RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 NISCHQ9Y2I1 1504 aa37.44■■■■□ 3.58
SPTB-205ENST00000542694 CCDC180Q9P1Z9 1646 aa33.28■■■□□ 2.92
SPTB-205ENST00000542694 ABCC9O60706 1549 aa32.53■■■□□ 2.8
SPTB-205ENST00000542694 DCAF8L2P0C7V8 631 aa31.4■■■□□ 2.62
SPTB-205ENST00000542694 RB1CC1Q8TDY2 1594 aa31.38■■■□□ 2.61
SPTB-205ENST00000542694 NACADO15069 1562 aa31.36■■■□□ 2.61
SPTB-205ENST00000542694 MYO15BQ96JP2 1530 aa31.19■■■□□ 2.58
SPTB-205ENST00000542694 ZCCHC6Q5VYS8 1495 aaKnown RBP31.14■■■□□ 2.58
SPTB-205ENST00000542694 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
SPTB-205ENST00000542694 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
SPTB-205ENST00000542694 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
SPTB-205ENST00000542694 SCRIBQ14160 1630 aa30.29■■■□□ 2.44
SPTB-205ENST00000542694 BICRAQ9NZM4 1560 aa30.28■■■□□ 2.44
SPTB-205ENST00000542694 SHROOM4Q9ULL8 1493 aa30.17■■■□□ 2.42
SPTB-205ENST00000542694 DNAJC5BQ9UF47 199 aa29.84■■■□□ 2.37
SPTB-205ENST00000542694 EIF4G1Q04637 1599 aaKnown RBP29.55■■■□□ 2.32
SPTB-205ENST00000542694 CC2D2AQ9P2K1 1620 aa29.42■■■□□ 2.3
SPTB-205ENST00000542694 CECR2Q9BXF3 1484 aa29.29■■■□□ 2.28
SPTB-205ENST00000542694 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
SPTB-205ENST00000542694 SMARCA4P51532 1647 aa29.01■■■□□ 2.23
SPTB-205ENST00000542694 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
SPTB-205ENST00000542694 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
SPTB-205ENST00000542694 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
SPTB-205ENST00000542694 MROH2BQ7Z745 1585 aa28.79■■■□□ 2.2
SPTB-205ENST00000542694 PEG3Q9GZU2 1588 aa28.76■■■□□ 2.19
SPTB-205ENST00000542694 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
SPTB-205ENST00000542694 BAZ1BQ9UIG0 1483 aaKnown RBP28.68■■■□□ 2.18
SPTB-205ENST00000542694 RSF1Q96T23 1441 aaPredicted RBP28.52■■■□□ 2.16
SPTB-205ENST00000542694 WIZO95785 1651 aa28.45■■■□□ 2.15
SPTB-205ENST00000542694 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
SPTB-205ENST00000542694 LAMC3Q9Y6N6 1575 aa28.15■■■□□ 2.1
SPTB-205ENST00000542694 ERCC6Q03468 1493 aa28.14■■■□□ 2.09
SPTB-205ENST00000542694 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
SPTB-205ENST00000542694 NESP48681 1621 aa28.1■■■□□ 2.09
SPTB-205ENST00000542694 PDS5BQ9NTI5 1447 aa28.05■■■□□ 2.08
SPTB-205ENST00000542694 CCDC88BA6NC98 1476 aa27.9■■■□□ 2.06
SPTB-205ENST00000542694 CFTRP13569 1480 aa27.89■■■□□ 2.06
SPTB-205ENST00000542694 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
SPTB-205ENST00000542694 CUX2O14529 1486 aa27.84■■■□□ 2.05
SPTB-205ENST00000542694 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
SPTB-205ENST00000542694 FANCD2Q9BXW9 1451 aa27.74■■■□□ 2.03
SPTB-205ENST00000542694 CEP164Q9UPV0 1460 aa27.71■■■□□ 2.03
SPTB-205ENST00000542694 THOC2Q8NI27 1593 aaKnown RBP27.66■■■□□ 2.02
SPTB-205ENST00000542694 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
SPTB-205ENST00000542694 PRDM2Q13029 1718 aa27.61■■■□□ 2.01
SPTB-205ENST00000542694 WDR62O43379 1518 aa27.52■■■□□ 2
SPTB-205ENST00000542694 ABCC8Q09428 1581 aa27.42■■□□□ 1.98
SPTB-205ENST00000542694 URB2Q14146 1524 aaKnown RBP27.39■■□□□ 1.98
SPTB-205ENST00000542694 TOPBP1Q92547 1522 aa27.26■■□□□ 1.96
SPTB-205ENST00000542694 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
SPTB-205ENST00000542694 IFT140Q96RY7 1462 aa27.16■■□□□ 1.94
SPTB-205ENST00000542694 DNAJC5Q9H3Z4 198 aa27.03■■□□□ 1.92
SPTB-205ENST00000542694 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
SPTB-205ENST00000542694 CUX1P39880 1505 aa27.01■■□□□ 1.91
SPTB-205ENST00000542694 SOGA1O94964 1423 aa27■■□□□ 1.91
SPTB-205ENST00000542694 FGD5Q6ZNL6 1462 aa26.95■■□□□ 1.91
SPTB-205ENST00000542694 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
SPTB-205ENST00000542694 ZNF608Q9ULD9 1512 aaPredicted RBP26.92■■□□□ 1.9
SPTB-205ENST00000542694 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
SPTB-205ENST00000542694 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
SPTB-205ENST00000542694 WDR97A6NE52 1622 aa26.83■■□□□ 1.89
SPTB-205ENST00000542694 TOP2BQ02880 1626 aa26.83■■□□□ 1.88
SPTB-205ENST00000542694 AQRO60306 1485 aaKnown RBP eCLIP26.82■■□□□ 1.88
SPTB-205ENST00000542694 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
SPTB-205ENST00000542694 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
SPTB-205ENST00000542694 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
SPTB-205ENST00000542694 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
SPTB-205ENST00000542694 SYNJ1O43426 1573 aa26.74■■□□□ 1.87
SPTB-205ENST00000542694 ABCA10Q8WWZ4 1543 aa26.74■■□□□ 1.87
SPTB-205ENST00000542694 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
SPTB-205ENST00000542694 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
SPTB-205ENST00000542694 FBLN2P98095 1184 aa26.61■■□□□ 1.85
SPTB-205ENST00000542694 MAGI1Q96QZ7 1491 aaPredicted RBP26.61■■□□□ 1.85
SPTB-205ENST00000542694 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
SPTB-205ENST00000542694 SNAPC4Q5SXM2 1469 aa26.56■■□□□ 1.84
SPTB-205ENST00000542694 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
SPTB-205ENST00000542694 PBRM1Q86U86 1689 aa26.49■■□□□ 1.83
SPTB-205ENST00000542694 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
SPTB-205ENST00000542694 CHD1O14646 1710 aa26.45■■□□□ 1.83
SPTB-205ENST00000542694 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
SPTB-205ENST00000542694 KIF27Q86VH2 1401 aa26.43■■□□□ 1.82
SPTB-205ENST00000542694 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
SPTB-205ENST00000542694 FHAD1B1AJZ9 1412 aa26.39■■□□□ 1.81
SPTB-205ENST00000542694 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
SPTB-205ENST00000542694 IGF1RP08069 1367 aa26.29■■□□□ 1.8
SPTB-205ENST00000542694 GRIN2AQ12879 1464 aa26.29■■□□□ 1.8
SPTB-205ENST00000542694 CLASP1Q7Z460 1538 aa26.2■■□□□ 1.79
SPTB-205ENST00000542694 CUL7Q14999 1698 aa26.18■■□□□ 1.78
SPTB-205ENST00000542694 ARHGEF11O15085 1522 aa26.18■■□□□ 1.78
SPTB-205ENST00000542694 NUP160Q12769 1436 aa26.17■■□□□ 1.78
SPTB-205ENST00000542694 CARMIL1Q5VZK9 1371 aa26.16■■□□□ 1.78
SPTB-205ENST00000542694 RIMBP3CA6NJZ7 1639 aa26.15■■□□□ 1.78
SPTB-205ENST00000542694 RIMBP3BA6NNM3 1639 aa26.15■■□□□ 1.78
SPTB-205ENST00000542694 RIMBP3Q9UFD9 1639 aa26.15■■□□□ 1.78
SPTB-205ENST00000542694 CEP170Q5SW79 1584 aa26.07■■□□□ 1.76
SPTB-205ENST00000542694 CYB5RLQ6IPT4 315 aa26.05■■□□□ 1.76
SPTB-205ENST00000542694 JPH4Q96JJ6 628 aa26.02■■□□□ 1.76
SPTB-205ENST00000542694 RUSC2Q8N2Y8 1516 aa26■■□□□ 1.75
SPTB-205ENST00000542694 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
SPTB-205ENST00000542694 RAPGEF2Q9Y4G8 1499 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms