RNA–Protein interactions for RNA: ENST00000543128.5

CCDC189-205, Transcript of coiled-coil domain containing 189, humanhuman

TSL 1 (best)

Gene CCDC189, Length 1,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-205ENST00000543128 NISCHQ9Y2I1 1504 aa47.38■■■■■ 5.18
CCDC189-205ENST00000543128 CCDC180Q9P1Z9 1646 aa41.18■■■■■ 4.18
CCDC189-205ENST00000543128 ZCCHC6Q5VYS8 1495 aaKnown RBP39.95■■■■□ 3.99
CCDC189-205ENST00000543128 SHROOM4Q9ULL8 1493 aa39.27■■■■□ 3.88
CCDC189-205ENST00000543128 ABCC9O60706 1549 aa39.24■■■■□ 3.87
CCDC189-205ENST00000543128 DCAF1Q9Y4B6 1507 aa39.14■■■■□ 3.86
CCDC189-205ENST00000543128 DCAF8L2P0C7V8 631 aa38.92■■■■□ 3.82
CCDC189-205ENST00000543128 MYO15BQ96JP2 1530 aa38.62■■■■□ 3.77
CCDC189-205ENST00000543128 NACADO15069 1562 aa38.46■■■■□ 3.75
CCDC189-205ENST00000543128 RB1CC1Q8TDY2 1594 aa38.2■■■■□ 3.71
CCDC189-205ENST00000543128 SUPT5HO00267 1087 aaKnown RBP38.17■■■■□ 3.7
CCDC189-205ENST00000543128 SCRIBQ14160 1630 aa37.79■■■■□ 3.64
CCDC189-205ENST00000543128 UNC13AQ9UPW8 1703 aa37.34■■■■□ 3.57
CCDC189-205ENST00000543128 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
CCDC189-205ENST00000543128 BICRAQ9NZM4 1560 aa37.04■■■■□ 3.52
CCDC189-205ENST00000543128 CHIC1Q5VXU3 224 aa36.96■■■■□ 3.51
CCDC189-205ENST00000543128 PABPN1Q86U42 306 aaKnown RBP eCLIP36.94■■■■□ 3.5
CCDC189-205ENST00000543128 CECR2Q9BXF3 1484 aa36.8■■■■□ 3.48
CCDC189-205ENST00000543128 MROH2BQ7Z745 1585 aa36.67■■■■□ 3.46
CCDC189-205ENST00000543128 BAZ1AQ9NRL2 1556 aaPredicted RBP36.5■■■■□ 3.43
CCDC189-205ENST00000543128 WIZO95785 1651 aa36.43■■■■□ 3.42
CCDC189-205ENST00000543128 SMARCA4P51532 1647 aa36.26■■■■□ 3.4
CCDC189-205ENST00000543128 TOP2AP11388 1531 aaKnown RBP36.01■■■■□ 3.36
CCDC189-205ENST00000543128 EIF4G1Q04637 1599 aaKnown RBP35.96■■■■□ 3.35
CCDC189-205ENST00000543128 PEG3Q9GZU2 1588 aa35.82■■■■□ 3.33
CCDC189-205ENST00000543128 TRIM41Q8WV44 630 aa35.8■■■■□ 3.32
CCDC189-205ENST00000543128 ATAD2BQ9ULI0 1458 aa35.73■■■■□ 3.31
CCDC189-205ENST00000543128 SMARCA2P51531 1590 aa35.73■■■■□ 3.31
CCDC189-205ENST00000543128 CCDC88BA6NC98 1476 aa35.7■■■■□ 3.3
CCDC189-205ENST00000543128 LOC105371045A0A1W2PR82 267 aa35.62■■■■□ 3.29
CCDC189-205ENST00000543128 NCAPD3P42695 1498 aa35.52■■■■□ 3.28
CCDC189-205ENST00000543128 CC2D2AQ9P2K1 1620 aa35.5■■■■□ 3.27
CCDC189-205ENST00000543128 BAZ1BQ9UIG0 1483 aaKnown RBP35.5■■■■□ 3.27
CCDC189-205ENST00000543128 HMGXB3Q12766 1538 aa35.41■■■■□ 3.26
CCDC189-205ENST00000543128 ABCC8Q09428 1581 aa35.22■■■■□ 3.23
CCDC189-205ENST00000543128 FAM9AQ8IZU1 332 aaPredicted RBP35.21■■■■□ 3.23
CCDC189-205ENST00000543128 DNAJC5BQ9UF47 199 aa34.95■■■■□ 3.18
CCDC189-205ENST00000543128 WRNQ14191 1432 aaPredicted RBP eCLIP34.86■■■■□ 3.17
CCDC189-205ENST00000543128 PCGF6Q9BYE7 350 aa34.8■■■■□ 3.16
CCDC189-205ENST00000543128 EEA1Q15075 1411 aa34.76■■■■□ 3.15
CCDC189-205ENST00000543128 SOGA1O94964 1423 aa34.72■■■■□ 3.15
CCDC189-205ENST00000543128 SYNJ1O43426 1573 aa34.71■■■■□ 3.15
CCDC189-205ENST00000543128 EHMT2Q96KQ7 1210 aa34.71■■■■□ 3.15
CCDC189-205ENST00000543128 CFTRP13569 1480 aa34.62■■■■□ 3.13
CCDC189-205ENST00000543128 TRIM26Q12899 539 aaPredicted RBP34.58■■■■□ 3.13
CCDC189-205ENST00000543128 CADPSQ9ULU8 1353 aa34.57■■■■□ 3.12
CCDC189-205ENST00000543128 RUSC2Q8N2Y8 1516 aa34.57■■■■□ 3.12
CCDC189-205ENST00000543128 CSRNP3Q8WYN3 585 aa34.53■■■■□ 3.12
CCDC189-205ENST00000543128 TOP2BQ02880 1626 aa34.49■■■■□ 3.11
CCDC189-205ENST00000543128 HRCP23327 699 aa34.45■■■■□ 3.11
CCDC189-205ENST00000543128 BIVM-ERCC5R4GMW8 1640 aa34.44■■■■□ 3.1
CCDC189-205ENST00000543128 TNIKQ9UKE5 1360 aa34.39■■■■□ 3.1
CCDC189-205ENST00000543128 PRDM2Q13029 1718 aa34.34■■■■□ 3.09
CCDC189-205ENST00000543128 LAMC3Q9Y6N6 1575 aa34.34■■■■□ 3.09
CCDC189-205ENST00000543128 GOLGA3Q08378 1498 aa34.33■■■■□ 3.09
CCDC189-205ENST00000543128 NESP48681 1621 aa34.33■■■■□ 3.09
CCDC189-205ENST00000543128 KIF21BO75037 1637 aa34.29■■■■□ 3.08
CCDC189-205ENST00000543128 CEP162Q5TB80 1403 aa34.27■■■■□ 3.08
CCDC189-205ENST00000543128 CEP164Q9UPV0 1460 aa34.25■■■■□ 3.07
CCDC189-205ENST00000543128 CUX1P39880 1505 aa34.22■■■■□ 3.07
CCDC189-205ENST00000543128 FANCD2Q9BXW9 1451 aa34.17■■■■□ 3.06
CCDC189-205ENST00000543128 UBTFP17480 764 aaKnown RBP34.16■■■■□ 3.06
CCDC189-205ENST00000543128 PDS5BQ9NTI5 1447 aa34.1■■■■□ 3.05
CCDC189-205ENST00000543128 RAPGEF2Q9Y4G8 1499 aa33.97■■■■□ 3.03
CCDC189-205ENST00000543128 ERICH3Q5RHP9 1530 aa33.9■■■■□ 3.02
CCDC189-205ENST00000543128 KIF27Q86VH2 1401 aa33.9■■■■□ 3.02
CCDC189-205ENST00000543128 KIF21AQ7Z4S6 1674 aa33.89■■■■□ 3.02
CCDC189-205ENST00000543128 PRXQ9BXM0 1461 aa33.89■■■■□ 3.02
CCDC189-205ENST00000543128 PPARGC1BQ86YN6 1023 aaKnown RBP33.88■■■■□ 3.01
CCDC189-205ENST00000543128 CLIP1P30622 1438 aa33.82■■■■□ 3
CCDC189-205ENST00000543128 DNMBPQ6XZF7 1577 aa33.79■■■■□ 3
CCDC189-205ENST00000543128 URB2Q14146 1524 aaKnown RBP33.76■■■□□ 2.99
CCDC189-205ENST00000543128 TOPBP1Q92547 1522 aa33.76■■■□□ 2.99
CCDC189-205ENST00000543128 FGD5Q6ZNL6 1462 aa33.72■■■□□ 2.99
CCDC189-205ENST00000543128 ERCC6Q03468 1493 aa33.69■■■□□ 2.98
CCDC189-205ENST00000543128 MRC2Q9UBG0 1479 aa33.67■■■□□ 2.98
CCDC189-205ENST00000543128 CUX2O14529 1486 aa33.65■■■□□ 2.98
CCDC189-205ENST00000543128 VPS8Q8N3P4 1428 aa33.64■■■□□ 2.98
CCDC189-205ENST00000543128 ZEB1P37275 1124 aaPredicted RBP33.58■■■□□ 2.97
CCDC189-205ENST00000543128 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
CCDC189-205ENST00000543128 IGF1RP08069 1367 aa33.55■■■□□ 2.96
CCDC189-205ENST00000543128 WDR62O43379 1518 aa33.51■■■□□ 2.95
CCDC189-205ENST00000543128 THOC2Q8NI27 1593 aaKnown RBP33.46■■■□□ 2.95
CCDC189-205ENST00000543128 RAD54L2Q9Y4B4 1467 aa33.43■■■□□ 2.94
CCDC189-205ENST00000543128 ABCA10Q8WWZ4 1543 aa33.43■■■□□ 2.94
CCDC189-205ENST00000543128 TTBK1Q5TCY1 1321 aaPredicted RBP33.43■■■□□ 2.94
CCDC189-205ENST00000543128 ARAP1Q96P48 1450 aa33.41■■■□□ 2.94
CCDC189-205ENST00000543128 RANGAP1P46060 587 aaPredicted RBP33.39■■■□□ 2.94
CCDC189-205ENST00000543128 CARMIL1Q5VZK9 1371 aa33.38■■■□□ 2.93
CCDC189-205ENST00000543128 APLP2Q06481 763 aa33.3■■■□□ 2.92
CCDC189-205ENST00000543128 TARBP1Q13395 1621 aaKnown RBP33.27■■■□□ 2.92
CCDC189-205ENST00000543128 ARHGAP35Q9NRY4 1499 aa33.26■■■□□ 2.91
CCDC189-205ENST00000543128 WDR97A6NE52 1622 aa33.26■■■□□ 2.91
CCDC189-205ENST00000543128 IFT140Q96RY7 1462 aa33.21■■■□□ 2.91
CCDC189-205ENST00000543128 CUL7Q14999 1698 aa33.18■■■□□ 2.9
CCDC189-205ENST00000543128 TDRD9Q8NDG6 1382 aaKnown RBP33.15■■■□□ 2.9
CCDC189-205ENST00000543128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.13■■■□□ 2.89
CCDC189-205ENST00000543128 ABCA5Q8WWZ7 1642 aa33.11■■■□□ 2.89
CCDC189-205ENST00000543128 GAPVD1Q14C86 1478 aa33.08■■■□□ 2.89
CCDC189-205ENST00000543128 CCER1Q8TC90 406 aaPredicted RBP33.07■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms