RNA–Protein interactions for RNA: ENST00000541969.1

USP5-205, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 3

Gene USP5, Length 766 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-205ENST00000541969 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
USP5-205ENST00000541969 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
USP5-205ENST00000541969 ABCC9O60706 1549 aa25.17■■□□□ 1.62
USP5-205ENST00000541969 DCAF8L2P0C7V8 631 aa24.22■■□□□ 1.47
USP5-205ENST00000541969 RB1CC1Q8TDY2 1594 aa24.09■■□□□ 1.45
USP5-205ENST00000541969 NACADO15069 1562 aa24■■□□□ 1.43
USP5-205ENST00000541969 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
USP5-205ENST00000541969 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
USP5-205ENST00000541969 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
USP5-205ENST00000541969 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
USP5-205ENST00000541969 UNC13AQ9UPW8 1703 aa23.46■■□□□ 1.35
USP5-205ENST00000541969 BICRAQ9NZM4 1560 aa23.29■■□□□ 1.32
USP5-205ENST00000541969 SCRIBQ14160 1630 aa23.27■■□□□ 1.32
USP5-205ENST00000541969 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
USP5-205ENST00000541969 SHROOM4Q9ULL8 1493 aa23.03■■□□□ 1.28
USP5-205ENST00000541969 EIF4G1Q04637 1599 aaKnown RBP22.74■■□□□ 1.23
USP5-205ENST00000541969 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
USP5-205ENST00000541969 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
USP5-205ENST00000541969 SMARCA4P51532 1647 aa22.2■■□□□ 1.14
USP5-205ENST00000541969 BAZ1AQ9NRL2 1556 aaPredicted RBP22.17■■□□□ 1.14
USP5-205ENST00000541969 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
USP5-205ENST00000541969 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
USP5-205ENST00000541969 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
USP5-205ENST00000541969 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
USP5-205ENST00000541969 BAZ1BQ9UIG0 1483 aaKnown RBP21.99■■□□□ 1.11
USP5-205ENST00000541969 HMGXB3Q12766 1538 aa21.99■■□□□ 1.11
USP5-205ENST00000541969 PEG3Q9GZU2 1588 aa21.93■■□□□ 1.1
USP5-205ENST00000541969 WIZO95785 1651 aa21.79■■□□□ 1.08
USP5-205ENST00000541969 ERCC6Q03468 1493 aa21.76■■□□□ 1.07
USP5-205ENST00000541969 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
USP5-205ENST00000541969 NESP48681 1621 aa21.69■■□□□ 1.06
USP5-205ENST00000541969 LAMC3Q9Y6N6 1575 aa21.6■■□□□ 1.05
USP5-205ENST00000541969 CADPSQ9ULU8 1353 aa21.55■■□□□ 1.04
USP5-205ENST00000541969 TOP2AP11388 1531 aaKnown RBP21.53■■□□□ 1.04
USP5-205ENST00000541969 PDS5BQ9NTI5 1447 aa21.53■■□□□ 1.04
USP5-205ENST00000541969 CUX2O14529 1486 aa21.5■■□□□ 1.03
USP5-205ENST00000541969 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
USP5-205ENST00000541969 CFTRP13569 1480 aa21.33■■□□□ 1.01
USP5-205ENST00000541969 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
USP5-205ENST00000541969 CCDC88BA6NC98 1476 aa21.32■■□□□ 1
USP5-205ENST00000541969 FANCD2Q9BXW9 1451 aa21.29■■□□□ 1
USP5-205ENST00000541969 CEP164Q9UPV0 1460 aa21.29■■□□□ 1
USP5-205ENST00000541969 MRC2Q9UBG0 1479 aa21.27■■□□□ 1
USP5-205ENST00000541969 DNAJC5Q9H3Z4 198 aa21.27■■□□□ 1
USP5-205ENST00000541969 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
USP5-205ENST00000541969 WDR62O43379 1518 aa21.15■□□□□ 0.98
USP5-205ENST00000541969 PRDM2Q13029 1718 aa21.1■□□□□ 0.97
USP5-205ENST00000541969 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
USP5-205ENST00000541969 ABCC8Q09428 1581 aa20.93■□□□□ 0.94
USP5-205ENST00000541969 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
USP5-205ENST00000541969 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
USP5-205ENST00000541969 IFT140Q96RY7 1462 aa20.83■□□□□ 0.93
USP5-205ENST00000541969 ZNF608Q9ULD9 1512 aaPredicted RBP20.74■□□□□ 0.91
USP5-205ENST00000541969 POLA1P09884 1462 aaPredicted RBP20.71■□□□□ 0.91
USP5-205ENST00000541969 SOGA1O94964 1423 aa20.7■□□□□ 0.9
USP5-205ENST00000541969 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
USP5-205ENST00000541969 RAD54L2Q9Y4B4 1467 aa20.67■□□□□ 0.9
USP5-205ENST00000541969 CUX1P39880 1505 aa20.67■□□□□ 0.9
USP5-205ENST00000541969 FGD5Q6ZNL6 1462 aa20.66■□□□□ 0.9
USP5-205ENST00000541969 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.9
USP5-205ENST00000541969 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.9
USP5-205ENST00000541969 EIF4G3O43432 1585 aaKnown RBP20.62■□□□□ 0.89
USP5-205ENST00000541969 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
USP5-205ENST00000541969 FBLN2P98095 1184 aa20.58■□□□□ 0.89
USP5-205ENST00000541969 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
USP5-205ENST00000541969 WDR97A6NE52 1622 aa20.47■□□□□ 0.87
USP5-205ENST00000541969 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
USP5-205ENST00000541969 TRIM41Q8WV44 630 aa20.45■□□□□ 0.86
USP5-205ENST00000541969 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
USP5-205ENST00000541969 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
USP5-205ENST00000541969 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
USP5-205ENST00000541969 SNAPC4Q5SXM2 1469 aa20.43■□□□□ 0.86
USP5-205ENST00000541969 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
USP5-205ENST00000541969 ABCA10Q8WWZ4 1543 aa20.42■□□□□ 0.86
USP5-205ENST00000541969 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
USP5-205ENST00000541969 CHD1O14646 1710 aa20.4■□□□□ 0.86
USP5-205ENST00000541969 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
USP5-205ENST00000541969 PBRM1Q86U86 1689 aa20.33■□□□□ 0.85
USP5-205ENST00000541969 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
USP5-205ENST00000541969 SYNJ2O15056 1496 aa20.31■□□□□ 0.84
USP5-205ENST00000541969 RIMBP3CA6NJZ7 1639 aa20.26■□□□□ 0.83
USP5-205ENST00000541969 RIMBP3BA6NNM3 1639 aa20.26■□□□□ 0.83
USP5-205ENST00000541969 RIMBP3Q9UFD9 1639 aa20.26■□□□□ 0.83
USP5-205ENST00000541969 ARHGEF11O15085 1522 aa20.24■□□□□ 0.83
USP5-205ENST00000541969 CYB5RLQ6IPT4 315 aa20.21■□□□□ 0.83
USP5-205ENST00000541969 ERICH3Q5RHP9 1530 aa20.18■□□□□ 0.82
USP5-205ENST00000541969 FHAD1B1AJZ9 1412 aa20.18■□□□□ 0.82
USP5-205ENST00000541969 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
USP5-205ENST00000541969 ADAMTS12P58397 1594 aa20.15■□□□□ 0.82
USP5-205ENST00000541969 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
USP5-205ENST00000541969 KIF27Q86VH2 1401 aa20.14■□□□□ 0.81
USP5-205ENST00000541969 IGF1RP08069 1367 aa20.06■□□□□ 0.8
USP5-205ENST00000541969 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
USP5-205ENST00000541969 NUP160Q12769 1436 aa20.04■□□□□ 0.8
USP5-205ENST00000541969 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
USP5-205ENST00000541969 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
USP5-205ENST00000541969 JPH4Q96JJ6 628 aa19.97■□□□□ 0.79
USP5-205ENST00000541969 CUL7Q14999 1698 aa19.96■□□□□ 0.79
USP5-205ENST00000541969 TRHP20396 242 aaPredicted RBP19.92■□□□□ 0.78
USP5-205ENST00000541969 PRG4Q92954 1404 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms