RNA–Protein interactions for RNA: ENST00000543364.1

RAB35-205, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 3

Gene RAB35, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-205ENST00000543364 NISCHQ9Y2I1 1504 aa37.15■■■■□ 3.54
RAB35-205ENST00000543364 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.86
RAB35-205ENST00000543364 ABCC9O60706 1549 aa32.47■■■□□ 2.79
RAB35-205ENST00000543364 DCAF8L2P0C7V8 631 aa31.24■■■□□ 2.59
RAB35-205ENST00000543364 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
RAB35-205ENST00000543364 NACADO15069 1562 aa31.03■■■□□ 2.56
RAB35-205ENST00000543364 ZCCHC6Q5VYS8 1495 aaKnown RBP30.9■■■□□ 2.54
RAB35-205ENST00000543364 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
RAB35-205ENST00000543364 DCAF1Q9Y4B6 1507 aa30.65■■■□□ 2.5
RAB35-205ENST00000543364 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.46
RAB35-205ENST00000543364 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
RAB35-205ENST00000543364 BICRAQ9NZM4 1560 aa30.21■■■□□ 2.43
RAB35-205ENST00000543364 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
RAB35-205ENST00000543364 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
RAB35-205ENST00000543364 SHROOM4Q9ULL8 1493 aa29.73■■■□□ 2.35
RAB35-205ENST00000543364 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.3
RAB35-205ENST00000543364 CC2D2AQ9P2K1 1620 aa29.31■■■□□ 2.28
RAB35-205ENST00000543364 CECR2Q9BXF3 1484 aa29.14■■■□□ 2.26
RAB35-205ENST00000543364 SMARCA4P51532 1647 aa28.82■■■□□ 2.2
RAB35-205ENST00000543364 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
RAB35-205ENST00000543364 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
RAB35-205ENST00000543364 MROH2BQ7Z745 1585 aa28.68■■■□□ 2.18
RAB35-205ENST00000543364 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
RAB35-205ENST00000543364 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
RAB35-205ENST00000543364 PEG3Q9GZU2 1588 aa28.49■■■□□ 2.15
RAB35-205ENST00000543364 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
RAB35-205ENST00000543364 BAZ1BQ9UIG0 1483 aaKnown RBP28.45■■■□□ 2.14
RAB35-205ENST00000543364 WIZO95785 1651 aa28.36■■■□□ 2.13
RAB35-205ENST00000543364 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
RAB35-205ENST00000543364 NESP48681 1621 aa28.1■■■□□ 2.09
RAB35-205ENST00000543364 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
RAB35-205ENST00000543364 ERCC6Q03468 1493 aa27.94■■■□□ 2.06
RAB35-205ENST00000543364 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.05
RAB35-205ENST00000543364 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
RAB35-205ENST00000543364 CCDC88BA6NC98 1476 aa27.75■■■□□ 2.03
RAB35-205ENST00000543364 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
RAB35-205ENST00000543364 SUPT5HO00267 1087 aaKnown RBP27.69■■■□□ 2.02
RAB35-205ENST00000543364 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
RAB35-205ENST00000543364 CFTRP13569 1480 aa27.67■■■□□ 2.02
RAB35-205ENST00000543364 CUX2O14529 1486 aa27.6■■■□□ 2.01
RAB35-205ENST00000543364 THOC2Q8NI27 1593 aaKnown RBP27.57■■■□□ 2
RAB35-205ENST00000543364 FANCD2Q9BXW9 1451 aa27.55■■■□□ 2
RAB35-205ENST00000543364 CEP164Q9UPV0 1460 aa27.49■■□□□ 1.99
RAB35-205ENST00000543364 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
RAB35-205ENST00000543364 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
RAB35-205ENST00000543364 WDR62O43379 1518 aa27.35■■□□□ 1.97
RAB35-205ENST00000543364 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
RAB35-205ENST00000543364 TOPBP1Q92547 1522 aa27.1■■□□□ 1.93
RAB35-205ENST00000543364 ABCC8Q09428 1581 aa27.02■■□□□ 1.92
RAB35-205ENST00000543364 DNMBPQ6XZF7 1577 aa27.02■■□□□ 1.92
RAB35-205ENST00000543364 DNAJC5Q9H3Z4 198 aa26.93■■□□□ 1.9
RAB35-205ENST00000543364 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
RAB35-205ENST00000543364 CUX1P39880 1505 aa26.89■■□□□ 1.89
RAB35-205ENST00000543364 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
RAB35-205ENST00000543364 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
RAB35-205ENST00000543364 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
RAB35-205ENST00000543364 FGD5Q6ZNL6 1462 aa26.8■■□□□ 1.88
RAB35-205ENST00000543364 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
RAB35-205ENST00000543364 SOGA1O94964 1423 aa26.79■■□□□ 1.88
RAB35-205ENST00000543364 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.87
RAB35-205ENST00000543364 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
RAB35-205ENST00000543364 EIF4G3O43432 1585 aaKnown RBP26.68■■□□□ 1.86
RAB35-205ENST00000543364 WRNQ14191 1432 aaPredicted RBP eCLIP26.68■■□□□ 1.86
RAB35-205ENST00000543364 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
RAB35-205ENST00000543364 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
RAB35-205ENST00000543364 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
RAB35-205ENST00000543364 OSCARQ8IYS5 282 aa26.55■■□□□ 1.84
RAB35-205ENST00000543364 WDR97A6NE52 1622 aa26.51■■□□□ 1.83
RAB35-205ENST00000543364 ABCA10Q8WWZ4 1543 aa26.5■■□□□ 1.83
RAB35-205ENST00000543364 FBLN2P98095 1184 aa26.47■■□□□ 1.83
RAB35-205ENST00000543364 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
RAB35-205ENST00000543364 GRIN2BQ13224 1484 aa26.43■■□□□ 1.82
RAB35-205ENST00000543364 SNAPC4Q5SXM2 1469 aa26.43■■□□□ 1.82
RAB35-205ENST00000543364 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.81
RAB35-205ENST00000543364 CHD1O14646 1710 aa26.37■■□□□ 1.81
RAB35-205ENST00000543364 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
RAB35-205ENST00000543364 CHMP7Q8WUX9 453 aaPredicted RBP26.34■■□□□ 1.81
RAB35-205ENST00000543364 MAGI1Q96QZ7 1491 aaPredicted RBP26.33■■□□□ 1.81
RAB35-205ENST00000543364 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
RAB35-205ENST00000543364 ERICH3Q5RHP9 1530 aa26.16■■□□□ 1.78
RAB35-205ENST00000543364 ADAMTS12P58397 1594 aa26.14■■□□□ 1.78
RAB35-205ENST00000543364 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
RAB35-205ENST00000543364 KIF27Q86VH2 1401 aa26.12■■□□□ 1.77
RAB35-205ENST00000543364 TRIM41Q8WV44 630 aa26.1■■□□□ 1.77
RAB35-205ENST00000543364 RIMBP3CA6NJZ7 1639 aa26.09■■□□□ 1.77
RAB35-205ENST00000543364 RIMBP3BA6NNM3 1639 aa26.09■■□□□ 1.77
RAB35-205ENST00000543364 RIMBP3Q9UFD9 1639 aa26.09■■□□□ 1.77
RAB35-205ENST00000543364 GRIN2AQ12879 1464 aa26.09■■□□□ 1.77
RAB35-205ENST00000543364 IGF1RP08069 1367 aa26.08■■□□□ 1.77
RAB35-205ENST00000543364 ARHGEF11O15085 1522 aa26.07■■□□□ 1.76
RAB35-205ENST00000543364 CLASP1Q7Z460 1538 aa26.07■■□□□ 1.76
RAB35-205ENST00000543364 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
RAB35-205ENST00000543364 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
RAB35-205ENST00000543364 NUP160Q12769 1436 aa25.97■■□□□ 1.75
RAB35-205ENST00000543364 CYB5RLQ6IPT4 315 aa25.94■■□□□ 1.74
RAB35-205ENST00000543364 CARMIL1Q5VZK9 1371 aa25.91■■□□□ 1.74
RAB35-205ENST00000543364 CUL7Q14999 1698 aa25.89■■□□□ 1.73
RAB35-205ENST00000543364 ARAP1Q96P48 1450 aa25.88■■□□□ 1.73
RAB35-205ENST00000543364 JPH4Q96JJ6 628 aa25.8■■□□□ 1.72
RAB35-205ENST00000543364 ERCC6L2Q5T890 1561 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms