RNA–Protein interactions for RNA: ENST00000542978.1

C1S-219, Transcript of complement C1s, humanhuman

TSL 5

Gene C1S, Length 661 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-219ENST00000542978 NISCHQ9Y2I1 1504 aa17.61■□□□□ 0.41
C1S-219ENST00000542978 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
C1S-219ENST00000542978 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
C1S-219ENST00000542978 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.09
C1S-219ENST00000542978 ABCC9O60706 1549 aa15.31■□□□□ 0.04
C1S-219ENST00000542978 SENP3Q9H4L4 574 aaPredicted RBP14.95□□□□□ -0.02
C1S-219ENST00000542978 DCAF8L2P0C7V8 631 aa14.91□□□□□ -0.02
C1S-219ENST00000542978 RB1CC1Q8TDY2 1594 aa14.72□□□□□ -0.05
C1S-219ENST00000542978 NACADO15069 1562 aa14.69□□□□□ -0.06
C1S-219ENST00000542978 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
C1S-219ENST00000542978 ZCCHC6Q5VYS8 1495 aaKnown RBP14.65□□□□□ -0.06
C1S-219ENST00000542978 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
C1S-219ENST00000542978 DCAF1Q9Y4B6 1507 aa14.54□□□□□ -0.08
C1S-219ENST00000542978 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
C1S-219ENST00000542978 SCRIBQ14160 1630 aa14.29□□□□□ -0.12
C1S-219ENST00000542978 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
C1S-219ENST00000542978 BICRAQ9NZM4 1560 aa14.17□□□□□ -0.14
C1S-219ENST00000542978 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
C1S-219ENST00000542978 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
C1S-219ENST00000542978 FOXD1Q16676 465 aa13.93□□□□□ -0.18
C1S-219ENST00000542978 EIF4G1Q04637 1599 aaKnown RBP13.86□□□□□ -0.19
C1S-219ENST00000542978 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
C1S-219ENST00000542978 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
C1S-219ENST00000542978 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
C1S-219ENST00000542978 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
C1S-219ENST00000542978 SMARCA2P51531 1590 aa13.58□□□□□ -0.23
C1S-219ENST00000542978 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
C1S-219ENST00000542978 MROH2BQ7Z745 1585 aa13.57□□□□□ -0.24
C1S-219ENST00000542978 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
C1S-219ENST00000542978 BAZ1BQ9UIG0 1483 aaKnown RBP13.51□□□□□ -0.25
C1S-219ENST00000542978 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
C1S-219ENST00000542978 PEG3Q9GZU2 1588 aa13.46□□□□□ -0.25
C1S-219ENST00000542978 RSF1Q96T23 1441 aaPredicted RBP13.45□□□□□ -0.26
C1S-219ENST00000542978 POTEDQ86YR6 584 aa13.44□□□□□ -0.26
C1S-219ENST00000542978 WIZO95785 1651 aa13.41□□□□□ -0.26
C1S-219ENST00000542978 SUPT5HO00267 1087 aaKnown RBP13.3□□□□□ -0.28
C1S-219ENST00000542978 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
C1S-219ENST00000542978 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
C1S-219ENST00000542978 NESP48681 1621 aa13.22□□□□□ -0.29
C1S-219ENST00000542978 MSH5O43196 834 aa13.22□□□□□ -0.29
C1S-219ENST00000542978 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
C1S-219ENST00000542978 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
C1S-219ENST00000542978 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
C1S-219ENST00000542978 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
C1S-219ENST00000542978 CFTRP13569 1480 aa13.1□□□□□ -0.31
C1S-219ENST00000542978 FANCD2Q9BXW9 1451 aa13.05□□□□□ -0.32
C1S-219ENST00000542978 CEP164Q9UPV0 1460 aa13.04□□□□□ -0.32
C1S-219ENST00000542978 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.33
C1S-219ENST00000542978 CUX2O14529 1486 aa13.01□□□□□ -0.33
C1S-219ENST00000542978 MRC2Q9UBG0 1479 aa12.99□□□□□ -0.33
C1S-219ENST00000542978 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
C1S-219ENST00000542978 THOC2Q8NI27 1593 aaKnown RBP12.95□□□□□ -0.34
C1S-219ENST00000542978 PRDM2Q13029 1718 aa12.92□□□□□ -0.34
C1S-219ENST00000542978 WDR62O43379 1518 aa12.9□□□□□ -0.34
C1S-219ENST00000542978 URB2Q14146 1524 aaKnown RBP12.87□□□□□ -0.35
C1S-219ENST00000542978 ABCC8Q09428 1581 aa12.86□□□□□ -0.35
C1S-219ENST00000542978 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.36
C1S-219ENST00000542978 TOPBP1Q92547 1522 aa12.82□□□□□ -0.36
C1S-219ENST00000542978 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
C1S-219ENST00000542978 IFT140Q96RY7 1462 aa12.76□□□□□ -0.37
C1S-219ENST00000542978 PPP6R1Q9UPN7 881 aa12.74□□□□□ -0.37
C1S-219ENST00000542978 CUX1P39880 1505 aa12.72□□□□□ -0.37
C1S-219ENST00000542978 SOGA1O94964 1423 aa12.72□□□□□ -0.37
C1S-219ENST00000542978 WRNQ14191 1432 aaPredicted RBP eCLIP12.72□□□□□ -0.37
C1S-219ENST00000542978 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
C1S-219ENST00000542978 FGD5Q6ZNL6 1462 aa12.71□□□□□ -0.38
C1S-219ENST00000542978 ADRA2BP18089 450 aa12.69□□□□□ -0.38
C1S-219ENST00000542978 RAD54L2Q9Y4B4 1467 aa12.68□□□□□ -0.38
C1S-219ENST00000542978 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
C1S-219ENST00000542978 TDRD9Q8NDG6 1382 aaKnown RBP12.65□□□□□ -0.38
C1S-219ENST00000542978 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.39
C1S-219ENST00000542978 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
C1S-219ENST00000542978 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
C1S-219ENST00000542978 SYNJ1O43426 1573 aa12.62□□□□□ -0.39
C1S-219ENST00000542978 FBLN2P98095 1184 aa12.61□□□□□ -0.39
C1S-219ENST00000542978 BIVM-ERCC5R4GMW8 1640 aa12.6□□□□□ -0.39
C1S-219ENST00000542978 EIF4G3O43432 1585 aaKnown RBP12.6□□□□□ -0.39
C1S-219ENST00000542978 DNAJC5Q9H3Z4 198 aa12.58□□□□□ -0.4
C1S-219ENST00000542978 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
C1S-219ENST00000542978 ABCA10Q8WWZ4 1543 aa12.57□□□□□ -0.4
C1S-219ENST00000542978 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
C1S-219ENST00000542978 WDR97A6NE52 1622 aa12.55□□□□□ -0.4
C1S-219ENST00000542978 GAPVD1Q14C86 1478 aa12.55□□□□□ -0.4
C1S-219ENST00000542978 GRIN2BQ13224 1484 aa12.54□□□□□ -0.4
C1S-219ENST00000542978 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
C1S-219ENST00000542978 SNAPC4Q5SXM2 1469 aa12.51□□□□□ -0.41
C1S-219ENST00000542978 MAGI1Q96QZ7 1491 aaPredicted RBP12.49□□□□□ -0.41
C1S-219ENST00000542978 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
C1S-219ENST00000542978 KIF27Q86VH2 1401 aa12.47□□□□□ -0.41
C1S-219ENST00000542978 SYNJ2O15056 1496 aa12.45□□□□□ -0.42
C1S-219ENST00000542978 PBRM1Q86U86 1689 aa12.45□□□□□ -0.42
C1S-219ENST00000542978 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
C1S-219ENST00000542978 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
C1S-219ENST00000542978 CHD1O14646 1710 aa12.4□□□□□ -0.43
C1S-219ENST00000542978 IGF1RP08069 1367 aa12.38□□□□□ -0.43
C1S-219ENST00000542978 ADAMTS12P58397 1594 aa12.37□□□□□ -0.43
C1S-219ENST00000542978 GRIN2AQ12879 1464 aa12.36□□□□□ -0.43
C1S-219ENST00000542978 CARMIL1Q5VZK9 1371 aa12.34□□□□□ -0.43
C1S-219ENST00000542978 CUL7Q14999 1698 aa12.32□□□□□ -0.44
C1S-219ENST00000542978 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms