RNA–Protein interactions for RNA: ENST00000542492.1

NCAPD2-212, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 5

Gene NCAPD2, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-212ENST00000542492 NISCHQ9Y2I1 1504 aa30.12■■■□□ 2.41
NCAPD2-212ENST00000542492 ABCC9O60706 1549 aa27.91■■■□□ 2.06
NCAPD2-212ENST00000542492 CCDC180Q9P1Z9 1646 aa27.17■■□□□ 1.94
NCAPD2-212ENST00000542492 DNAJC5BQ9UF47 199 aa26.76■■□□□ 1.87
NCAPD2-212ENST00000542492 RB1CC1Q8TDY2 1594 aa26.22■■□□□ 1.79
NCAPD2-212ENST00000542492 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
NCAPD2-212ENST00000542492 NACADO15069 1562 aa25.9■■□□□ 1.74
NCAPD2-212ENST00000542492 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
NCAPD2-212ENST00000542492 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.68
NCAPD2-212ENST00000542492 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
NCAPD2-212ENST00000542492 MYO15BQ96JP2 1530 aa25.34■■□□□ 1.65
NCAPD2-212ENST00000542492 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
NCAPD2-212ENST00000542492 CC2D2AQ9P2K1 1620 aa25.11■■□□□ 1.61
NCAPD2-212ENST00000542492 SHROOM4Q9ULL8 1493 aa25.06■■□□□ 1.6
NCAPD2-212ENST00000542492 DNAJC5Q9H3Z4 198 aa24.97■■□□□ 1.59
NCAPD2-212ENST00000542492 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
NCAPD2-212ENST00000542492 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.56
NCAPD2-212ENST00000542492 SCRIBQ14160 1630 aa24.8■■□□□ 1.56
NCAPD2-212ENST00000542492 DCAF1Q9Y4B6 1507 aa24.8■■□□□ 1.56
NCAPD2-212ENST00000542492 CUX2O14529 1486 aa24.24■■□□□ 1.47
NCAPD2-212ENST00000542492 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
NCAPD2-212ENST00000542492 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
NCAPD2-212ENST00000542492 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
NCAPD2-212ENST00000542492 NESP48681 1621 aa23.8■■□□□ 1.4
NCAPD2-212ENST00000542492 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
NCAPD2-212ENST00000542492 SMARCA2P51531 1590 aa23.66■■□□□ 1.38
NCAPD2-212ENST00000542492 TRIM41Q8WV44 630 aa23.66■■□□□ 1.38
NCAPD2-212ENST00000542492 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
NCAPD2-212ENST00000542492 SMARCA4P51532 1647 aa23.58■■□□□ 1.36
NCAPD2-212ENST00000542492 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
NCAPD2-212ENST00000542492 LAMC3Q9Y6N6 1575 aa23.47■■□□□ 1.35
NCAPD2-212ENST00000542492 PDS5BQ9NTI5 1447 aa23.4■■□□□ 1.34
NCAPD2-212ENST00000542492 BAZ1AQ9NRL2 1556 aaPredicted RBP23.4■■□□□ 1.34
NCAPD2-212ENST00000542492 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
NCAPD2-212ENST00000542492 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
NCAPD2-212ENST00000542492 CADPSQ9ULU8 1353 aa23.23■■□□□ 1.31
NCAPD2-212ENST00000542492 MRC2Q9UBG0 1479 aa23.23■■□□□ 1.31
NCAPD2-212ENST00000542492 MROH2BQ7Z745 1585 aa23.22■■□□□ 1.31
NCAPD2-212ENST00000542492 WDR62O43379 1518 aa23.17■■□□□ 1.3
NCAPD2-212ENST00000542492 OSCARQ8IYS5 282 aa23.09■■□□□ 1.29
NCAPD2-212ENST00000542492 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
NCAPD2-212ENST00000542492 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.26
NCAPD2-212ENST00000542492 WIZO95785 1651 aa22.86■■□□□ 1.25
NCAPD2-212ENST00000542492 CFTRP13569 1480 aa22.82■■□□□ 1.24
NCAPD2-212ENST00000542492 URB2Q14146 1524 aaKnown RBP22.8■■□□□ 1.24
NCAPD2-212ENST00000542492 RIMBP3CA6NJZ7 1639 aa22.79■■□□□ 1.24
NCAPD2-212ENST00000542492 RIMBP3BA6NNM3 1639 aa22.79■■□□□ 1.24
NCAPD2-212ENST00000542492 RIMBP3Q9UFD9 1639 aa22.79■■□□□ 1.24
NCAPD2-212ENST00000542492 ARHGEF11O15085 1522 aa22.69■■□□□ 1.22
NCAPD2-212ENST00000542492 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
NCAPD2-212ENST00000542492 CYB5RLQ6IPT4 315 aa22.62■■□□□ 1.21
NCAPD2-212ENST00000542492 IFT140Q96RY7 1462 aa22.58■■□□□ 1.2
NCAPD2-212ENST00000542492 TRHP20396 242 aaPredicted RBP22.56■■□□□ 1.2
NCAPD2-212ENST00000542492 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
NCAPD2-212ENST00000542492 RSF1Q96T23 1441 aaPredicted RBP22.54■■□□□ 1.2
NCAPD2-212ENST00000542492 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
NCAPD2-212ENST00000542492 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
NCAPD2-212ENST00000542492 EIF4G3O43432 1585 aaKnown RBP22.41■■□□□ 1.18
NCAPD2-212ENST00000542492 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.172e-7■■■■■ 27.8
NCAPD2-212ENST00000542492 FBLN2P98095 1184 aa22.37■■□□□ 1.17
NCAPD2-212ENST00000542492 PRDM2Q13029 1718 aa22.35■■□□□ 1.17
NCAPD2-212ENST00000542492 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
NCAPD2-212ENST00000542492 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
NCAPD2-212ENST00000542492 ABCC8Q09428 1581 aa22.32■■□□□ 1.16
NCAPD2-212ENST00000542492 CHD1O14646 1710 aa22.3■■□□□ 1.16
NCAPD2-212ENST00000542492 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
NCAPD2-212ENST00000542492 TARBP1Q13395 1621 aaKnown RBP22.25■■□□□ 1.15
NCAPD2-212ENST00000542492 POLA1P09884 1462 aaPredicted RBP22.18■■□□□ 1.14
NCAPD2-212ENST00000542492 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
NCAPD2-212ENST00000542492 RAD54L2Q9Y4B4 1467 aa22.14■■□□□ 1.13
NCAPD2-212ENST00000542492 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
NCAPD2-212ENST00000542492 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
NCAPD2-212ENST00000542492 SOGA1O94964 1423 aa22.09■■□□□ 1.13
NCAPD2-212ENST00000542492 CHMP7Q8WUX9 453 aaPredicted RBP22.08■■□□□ 1.13
NCAPD2-212ENST00000542492 SYNJ1O43426 1573 aa22.02■■□□□ 1.12
NCAPD2-212ENST00000542492 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
NCAPD2-212ENST00000542492 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
NCAPD2-212ENST00000542492 GAPVD1Q14C86 1478 aa21.95■■□□□ 1.1
NCAPD2-212ENST00000542492 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
NCAPD2-212ENST00000542492 WDR97A6NE52 1622 aa21.93■■□□□ 1.1
NCAPD2-212ENST00000542492 SYNJ2O15056 1496 aa21.93■■□□□ 1.1
NCAPD2-212ENST00000542492 CUX1P39880 1505 aa21.84■■□□□ 1.09
NCAPD2-212ENST00000542492 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
NCAPD2-212ENST00000542492 PBRM1Q86U86 1689 aa21.71■■□□□ 1.07
NCAPD2-212ENST00000542492 ABCA10Q8WWZ4 1543 aa21.66■■□□□ 1.06
NCAPD2-212ENST00000542492 GRIN2AQ12879 1464 aa21.66■■□□□ 1.06
NCAPD2-212ENST00000542492 ABCA5Q8WWZ7 1642 aa21.64■■□□□ 1.05
NCAPD2-212ENST00000542492 CEP170Q5SW79 1584 aa21.64■■□□□ 1.05
NCAPD2-212ENST00000542492 NUP160Q12769 1436 aa21.62■■□□□ 1.05
NCAPD2-212ENST00000542492 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
NCAPD2-212ENST00000542492 SHROOM2Q13796 1616 aa21.52■■□□□ 1.04
NCAPD2-212ENST00000542492 KIF13AQ9H1H9 1805 aa21.51■■□□□ 1.03
NCAPD2-212ENST00000542492 FAM69CQ0P6D2 419 aa21.5■■□□□ 1.03
NCAPD2-212ENST00000542492 FHAD1B1AJZ9 1412 aa21.49■■□□□ 1.03
NCAPD2-212ENST00000542492 WRNQ14191 1432 aaPredicted RBP eCLIP21.47■■□□□ 1.03
NCAPD2-212ENST00000542492 PRG4Q92954 1404 aaPredicted RBP21.47■■□□□ 1.03
NCAPD2-212ENST00000542492 KDM4FA0A1W2PPD8 638 aa21.45■■□□□ 1.02
NCAPD2-212ENST00000542492 ABCC10Q5T3U5 1492 aa21.45■■□□□ 1.02
NCAPD2-212ENST00000542492 ILDR1Q86SU0 546 aaPredicted RBP21.43■■□□□ 1.02
NCAPD2-212ENST00000542492 JPH4Q96JJ6 628 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms