RNA–Protein interactions for RNA: ENST00000541967.1

ARF3-209, Transcript of ADP ribosylation factor 3, humanhuman

TSL 4

Gene ARF3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-209ENST00000541967 NISCHQ9Y2I1 1504 aa42.2■■■■■ 4.35
ARF3-209ENST00000541967 CCDC180Q9P1Z9 1646 aa37.46■■■■□ 3.59
ARF3-209ENST00000541967 ABCC9O60706 1549 aa36.17■■■■□ 3.38
ARF3-209ENST00000541967 ZCCHC6Q5VYS8 1495 aaKnown RBP35.24■■■■□ 3.23
ARF3-209ENST00000541967 NACADO15069 1562 aa35.05■■■■□ 3.2
ARF3-209ENST00000541967 RB1CC1Q8TDY2 1594 aa35■■■■□ 3.19
ARF3-209ENST00000541967 MYO15BQ96JP2 1530 aa34.97■■■■□ 3.19
ARF3-209ENST00000541967 DCAF1Q9Y4B6 1507 aa34.96■■■■□ 3.19
ARF3-209ENST00000541967 DCAF8L2P0C7V8 631 aa34.93■■■■□ 3.18
ARF3-209ENST00000541967 UNC13AQ9UPW8 1703 aa34.4■■■■□ 3.1
ARF3-209ENST00000541967 SCRIBQ14160 1630 aa34.12■■■■□ 3.05
ARF3-209ENST00000541967 BICRAQ9NZM4 1560 aa33.98■■■■□ 3.03
ARF3-209ENST00000541967 DNAJC5BQ9UF47 199 aa33.98■■■■□ 3.03
ARF3-209ENST00000541967 PABPN1Q86U42 306 aaKnown RBP eCLIP33.79■■■■□ 3
ARF3-209ENST00000541967 SHROOM4Q9ULL8 1493 aa33.6■■■□□ 2.97
ARF3-209ENST00000541967 EIF4G1Q04637 1599 aaKnown RBP33.02■■■□□ 2.88
ARF3-209ENST00000541967 CECR2Q9BXF3 1484 aa32.81■■■□□ 2.84
ARF3-209ENST00000541967 CC2D2AQ9P2K1 1620 aa32.81■■■□□ 2.84
ARF3-209ENST00000541967 SMARCA4P51532 1647 aa32.71■■■□□ 2.83
ARF3-209ENST00000541967 BAZ1AQ9NRL2 1556 aaPredicted RBP32.67■■■□□ 2.82
ARF3-209ENST00000541967 MROH2BQ7Z745 1585 aa32.52■■■□□ 2.8
ARF3-209ENST00000541967 PEG3Q9GZU2 1588 aa32.4■■■□□ 2.78
ARF3-209ENST00000541967 ATAD2BQ9ULI0 1458 aa32.38■■■□□ 2.77
ARF3-209ENST00000541967 SMARCA2P51531 1590 aa32.37■■■□□ 2.77
ARF3-209ENST00000541967 NCAPD3P42695 1498 aa32.3■■■□□ 2.76
ARF3-209ENST00000541967 WIZO95785 1651 aa32.24■■■□□ 2.75
ARF3-209ENST00000541967 RSF1Q96T23 1441 aaPredicted RBP32.24■■■□□ 2.75
ARF3-209ENST00000541967 HMGXB3Q12766 1538 aa32.22■■■□□ 2.75
ARF3-209ENST00000541967 BAZ1BQ9UIG0 1483 aaKnown RBP32.11■■■□□ 2.73
ARF3-209ENST00000541967 DNAJC5Q9H3Z4 198 aa31.89■■■□□ 2.7
ARF3-209ENST00000541967 TOP2AP11388 1531 aaKnown RBP31.89■■■□□ 2.7
ARF3-209ENST00000541967 SUPT5HO00267 1087 aaKnown RBP31.58■■■□□ 2.65
ARF3-209ENST00000541967 CCDC88BA6NC98 1476 aa31.47■■■□□ 2.63
ARF3-209ENST00000541967 LAMC3Q9Y6N6 1575 aa31.44■■■□□ 2.62
ARF3-209ENST00000541967 NESP48681 1621 aa31.43■■■□□ 2.62
ARF3-209ENST00000541967 CADPSQ9ULU8 1353 aa31.34■■■□□ 2.61
ARF3-209ENST00000541967 PRDM2Q13029 1718 aa31.27■■■□□ 2.6
ARF3-209ENST00000541967 CFTRP13569 1480 aa31.27■■■□□ 2.6
ARF3-209ENST00000541967 KIF21AQ7Z4S6 1674 aa31.19■■■□□ 2.58
ARF3-209ENST00000541967 PDS5BQ9NTI5 1447 aa31.13■■■□□ 2.57
ARF3-209ENST00000541967 ERCC6Q03468 1493 aa31.11■■■□□ 2.57
ARF3-209ENST00000541967 FANCD2Q9BXW9 1451 aa31.01■■■□□ 2.55
ARF3-209ENST00000541967 THOC2Q8NI27 1593 aaKnown RBP30.96■■■□□ 2.55
ARF3-209ENST00000541967 CEP164Q9UPV0 1460 aa30.94■■■□□ 2.54
ARF3-209ENST00000541967 MRC2Q9UBG0 1479 aa30.83■■■□□ 2.53
ARF3-209ENST00000541967 WDR62O43379 1518 aa30.76■■■□□ 2.51
ARF3-209ENST00000541967 CUX2O14529 1486 aa30.71■■■□□ 2.51
ARF3-209ENST00000541967 URB2Q14146 1524 aaKnown RBP30.71■■■□□ 2.51
ARF3-209ENST00000541967 DNMBPQ6XZF7 1577 aa30.6■■■□□ 2.49
ARF3-209ENST00000541967 ABCC8Q09428 1581 aa30.58■■■□□ 2.49
ARF3-209ENST00000541967 TOPBP1Q92547 1522 aa30.58■■■□□ 2.49
ARF3-209ENST00000541967 CUX1P39880 1505 aa30.49■■■□□ 2.47
ARF3-209ENST00000541967 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
ARF3-209ENST00000541967 WRNQ14191 1432 aaPredicted RBP eCLIP30.37■■■□□ 2.45
ARF3-209ENST00000541967 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
ARF3-209ENST00000541967 TOP2BQ02880 1626 aa30.35■■■□□ 2.45
ARF3-209ENST00000541967 POLA1P09884 1462 aaPredicted RBP30.33■■■□□ 2.45
ARF3-209ENST00000541967 FGD5Q6ZNL6 1462 aa30.31■■■□□ 2.44
ARF3-209ENST00000541967 IFT140Q96RY7 1462 aa30.28■■■□□ 2.44
ARF3-209ENST00000541967 TARBP1Q13395 1621 aaKnown RBP30.28■■■□□ 2.44
ARF3-209ENST00000541967 RAD54L2Q9Y4B4 1467 aa30.19■■■□□ 2.42
ARF3-209ENST00000541967 WDR97A6NE52 1622 aa30.18■■■□□ 2.42
ARF3-209ENST00000541967 SOGA1O94964 1423 aa30.17■■■□□ 2.42
ARF3-209ENST00000541967 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
ARF3-209ENST00000541967 EIF4G3O43432 1585 aaKnown RBP30.08■■■□□ 2.41
ARF3-209ENST00000541967 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
ARF3-209ENST00000541967 TRIM41Q8WV44 630 aa29.99■■■□□ 2.39
ARF3-209ENST00000541967 AQRO60306 1485 aaKnown RBP eCLIP29.97■■■□□ 2.39
ARF3-209ENST00000541967 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
ARF3-209ENST00000541967 TDRD9Q8NDG6 1382 aaKnown RBP29.94■■■□□ 2.38
ARF3-209ENST00000541967 PBRM1Q86U86 1689 aa29.91■■■□□ 2.38
ARF3-209ENST00000541967 GAPVD1Q14C86 1478 aa29.85■■■□□ 2.37
ARF3-209ENST00000541967 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
ARF3-209ENST00000541967 CHIC1Q5VXU3 224 aa29.73■■■□□ 2.35
ARF3-209ENST00000541967 SNAPC4Q5SXM2 1469 aa29.73■■■□□ 2.35
ARF3-209ENST00000541967 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
ARF3-209ENST00000541967 MAGI1Q96QZ7 1491 aaPredicted RBP29.7■■■□□ 2.35
ARF3-209ENST00000541967 CHD1O14646 1710 aa29.7■■■□□ 2.34
ARF3-209ENST00000541967 KIF27Q86VH2 1401 aa29.7■■■□□ 2.34
ARF3-209ENST00000541967 ADAMTS12P58397 1594 aa29.63■■■□□ 2.33
ARF3-209ENST00000541967 RUSC2Q8N2Y8 1516 aa29.59■■■□□ 2.33
ARF3-209ENST00000541967 SYNJ2O15056 1496 aa29.57■■■□□ 2.32
ARF3-209ENST00000541967 CUL7Q14999 1698 aa29.55■■■□□ 2.32
ARF3-209ENST00000541967 IGF1RP08069 1367 aa29.53■■■□□ 2.32
ARF3-209ENST00000541967 FHAD1B1AJZ9 1412 aa29.52■■■□□ 2.32
ARF3-209ENST00000541967 CHMP7Q8WUX9 453 aaPredicted RBP29.45■■■□□ 2.31
ARF3-209ENST00000541967 GRIN2AQ12879 1464 aa29.44■■■□□ 2.3
ARF3-209ENST00000541967 FBLN2P98095 1184 aa29.44■■■□□ 2.3
ARF3-209ENST00000541967 OSCARQ8IYS5 282 aa29.42■■■□□ 2.3
ARF3-209ENST00000541967 EEA1Q15075 1411 aa29.37■■■□□ 2.29
ARF3-209ENST00000541967 CARMIL1Q5VZK9 1371 aa29.36■■■□□ 2.29
ARF3-209ENST00000541967 CEP170Q5SW79 1584 aa29.32■■■□□ 2.28
ARF3-209ENST00000541967 CLASP1Q7Z460 1538 aa29.32■■■□□ 2.28
ARF3-209ENST00000541967 NUP160Q12769 1436 aa29.29■■■□□ 2.28
ARF3-209ENST00000541967 PRXQ9BXM0 1461 aa29.26■■■□□ 2.27
ARF3-209ENST00000541967 RAPGEF2Q9Y4G8 1499 aa29.25■■■□□ 2.27
ARF3-209ENST00000541967 CSRNP3Q8WYN3 585 aa29.24■■■□□ 2.27
ARF3-209ENST00000541967 FAM9AQ8IZU1 332 aaPredicted RBP29.18■■■□□ 2.26
ARF3-209ENST00000541967 KIF21BO75037 1637 aa29.13■■■□□ 2.25
ARF3-209ENST00000541967 SHROOM2Q13796 1616 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms