RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
NECAP1-206ENST00000542095 CCDC180Q9P1Z9 1646 aa20.37■□□□□ 0.85
NECAP1-206ENST00000542095 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
NECAP1-206ENST00000542095 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
NECAP1-206ENST00000542095 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
NECAP1-206ENST00000542095 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
NECAP1-206ENST00000542095 MYO15BQ96JP2 1530 aa19.05■□□□□ 0.64
NECAP1-206ENST00000542095 SUPT5HO00267 1087 aaKnown RBP18.99■□□□□ 0.63
NECAP1-206ENST00000542095 ABCC9O60706 1549 aa18.9■□□□□ 0.62
NECAP1-206ENST00000542095 NACADO15069 1562 aa18.85■□□□□ 0.61
NECAP1-206ENST00000542095 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
NECAP1-206ENST00000542095 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
NECAP1-206ENST00000542095 RSF1Q96T23 1441 aaPredicted RBP18.42■□□□□ 0.54
NECAP1-206ENST00000542095 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
NECAP1-206ENST00000542095 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.52
NECAP1-206ENST00000542095 CECR2Q9BXF3 1484 aa18.27■□□□□ 0.52
NECAP1-206ENST00000542095 MROH2BQ7Z745 1585 aa18.22■□□□□ 0.51
NECAP1-206ENST00000542095 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
NECAP1-206ENST00000542095 WIZO95785 1651 aa18.13■□□□□ 0.49
NECAP1-206ENST00000542095 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
NECAP1-206ENST00000542095 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
NECAP1-206ENST00000542095 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
NECAP1-206ENST00000542095 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
NECAP1-206ENST00000542095 TRIM41Q8WV44 630 aa17.81■□□□□ 0.44
NECAP1-206ENST00000542095 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
NECAP1-206ENST00000542095 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
NECAP1-206ENST00000542095 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
NECAP1-206ENST00000542095 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
NECAP1-206ENST00000542095 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
NECAP1-206ENST00000542095 ATAD2BQ9ULI0 1458 aa17.61■□□□□ 0.41
NECAP1-206ENST00000542095 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
NECAP1-206ENST00000542095 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
NECAP1-206ENST00000542095 FAM9AQ8IZU1 332 aaPredicted RBP17.52■□□□□ 0.4
NECAP1-206ENST00000542095 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
NECAP1-206ENST00000542095 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
NECAP1-206ENST00000542095 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
NECAP1-206ENST00000542095 PCGF6Q9BYE7 350 aa17.33■□□□□ 0.37
NECAP1-206ENST00000542095 EEA1Q15075 1411 aa17.29■□□□□ 0.36
NECAP1-206ENST00000542095 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
NECAP1-206ENST00000542095 SYNJ1O43426 1573 aa17.27■□□□□ 0.36
NECAP1-206ENST00000542095 SOGA1O94964 1423 aa17.25■□□□□ 0.35
NECAP1-206ENST00000542095 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
NECAP1-206ENST00000542095 RUSC2Q8N2Y8 1516 aa17.17■□□□□ 0.34
NECAP1-206ENST00000542095 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
NECAP1-206ENST00000542095 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
NECAP1-206ENST00000542095 HRCP23327 699 aa17.15■□□□□ 0.34
NECAP1-206ENST00000542095 BIVM-ERCC5R4GMW8 1640 aa17.15■□□□□ 0.34
NECAP1-206ENST00000542095 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
NECAP1-206ENST00000542095 CC2D2AQ9P2K1 1620 aa17.13■□□□□ 0.33
NECAP1-206ENST00000542095 CFTRP13569 1480 aa17.11■□□□□ 0.33
NECAP1-206ENST00000542095 TNIKQ9UKE5 1360 aa17.1■□□□□ 0.33
NECAP1-206ENST00000542095 GOLGA3Q08378 1498 aa17.09■□□□□ 0.33
NECAP1-206ENST00000542095 KIF21BO75037 1637 aa17.08■□□□□ 0.32
NECAP1-206ENST00000542095 CEP162Q5TB80 1403 aa17.05■□□□□ 0.32
NECAP1-206ENST00000542095 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
NECAP1-206ENST00000542095 CUX1P39880 1505 aa17.01■□□□□ 0.31
NECAP1-206ENST00000542095 UBTFP17480 764 aaKnown RBP17.01■□□□□ 0.31
NECAP1-206ENST00000542095 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
NECAP1-206ENST00000542095 RAPGEF2Q9Y4G8 1499 aa16.89■□□□□ 0.29
NECAP1-206ENST00000542095 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
NECAP1-206ENST00000542095 KIF27Q86VH2 1401 aa16.86■□□□□ 0.29
NECAP1-206ENST00000542095 PPARGC1BQ86YN6 1023 aaKnown RBP16.85■□□□□ 0.29
NECAP1-206ENST00000542095 PRXQ9BXM0 1461 aa16.83■□□□□ 0.28
NECAP1-206ENST00000542095 CLIP1P30622 1438 aa16.83■□□□□ 0.28
NECAP1-206ENST00000542095 FANCD2Q9BXW9 1451 aa16.8■□□□□ 0.28
NECAP1-206ENST00000542095 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
NECAP1-206ENST00000542095 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
NECAP1-206ENST00000542095 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
NECAP1-206ENST00000542095 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
NECAP1-206ENST00000542095 VPS8Q8N3P4 1428 aa16.73■□□□□ 0.27
NECAP1-206ENST00000542095 CUX2O14529 1486 aa16.73■□□□□ 0.27
NECAP1-206ENST00000542095 NESP48681 1621 aa16.72■□□□□ 0.27
NECAP1-206ENST00000542095 TOPBP1Q92547 1522 aa16.67■□□□□ 0.26
NECAP1-206ENST00000542095 TTBK1Q5TCY1 1321 aaPredicted RBP16.65■□□□□ 0.26
NECAP1-206ENST00000542095 IGF1RP08069 1367 aa16.65■□□□□ 0.26
NECAP1-206ENST00000542095 RANGAP1P46060 587 aaPredicted RBP16.63■□□□□ 0.25
NECAP1-206ENST00000542095 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
NECAP1-206ENST00000542095 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
NECAP1-206ENST00000542095 ABCA10Q8WWZ4 1543 aa16.61■□□□□ 0.25
NECAP1-206ENST00000542095 APLP2Q06481 763 aa16.61■□□□□ 0.25
NECAP1-206ENST00000542095 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
NECAP1-206ENST00000542095 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
NECAP1-206ENST00000542095 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
NECAP1-206ENST00000542095 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
NECAP1-206ENST00000542095 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
NECAP1-206ENST00000542095 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
NECAP1-206ENST00000542095 CUL7Q14999 1698 aa16.54■□□□□ 0.24
NECAP1-206ENST00000542095 ARHGAP35Q9NRY4 1499 aa16.53■□□□□ 0.24
NECAP1-206ENST00000542095 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
NECAP1-206ENST00000542095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
NECAP1-206ENST00000542095 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
NECAP1-206ENST00000542095 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
NECAP1-206ENST00000542095 CTTNBP2Q8WZ74 1663 aa16.45■□□□□ 0.22
NECAP1-206ENST00000542095 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
NECAP1-206ENST00000542095 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
NECAP1-206ENST00000542095 EFCAB5A4FU69 1503 aa16.37■□□□□ 0.21
NECAP1-206ENST00000542095 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
NECAP1-206ENST00000542095 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
NECAP1-206ENST00000542095 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
NECAP1-206ENST00000542095 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms