RNA–Protein interactions for RNA: ENST00000543000.1

PLEKHG6-208, Transcript of pleckstrin homology and RhoGEF domain containing G6, humanhuman

TSL 3

Gene PLEKHG6, Length 289 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHG6-208ENST00000543000 NISCHQ9Y2I1 1504 aa34.78■■■■□ 3.16
PLEKHG6-208ENST00000543000 CCDC180Q9P1Z9 1646 aa30.81■■■□□ 2.52
PLEKHG6-208ENST00000543000 ABCC9O60706 1549 aa30.05■■■□□ 2.4
PLEKHG6-208ENST00000543000 ZCCHC6Q5VYS8 1495 aaKnown RBP29.02■■■□□ 2.24
PLEKHG6-208ENST00000543000 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
PLEKHG6-208ENST00000543000 NACADO15069 1562 aa28.96■■■□□ 2.23
PLEKHG6-208ENST00000543000 RB1CC1Q8TDY2 1594 aa28.94■■■□□ 2.22
PLEKHG6-208ENST00000543000 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
PLEKHG6-208ENST00000543000 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
PLEKHG6-208ENST00000543000 UNC13AQ9UPW8 1703 aa28.25■■■□□ 2.11
PLEKHG6-208ENST00000543000 SCRIBQ14160 1630 aa28.14■■■□□ 2.1
PLEKHG6-208ENST00000543000 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
PLEKHG6-208ENST00000543000 BICRAQ9NZM4 1560 aa28.1■■■□□ 2.09
PLEKHG6-208ENST00000543000 SHROOM4Q9ULL8 1493 aa27.8■■■□□ 2.04
PLEKHG6-208ENST00000543000 DNAJC5BQ9UF47 199 aa27.48■■□□□ 1.99
PLEKHG6-208ENST00000543000 EIF4G1Q04637 1599 aaKnown RBP27.33■■□□□ 1.97
PLEKHG6-208ENST00000543000 CC2D2AQ9P2K1 1620 aa27.16■■□□□ 1.94
PLEKHG6-208ENST00000543000 CECR2Q9BXF3 1484 aa27.1■■□□□ 1.93
PLEKHG6-208ENST00000543000 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
PLEKHG6-208ENST00000543000 BAZ1AQ9NRL2 1556 aaPredicted RBP26.93■■□□□ 1.9
PLEKHG6-208ENST00000543000 MROH2BQ7Z745 1585 aa26.82■■□□□ 1.88
PLEKHG6-208ENST00000543000 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
PLEKHG6-208ENST00000543000 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
PLEKHG6-208ENST00000543000 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
PLEKHG6-208ENST00000543000 PEG3Q9GZU2 1588 aa26.69■■□□□ 1.86
PLEKHG6-208ENST00000543000 HMGXB3Q12766 1538 aa26.61■■□□□ 1.85
PLEKHG6-208ENST00000543000 RSF1Q96T23 1441 aaPredicted RBP26.57■■□□□ 1.84
PLEKHG6-208ENST00000543000 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
PLEKHG6-208ENST00000543000 WIZO95785 1651 aa26.5■■□□□ 1.83
PLEKHG6-208ENST00000543000 TOP2AP11388 1531 aaKnown RBP26.25■■□□□ 1.79
PLEKHG6-208ENST00000543000 NESP48681 1621 aa26.06■■□□□ 1.76
PLEKHG6-208ENST00000543000 SUPT5HO00267 1087 aaKnown RBP25.98■■□□□ 1.75
PLEKHG6-208ENST00000543000 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
PLEKHG6-208ENST00000543000 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
PLEKHG6-208ENST00000543000 CCDC88BA6NC98 1476 aa25.95■■□□□ 1.74
PLEKHG6-208ENST00000543000 ERCC6Q03468 1493 aa25.86■■□□□ 1.73
PLEKHG6-208ENST00000543000 CFTRP13569 1480 aa25.85■■□□□ 1.73
PLEKHG6-208ENST00000543000 PDS5BQ9NTI5 1447 aa25.81■■□□□ 1.72
PLEKHG6-208ENST00000543000 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
PLEKHG6-208ENST00000543000 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
PLEKHG6-208ENST00000543000 THOC2Q8NI27 1593 aaKnown RBP25.61■■□□□ 1.69
PLEKHG6-208ENST00000543000 CEP164Q9UPV0 1460 aa25.61■■□□□ 1.69
PLEKHG6-208ENST00000543000 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
PLEKHG6-208ENST00000543000 CUX2O14529 1486 aa25.55■■□□□ 1.68
PLEKHG6-208ENST00000543000 MRC2Q9UBG0 1479 aa25.54■■□□□ 1.68
PLEKHG6-208ENST00000543000 WDR62O43379 1518 aa25.46■■□□□ 1.67
PLEKHG6-208ENST00000543000 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
PLEKHG6-208ENST00000543000 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
PLEKHG6-208ENST00000543000 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
PLEKHG6-208ENST00000543000 DNMBPQ6XZF7 1577 aa25.24■■□□□ 1.63
PLEKHG6-208ENST00000543000 CUX1P39880 1505 aa25.15■■□□□ 1.62
PLEKHG6-208ENST00000543000 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
PLEKHG6-208ENST00000543000 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
PLEKHG6-208ENST00000543000 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
PLEKHG6-208ENST00000543000 FGD5Q6ZNL6 1462 aa25.03■■□□□ 1.6
PLEKHG6-208ENST00000543000 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
PLEKHG6-208ENST00000543000 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
PLEKHG6-208ENST00000543000 ZNF608Q9ULD9 1512 aaPredicted RBP24.96■■□□□ 1.59
PLEKHG6-208ENST00000543000 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
PLEKHG6-208ENST00000543000 SOGA1O94964 1423 aa24.96■■□□□ 1.59
PLEKHG6-208ENST00000543000 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
PLEKHG6-208ENST00000543000 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
PLEKHG6-208ENST00000543000 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
PLEKHG6-208ENST00000543000 AQRO60306 1485 aaKnown RBP eCLIP24.83■■□□□ 1.57
PLEKHG6-208ENST00000543000 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
PLEKHG6-208ENST00000543000 ABCA10Q8WWZ4 1543 aa24.8■■□□□ 1.56
PLEKHG6-208ENST00000543000 WDR97A6NE52 1622 aa24.79■■□□□ 1.56
PLEKHG6-208ENST00000543000 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
PLEKHG6-208ENST00000543000 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
PLEKHG6-208ENST00000543000 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
PLEKHG6-208ENST00000543000 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
PLEKHG6-208ENST00000543000 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
PLEKHG6-208ENST00000543000 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.52
PLEKHG6-208ENST00000543000 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
PLEKHG6-208ENST00000543000 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
PLEKHG6-208ENST00000543000 OSCARQ8IYS5 282 aa24.51■■□□□ 1.51
PLEKHG6-208ENST00000543000 KIF27Q86VH2 1401 aa24.49■■□□□ 1.51
PLEKHG6-208ENST00000543000 ERICH3Q5RHP9 1530 aa24.49■■□□□ 1.51
PLEKHG6-208ENST00000543000 SYNJ2O15056 1496 aa24.48■■□□□ 1.51
PLEKHG6-208ENST00000543000 FBLN2P98095 1184 aa24.48■■□□□ 1.51
PLEKHG6-208ENST00000543000 CHD1O14646 1710 aa24.47■■□□□ 1.51
PLEKHG6-208ENST00000543000 CHMP7Q8WUX9 453 aaPredicted RBP24.44■■□□□ 1.5
PLEKHG6-208ENST00000543000 ADAMTS12P58397 1594 aa24.43■■□□□ 1.5
PLEKHG6-208ENST00000543000 IGF1RP08069 1367 aa24.41■■□□□ 1.5
PLEKHG6-208ENST00000543000 FHAD1B1AJZ9 1412 aa24.4■■□□□ 1.5
PLEKHG6-208ENST00000543000 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
PLEKHG6-208ENST00000543000 GRIN2AQ12879 1464 aa24.34■■□□□ 1.49
PLEKHG6-208ENST00000543000 RUSC2Q8N2Y8 1516 aa24.34■■□□□ 1.49
PLEKHG6-208ENST00000543000 CUL7Q14999 1698 aa24.27■■□□□ 1.48
PLEKHG6-208ENST00000543000 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
PLEKHG6-208ENST00000543000 NUP160Q12769 1436 aa24.25■■□□□ 1.47
PLEKHG6-208ENST00000543000 CARMIL1Q5VZK9 1371 aa24.24■■□□□ 1.47
PLEKHG6-208ENST00000543000 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
PLEKHG6-208ENST00000543000 ARHGEF11O15085 1522 aa24.13■■□□□ 1.45
PLEKHG6-208ENST00000543000 EEA1Q15075 1411 aa24.11■■□□□ 1.45
PLEKHG6-208ENST00000543000 RAPGEF2Q9Y4G8 1499 aa24.1■■□□□ 1.45
PLEKHG6-208ENST00000543000 RIMBP3CA6NJZ7 1639 aa24.1■■□□□ 1.45
PLEKHG6-208ENST00000543000 RIMBP3BA6NNM3 1639 aa24.1■■□□□ 1.45
PLEKHG6-208ENST00000543000 RIMBP3Q9UFD9 1639 aa24.1■■□□□ 1.45
PLEKHG6-208ENST00000543000 PRXQ9BXM0 1461 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms