RNA–Protein interactions for RNA: ENST00000542947.1

SLC6A13-210, Transcript of solute carrier family 6 member 13, humanhuman

TSL 3

Gene SLC6A13, Length 490 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13-210ENST00000542947 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
SLC6A13-210ENST00000542947 CCDC180Q9P1Z9 1646 aa38.86■■■■□ 3.81
SLC6A13-210ENST00000542947 ABCC9O60706 1549 aa37.42■■■■□ 3.58
SLC6A13-210ENST00000542947 ZCCHC6Q5VYS8 1495 aaKnown RBP36.69■■■■□ 3.46
SLC6A13-210ENST00000542947 DCAF8L2P0C7V8 631 aa36.39■■■■□ 3.42
SLC6A13-210ENST00000542947 NACADO15069 1562 aa36.39■■■■□ 3.42
SLC6A13-210ENST00000542947 DCAF1Q9Y4B6 1507 aa36.39■■■■□ 3.42
SLC6A13-210ENST00000542947 MYO15BQ96JP2 1530 aa36.36■■■■□ 3.41
SLC6A13-210ENST00000542947 RB1CC1Q8TDY2 1594 aa36.3■■■■□ 3.4
SLC6A13-210ENST00000542947 UNC13AQ9UPW8 1703 aa35.46■■■■□ 3.27
SLC6A13-210ENST00000542947 SCRIBQ14160 1630 aa35.43■■■■□ 3.26
SLC6A13-210ENST00000542947 BICRAQ9NZM4 1560 aa35.13■■■■□ 3.21
SLC6A13-210ENST00000542947 PABPN1Q86U42 306 aaKnown RBP eCLIP35.01■■■■□ 3.2
SLC6A13-210ENST00000542947 SHROOM4Q9ULL8 1493 aa34.91■■■■□ 3.18
SLC6A13-210ENST00000542947 EIF4G1Q04637 1599 aaKnown RBP34.19■■■■□ 3.06
SLC6A13-210ENST00000542947 CECR2Q9BXF3 1484 aa34.07■■■■□ 3.05
SLC6A13-210ENST00000542947 BAZ1AQ9NRL2 1556 aaPredicted RBP34.02■■■■□ 3.04
SLC6A13-210ENST00000542947 SMARCA4P51532 1647 aa33.97■■■■□ 3.03
SLC6A13-210ENST00000542947 CC2D2AQ9P2K1 1620 aa33.9■■■■□ 3.02
SLC6A13-210ENST00000542947 MROH2BQ7Z745 1585 aa33.81■■■■□ 3
SLC6A13-210ENST00000542947 DNAJC5BQ9UF47 199 aa33.77■■■■□ 3
SLC6A13-210ENST00000542947 SMARCA2P51531 1590 aa33.65■■■□□ 2.98
SLC6A13-210ENST00000542947 PEG3Q9GZU2 1588 aa33.64■■■□□ 2.98
SLC6A13-210ENST00000542947 ATAD2BQ9ULI0 1458 aa33.62■■■□□ 2.97
SLC6A13-210ENST00000542947 RSF1Q96T23 1441 aaPredicted RBP33.62■■■□□ 2.97
SLC6A13-210ENST00000542947 NCAPD3P42695 1498 aa33.53■■■□□ 2.96
SLC6A13-210ENST00000542947 WIZO95785 1651 aa33.48■■■□□ 2.95
SLC6A13-210ENST00000542947 HMGXB3Q12766 1538 aa33.45■■■□□ 2.95
SLC6A13-210ENST00000542947 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
SLC6A13-210ENST00000542947 TOP2AP11388 1531 aaKnown RBP33.2■■■□□ 2.91
SLC6A13-210ENST00000542947 SUPT5HO00267 1087 aaKnown RBP33.12■■■□□ 2.89
SLC6A13-210ENST00000542947 CCDC88BA6NC98 1476 aa32.76■■■□□ 2.84
SLC6A13-210ENST00000542947 LAMC3Q9Y6N6 1575 aa32.61■■■□□ 2.81
SLC6A13-210ENST00000542947 CADPSQ9ULU8 1353 aa32.58■■■□□ 2.81
SLC6A13-210ENST00000542947 NESP48681 1621 aa32.51■■■□□ 2.8
SLC6A13-210ENST00000542947 CFTRP13569 1480 aa32.5■■■□□ 2.79
SLC6A13-210ENST00000542947 PRDM2Q13029 1718 aa32.38■■■□□ 2.77
SLC6A13-210ENST00000542947 PDS5BQ9NTI5 1447 aa32.35■■■□□ 2.77
SLC6A13-210ENST00000542947 ERCC6Q03468 1493 aa32.26■■■□□ 2.75
SLC6A13-210ENST00000542947 KIF21AQ7Z4S6 1674 aa32.21■■■□□ 2.75
SLC6A13-210ENST00000542947 FANCD2Q9BXW9 1451 aa32.21■■■□□ 2.75
SLC6A13-210ENST00000542947 CEP164Q9UPV0 1460 aa32.15■■■□□ 2.74
SLC6A13-210ENST00000542947 MRC2Q9UBG0 1479 aa31.98■■■□□ 2.71
SLC6A13-210ENST00000542947 THOC2Q8NI27 1593 aaKnown RBP31.98■■■□□ 2.71
SLC6A13-210ENST00000542947 WDR62O43379 1518 aa31.86■■■□□ 2.69
SLC6A13-210ENST00000542947 ABCC8Q09428 1581 aa31.84■■■□□ 2.69
SLC6A13-210ENST00000542947 URB2Q14146 1524 aaKnown RBP31.84■■■□□ 2.69
SLC6A13-210ENST00000542947 DNMBPQ6XZF7 1577 aa31.79■■■□□ 2.68
SLC6A13-210ENST00000542947 TOPBP1Q92547 1522 aa31.75■■■□□ 2.67
SLC6A13-210ENST00000542947 CUX2O14529 1486 aa31.75■■■□□ 2.67
SLC6A13-210ENST00000542947 WRNQ14191 1432 aaPredicted RBP eCLIP31.71■■■□□ 2.67
SLC6A13-210ENST00000542947 CUX1P39880 1505 aa31.7■■■□□ 2.66
SLC6A13-210ENST00000542947 BIVM-ERCC5R4GMW8 1640 aa31.61■■■□□ 2.65
SLC6A13-210ENST00000542947 TOP2BQ02880 1626 aa31.6■■■□□ 2.65
SLC6A13-210ENST00000542947 SYNJ1O43426 1573 aa31.59■■■□□ 2.65
SLC6A13-210ENST00000542947 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
SLC6A13-210ENST00000542947 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
SLC6A13-210ENST00000542947 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
SLC6A13-210ENST00000542947 SOGA1O94964 1423 aa31.39■■■□□ 2.62
SLC6A13-210ENST00000542947 TARBP1Q13395 1621 aaKnown RBP31.38■■■□□ 2.61
SLC6A13-210ENST00000542947 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
SLC6A13-210ENST00000542947 TRIM41Q8WV44 630 aa31.3■■■□□ 2.6
SLC6A13-210ENST00000542947 WDR97A6NE52 1622 aa31.27■■■□□ 2.6
SLC6A13-210ENST00000542947 ABCA10Q8WWZ4 1543 aa31.25■■■□□ 2.59
SLC6A13-210ENST00000542947 CHIC1Q5VXU3 224 aa31.22■■■□□ 2.59
SLC6A13-210ENST00000542947 ZNF608Q9ULD9 1512 aaPredicted RBP31.2■■■□□ 2.59
SLC6A13-210ENST00000542947 EIF4G3O43432 1585 aaKnown RBP31.16■■■□□ 2.58
SLC6A13-210ENST00000542947 TDRD9Q8NDG6 1382 aaKnown RBP31.12■■■□□ 2.57
SLC6A13-210ENST00000542947 ABCA5Q8WWZ7 1642 aa31.09■■■□□ 2.57
SLC6A13-210ENST00000542947 AQRO60306 1485 aaKnown RBP eCLIP31.09■■■□□ 2.57
SLC6A13-210ENST00000542947 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
SLC6A13-210ENST00000542947 KIF27Q86VH2 1401 aa31.03■■■□□ 2.56
SLC6A13-210ENST00000542947 GRIN2BQ13224 1484 aa30.99■■■□□ 2.55
SLC6A13-210ENST00000542947 PBRM1Q86U86 1689 aa30.99■■■□□ 2.55
SLC6A13-210ENST00000542947 ERICH3Q5RHP9 1530 aa30.91■■■□□ 2.54
SLC6A13-210ENST00000542947 MAGI1Q96QZ7 1491 aaPredicted RBP30.87■■■□□ 2.53
SLC6A13-210ENST00000542947 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
SLC6A13-210ENST00000542947 EEA1Q15075 1411 aa30.81■■■□□ 2.52
SLC6A13-210ENST00000542947 RUSC2Q8N2Y8 1516 aa30.81■■■□□ 2.52
SLC6A13-210ENST00000542947 IGF1RP08069 1367 aa30.77■■■□□ 2.52
SLC6A13-210ENST00000542947 ADAMTS12P58397 1594 aa30.76■■■□□ 2.52
SLC6A13-210ENST00000542947 CUL7Q14999 1698 aa30.76■■■□□ 2.51
SLC6A13-210ENST00000542947 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
SLC6A13-210ENST00000542947 FHAD1B1AJZ9 1412 aa30.73■■■□□ 2.51
SLC6A13-210ENST00000542947 CHD1O14646 1710 aa30.67■■■□□ 2.5
SLC6A13-210ENST00000542947 CHMP7Q8WUX9 453 aaPredicted RBP30.64■■■□□ 2.5
SLC6A13-210ENST00000542947 CARMIL1Q5VZK9 1371 aa30.63■■■□□ 2.49
SLC6A13-210ENST00000542947 FBLN2P98095 1184 aa30.61■■■□□ 2.49
SLC6A13-210ENST00000542947 CSRNP3Q8WYN3 585 aa30.61■■■□□ 2.49
SLC6A13-210ENST00000542947 GRIN2AQ12879 1464 aa30.59■■■□□ 2.49
SLC6A13-210ENST00000542947 FAM9AQ8IZU1 332 aaPredicted RBP30.58■■■□□ 2.49
SLC6A13-210ENST00000542947 PRXQ9BXM0 1461 aa30.53■■■□□ 2.48
SLC6A13-210ENST00000542947 RAPGEF2Q9Y4G8 1499 aa30.53■■■□□ 2.48
SLC6A13-210ENST00000542947 OSCARQ8IYS5 282 aa30.48■■■□□ 2.47
SLC6A13-210ENST00000542947 KIF21BO75037 1637 aa30.44■■■□□ 2.46
SLC6A13-210ENST00000542947 NUP160Q12769 1436 aa30.42■■■□□ 2.46
SLC6A13-210ENST00000542947 CEP170Q5SW79 1584 aa30.4■■■□□ 2.46
SLC6A13-210ENST00000542947 CLASP1Q7Z460 1538 aa30.33■■■□□ 2.45
SLC6A13-210ENST00000542947 GOLGA3Q08378 1498 aa30.29■■■□□ 2.44
SLC6A13-210ENST00000542947 KIAA0586Q9BVV6 1533 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms