RNA–Protein interactions for RNA: ENST00000542497.5

ITGB7-203, Transcript of integrin subunit beta 7, humanhuman

TSL 2

Gene ITGB7, Length 1,841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB7-203ENST00000542497 NISCHQ9Y2I1 1504 aa49.13■■■■■ 5.46
ITGB7-203ENST00000542497 CCDC180Q9P1Z9 1646 aa43.01■■■■■ 4.48
ITGB7-203ENST00000542497 ZCCHC6Q5VYS8 1495 aaKnown RBP41.25■■■■■ 4.19
ITGB7-203ENST00000542497 ABCC9O60706 1549 aa40.84■■■■■ 4.13
ITGB7-203ENST00000542497 DCAF1Q9Y4B6 1507 aa40.68■■■■■ 4.1
ITGB7-203ENST00000542497 DCAF8L2P0C7V8 631 aa40.56■■■■■ 4.08
ITGB7-203ENST00000542497 MYO15BQ96JP2 1530 aa40.31■■■■■ 4.04
ITGB7-203ENST00000542497 NACADO15069 1562 aa40.12■■■■■ 4.01
ITGB7-203ENST00000542497 RB1CC1Q8TDY2 1594 aa39.84■■■■□ 3.97
ITGB7-203ENST00000542497 SHROOM4Q9ULL8 1493 aa39.81■■■■□ 3.96
ITGB7-203ENST00000542497 SCRIBQ14160 1630 aa39.46■■■■□ 3.91
ITGB7-203ENST00000542497 UNC13AQ9UPW8 1703 aa38.9■■■■□ 3.82
ITGB7-203ENST00000542497 BICRAQ9NZM4 1560 aa38.57■■■■□ 3.77
ITGB7-203ENST00000542497 PABPN1Q86U42 306 aaKnown RBP eCLIP38.41■■■■□ 3.74
ITGB7-203ENST00000542497 SUPT5HO00267 1087 aaKnown RBP38.16■■■■□ 3.7
ITGB7-203ENST00000542497 CECR2Q9BXF3 1484 aa38.14■■■■□ 3.7
ITGB7-203ENST00000542497 BAZ1AQ9NRL2 1556 aaPredicted RBP38■■■■□ 3.67
ITGB7-203ENST00000542497 RSF1Q96T23 1441 aaPredicted RBP37.99■■■■□ 3.67
ITGB7-203ENST00000542497 MROH2BQ7Z745 1585 aa37.91■■■■□ 3.66
ITGB7-203ENST00000542497 SMARCA4P51532 1647 aa37.83■■■■□ 3.65
ITGB7-203ENST00000542497 WIZO95785 1651 aa37.56■■■■□ 3.6
ITGB7-203ENST00000542497 EIF4G1Q04637 1599 aaKnown RBP37.48■■■■□ 3.59
ITGB7-203ENST00000542497 PEG3Q9GZU2 1588 aa37.41■■■■□ 3.58
ITGB7-203ENST00000542497 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
ITGB7-203ENST00000542497 ATAD2BQ9ULI0 1458 aa37.27■■■■□ 3.56
ITGB7-203ENST00000542497 TOP2AP11388 1531 aaKnown RBP37.25■■■■□ 3.55
ITGB7-203ENST00000542497 BAZ1BQ9UIG0 1483 aaKnown RBP37.08■■■■□ 3.53
ITGB7-203ENST00000542497 NCAPD3P42695 1498 aa37.01■■■■□ 3.51
ITGB7-203ENST00000542497 HMGXB3Q12766 1538 aa36.98■■■■□ 3.51
ITGB7-203ENST00000542497 CC2D2AQ9P2K1 1620 aa36.96■■■■□ 3.51
ITGB7-203ENST00000542497 CCDC88BA6NC98 1476 aa36.81■■■■□ 3.48
ITGB7-203ENST00000542497 CHIC1Q5VXU3 224 aa36.39■■■■□ 3.42
ITGB7-203ENST00000542497 DNAJC5BQ9UF47 199 aa36.15■■■■□ 3.38
ITGB7-203ENST00000542497 CFTRP13569 1480 aa36.12■■■■□ 3.37
ITGB7-203ENST00000542497 CADPSQ9ULU8 1353 aa36.04■■■■□ 3.36
ITGB7-203ENST00000542497 TRIM41Q8WV44 630 aa35.94■■■■□ 3.34
ITGB7-203ENST00000542497 ABCC8Q09428 1581 aa35.94■■■■□ 3.34
ITGB7-203ENST00000542497 PRDM2Q13029 1718 aa35.88■■■■□ 3.33
ITGB7-203ENST00000542497 LAMC3Q9Y6N6 1575 aa35.82■■■■□ 3.32
ITGB7-203ENST00000542497 WRNQ14191 1432 aaPredicted RBP eCLIP35.81■■■■□ 3.32
ITGB7-203ENST00000542497 NESP48681 1621 aa35.75■■■■□ 3.31
ITGB7-203ENST00000542497 FANCD2Q9BXW9 1451 aa35.65■■■■□ 3.3
ITGB7-203ENST00000542497 SYNJ1O43426 1573 aa35.63■■■■□ 3.29
ITGB7-203ENST00000542497 PDS5BQ9NTI5 1447 aa35.56■■■■□ 3.28
ITGB7-203ENST00000542497 TOP2BQ02880 1626 aa35.54■■■■□ 3.28
ITGB7-203ENST00000542497 BIVM-ERCC5R4GMW8 1640 aa35.5■■■■□ 3.27
ITGB7-203ENST00000542497 CUX1P39880 1505 aa35.48■■■■□ 3.27
ITGB7-203ENST00000542497 CEP164Q9UPV0 1460 aa35.47■■■■□ 3.27
ITGB7-203ENST00000542497 KIF21AQ7Z4S6 1674 aa35.32■■■■□ 3.24
ITGB7-203ENST00000542497 DNMBPQ6XZF7 1577 aa35.29■■■■□ 3.24
ITGB7-203ENST00000542497 TOPBP1Q92547 1522 aa35.22■■■■□ 3.23
ITGB7-203ENST00000542497 FAM9AQ8IZU1 332 aaPredicted RBP35.22■■■■□ 3.23
ITGB7-203ENST00000542497 SOGA1O94964 1423 aa35.21■■■■□ 3.23
ITGB7-203ENST00000542497 EEA1Q15075 1411 aa35.19■■■■□ 3.22
ITGB7-203ENST00000542497 URB2Q14146 1524 aaKnown RBP35.19■■■■□ 3.22
ITGB7-203ENST00000542497 FGD5Q6ZNL6 1462 aa35.16■■■■□ 3.22
ITGB7-203ENST00000542497 MRC2Q9UBG0 1479 aa35.11■■■■□ 3.21
ITGB7-203ENST00000542497 ERCC6Q03468 1493 aa35.1■■■■□ 3.21
ITGB7-203ENST00000542497 RUSC2Q8N2Y8 1516 aa35.05■■■■□ 3.2
ITGB7-203ENST00000542497 POLA1P09884 1462 aaPredicted RBP35.04■■■■□ 3.2
ITGB7-203ENST00000542497 KIF27Q86VH2 1401 aa34.94■■■■□ 3.18
ITGB7-203ENST00000542497 WDR62O43379 1518 aa34.94■■■■□ 3.18
ITGB7-203ENST00000542497 LOC105371045A0A1W2PR82 267 aa34.92■■■■□ 3.18
ITGB7-203ENST00000542497 CSRNP3Q8WYN3 585 aa34.92■■■■□ 3.18
ITGB7-203ENST00000542497 CUX2O14529 1486 aa34.88■■■■□ 3.17
ITGB7-203ENST00000542497 RAD54L2Q9Y4B4 1467 aa34.87■■■■□ 3.17
ITGB7-203ENST00000542497 THOC2Q8NI27 1593 aaKnown RBP34.87■■■■□ 3.17
ITGB7-203ENST00000542497 ABCA10Q8WWZ4 1543 aa34.86■■■■□ 3.17
ITGB7-203ENST00000542497 WDR97A6NE52 1622 aa34.75■■■■□ 3.15
ITGB7-203ENST00000542497 KIF21BO75037 1637 aa34.71■■■■□ 3.15
ITGB7-203ENST00000542497 TARBP1Q13395 1621 aaKnown RBP34.7■■■■□ 3.15
ITGB7-203ENST00000542497 EHMT2Q96KQ7 1210 aa34.69■■■■□ 3.14
ITGB7-203ENST00000542497 GOLGA3Q08378 1498 aa34.67■■■■□ 3.14
ITGB7-203ENST00000542497 IFT140Q96RY7 1462 aa34.65■■■■□ 3.14
ITGB7-203ENST00000542497 PRXQ9BXM0 1461 aa34.61■■■■□ 3.13
ITGB7-203ENST00000542497 ABCA5Q8WWZ7 1642 aa34.59■■■■□ 3.13
ITGB7-203ENST00000542497 IGF1RP08069 1367 aa34.59■■■■□ 3.13
ITGB7-203ENST00000542497 ERICH3Q5RHP9 1530 aa34.56■■■■□ 3.12
ITGB7-203ENST00000542497 TDRD9Q8NDG6 1382 aaKnown RBP34.55■■■■□ 3.12
ITGB7-203ENST00000542497 GAPVD1Q14C86 1478 aa34.53■■■■□ 3.12
ITGB7-203ENST00000542497 RAPGEF2Q9Y4G8 1499 aa34.53■■■■□ 3.12
ITGB7-203ENST00000542497 TNIKQ9UKE5 1360 aa34.48■■■■□ 3.11
ITGB7-203ENST00000542497 UBTFP17480 764 aaKnown RBP34.46■■■■□ 3.11
ITGB7-203ENST00000542497 CARMIL1Q5VZK9 1371 aa34.44■■■■□ 3.1
ITGB7-203ENST00000542497 CUL7Q14999 1698 aa34.42■■■■□ 3.1
ITGB7-203ENST00000542497 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
ITGB7-203ENST00000542497 AQRO60306 1485 aaKnown RBP eCLIP34.38■■■■□ 3.09
ITGB7-203ENST00000542497 PBRM1Q86U86 1689 aa34.33■■■■□ 3.09
ITGB7-203ENST00000542497 GRIN2BQ13224 1484 aa34.33■■■■□ 3.09
ITGB7-203ENST00000542497 EIF4G3O43432 1585 aaKnown RBP34.32■■■■□ 3.09
ITGB7-203ENST00000542497 CEP162Q5TB80 1403 aa34.28■■■■□ 3.08
ITGB7-203ENST00000542497 ADAMTS12P58397 1594 aa34.18■■■■□ 3.06
ITGB7-203ENST00000542497 FHAD1B1AJZ9 1412 aa34.17■■■■□ 3.06
ITGB7-203ENST00000542497 SNAPC4Q5SXM2 1469 aa34.11■■■■□ 3.05
ITGB7-203ENST00000542497 CLIP1P30622 1438 aa34.09■■■■□ 3.05
ITGB7-203ENST00000542497 MAGI1Q96QZ7 1491 aaPredicted RBP34.08■■■■□ 3.05
ITGB7-203ENST00000542497 CTTNBP2Q8WZ74 1663 aa33.95■■■■□ 3.03
ITGB7-203ENST00000542497 SYNJ2O15056 1496 aa33.94■■■■□ 3.02
ITGB7-203ENST00000542497 RANGAP1P46060 587 aaPredicted RBP33.93■■■■□ 3.02
ITGB7-203ENST00000542497 GRIN2AQ12879 1464 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms