aa19.53■□□□□ 0.72
C16orf62-217ENST00000543460 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
C16orf62-217ENST00000543460 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
C16orf62-217ENST00000543460 UNC13AQ9UPW8 1703 aa18.91■□□□□ 0.62
C16orf62-217ENST00000543460 SHROOM4Q9ULL8 1493 aa18.86■□□□□ 0.61
C16orf62-217ENST00000543460 BICRAQ9NZM4 1560 aa18.77■□□□□ 0.6
C16orf62-217ENST00000543460 SCRIBQ14160 1630 aa18.77■□□□□ 0.6
C16orf62-217ENST00000543460 PABPN1Q86U42 306 aaKnown RBP eCLIP18.56■□□□□ 0.56
C16orf62-217ENST00000543460 EIF4G1Q04637 1599 aaKnown RBP18.27■□□□□ 0.52
C16orf62-217ENST00000543460 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
C16orf62-217ENST00000543460 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
C16orf62-217ENST00000543460 CC2D2AQ9P2K1 1620 aa18.1■□□□□ 0.49
C16orf62-217ENST00000543460 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
C16orf62-217ENST00000543460 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
C16orf62-217ENST00000543460 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
C16orf62-217ENST00000543460 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
C16orf62-217ENST00000543460 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
C16orf62-217ENST00000543460 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.46
C16orf62-217ENST00000543460 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
C16orf62-217ENST00000543460 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
C16orf62-217ENST00000543460 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
C16orf62-217ENST00000543460 BAZ1BQ9UIG0 1483 aaKnown RBP17.8■□□□□ 0.44
C16orf62-217ENST00000543460 WIZO95785 1651 aa17.74■□□□□ 0.43
C16orf62-217ENST00000543460 TOP2AP11388 1531 aaKnown RBP17.68■□□□□ 0.42
C16orf62-217ENST00000543460 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
C16orf62-217ENST00000543460 CADPSQ9ULU8 1353 aa17.43■□□□□ 0.38
C16orf62-217ENST00000543460 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
C16orf62-217ENST00000543460 CFTRP13569 1480 aa17.39■□□□□ 0.37
C16orf62-217ENST00000543460 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
C16orf62-217ENST00000543460 PDS5BQ9NTI5 1447 aa17.34■□□□□ 0.37
C16orf62-217ENST00000543460 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
C16orf62-217ENST00000543460 NESP48681 1621 aa17.27■□□□□ 0.36
C16orf62-217ENST00000543460 ERCC6Q03468 1493 aa17.2■□□□□ 0.34
C16orf62-217ENST00000543460 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
C16orf62-217ENST00000543460 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
C16orf62-217ENST00000543460 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
C16orf62-217ENST00000543460 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
C16orf62-217ENST00000543460 CUX2O14529 1486 aa17.1■□□□□ 0.33
C16orf62-217ENST00000543460 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
C16orf62-217ENST00000543460 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
C16orf62-217ENST00000543460 WDR62O43379 1518 aa17.06■□□□□ 0.32
C16orf62-217ENST00000543460 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
C16orf62-217ENST00000543460 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.31
C16orf62-217ENST00000543460 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
C16orf62-217ENST00000543460 WRNQ14191 1432 aaPredicted RBP eCLIP16.86■□□□□ 0.29
C16orf62-217ENST00000543460 CUX1P39880 1505 aa16.85■□□□□ 0.29
C16orf62-217ENST00000543460 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
C16orf62-217ENST00000543460 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
C16orf62-217ENST00000543460 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
C16orf62-217ENST00000543460 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
C16orf62-217ENST00000543460 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
C16orf62-217ENST00000543460 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
C16orf62-217ENST00000543460 FGD5Q6ZNL6 1462 aa16.75■□□□□ 0.27
C16orf62-217ENST00000543460 SYNJ1O43426 1573 aa16.73■□□□□ 0.27
C16orf62-217ENST00000543460 SOGA1O94964 1423 aa16.73■□□□□ 0.27
C16orf62-217ENST00000543460 ABCA10Q8WWZ4 1543 aa16.7■□□□□ 0.26
C16orf62-217ENST00000543460 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
C16orf62-217ENST00000543460 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
C16orf62-217ENST00000543460 ZNF608Q9ULD9 1512 aaPredicted RBP16.59■□□□□ 0.25
C16orf62-217ENST00000543460 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
C16orf62-217ENST00000543460 GRIN2BQ13224 1484 aa16.55■□□□□ 0.24
C16orf62-217ENST00000543460 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
C16orf62-217ENST00000543460 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
C16orf62-217ENST00000543460 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
C16orf62-217ENST00000543460 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
C16orf62-217ENST00000543460 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
C16orf62-217ENST00000543460 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.24
C16orf62-217ENST00000543460 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
C16orf62-217ENST00000543460 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
C16orf62-217ENST00000543460 CHIC1Q5VXU3 224 aa16.46■□□□□ 0.23
C16orf62-217ENST00000543460 EEA1Q15075 1411 aa16.45■□□□□ 0.22
C16orf62-217ENST00000543460 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
C16orf62-217ENST00000543460 CUL7Q14999 1698 aa16.41■□□□□ 0.22
C16orf62-217ENST00000543460 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
C16orf62-217ENST00000543460 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
C16orf62-217ENST00000543460 IGF1RP08069 1367 aa16.4■□□□□ 0.22
C16orf62-217ENST00000543460 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
C16orf62-217ENST00000543460 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
C16orf62-217ENST00000543460 CHD1O14646 1710 aa16.32■□□□□ 0.2
C16orf62-217ENST00000543460 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
C16orf62-217ENST00000543460 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
C16orf62-217ENST00000543460 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
C16orf62-217ENST00000543460 NUP160Q12769 1436 aa16.28■□□□□ 0.2
C16orf62-217ENST00000543460 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
C16orf62-217ENST00000543460 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
C16orf62-217ENST00000543460 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
C16orf62-217ENST00000543460 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
C16orf62-217ENST00000543460 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
C16orf62-217ENST00000543460 CLASP1Q7Z460 1538 aa16.23■□□□□ 0.19
C16orf62-217ENST00000543460 FBLN2P98095 1184 aa16.22■□□□□ 0.19
C16orf62-217ENST00000543460 KIAA0586Q9BVV6 1533 aa16.19■□□□□ 0.18
C16orf62-217ENST00000543460 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
C16orf62-217ENST00000543460 KIF21BO75037 1637 aa16.17■□□□□ 0.18
C16orf62-217ENST00000543460 SHROOM2Q13796 1616 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms