RNA–Protein interactions for RNA: ENST00000541938.1

SAMD1-203, Transcript of sterile alpha motif domain containing 1, humanhuman

TSL 3

Gene SAMD1, Length 143 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-203ENST00000541938 NISCHQ9Y2I1 1504 aa47.34■■■■■ 5.17
SAMD1-203ENST00000541938 CCDC180Q9P1Z9 1646 aa42.09■■■■■ 4.33
SAMD1-203ENST00000541938 ABCC9O60706 1549 aa41.58■■■■■ 4.25
SAMD1-203ENST00000541938 DCAF8L2P0C7V8 631 aa39.82■■■■□ 3.97
SAMD1-203ENST00000541938 RB1CC1Q8TDY2 1594 aa39.8■■■■□ 3.96
SAMD1-203ENST00000541938 NACADO15069 1562 aa39.7■■■■□ 3.95
SAMD1-203ENST00000541938 MYO15BQ96JP2 1530 aa39.35■■■■□ 3.89
SAMD1-203ENST00000541938 ZCCHC6Q5VYS8 1495 aaKnown RBP39.35■■■■□ 3.89
SAMD1-203ENST00000541938 DCAF1Q9Y4B6 1507 aa39.1■■■■□ 3.85
SAMD1-203ENST00000541938 PABPN1Q86U42 306 aaKnown RBP eCLIP38.9■■■■□ 3.82
SAMD1-203ENST00000541938 UNC13AQ9UPW8 1703 aa38.83■■■■□ 3.81
SAMD1-203ENST00000541938 BICRAQ9NZM4 1560 aa38.61■■■■□ 3.77
SAMD1-203ENST00000541938 DNAJC5BQ9UF47 199 aa38.59■■■■□ 3.77
SAMD1-203ENST00000541938 SCRIBQ14160 1630 aa38.46■■■■□ 3.75
SAMD1-203ENST00000541938 SHROOM4Q9ULL8 1493 aa38.13■■■■□ 3.69
SAMD1-203ENST00000541938 EIF4G1Q04637 1599 aaKnown RBP37.62■■■■□ 3.61
SAMD1-203ENST00000541938 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
SAMD1-203ENST00000541938 CECR2Q9BXF3 1484 aa37.38■■■■□ 3.57
SAMD1-203ENST00000541938 SMARCA4P51532 1647 aa36.74■■■■□ 3.47
SAMD1-203ENST00000541938 NCAPD3P42695 1498 aa36.69■■■■□ 3.46
SAMD1-203ENST00000541938 BAZ1AQ9NRL2 1556 aaPredicted RBP36.68■■■■□ 3.46
SAMD1-203ENST00000541938 ATAD2BQ9ULI0 1458 aa36.67■■■■□ 3.46
SAMD1-203ENST00000541938 SMARCA2P51531 1590 aa36.56■■■■□ 3.44
SAMD1-203ENST00000541938 MROH2BQ7Z745 1585 aa36.5■■■■□ 3.43
SAMD1-203ENST00000541938 HMGXB3Q12766 1538 aa36.4■■■■□ 3.42
SAMD1-203ENST00000541938 PEG3Q9GZU2 1588 aa36.36■■■■□ 3.41
SAMD1-203ENST00000541938 BAZ1BQ9UIG0 1483 aaKnown RBP36.33■■■■□ 3.41
SAMD1-203ENST00000541938 WIZO95785 1651 aa36.07■■■■□ 3.36
SAMD1-203ENST00000541938 RSF1Q96T23 1441 aaPredicted RBP36.01■■■■□ 3.36
SAMD1-203ENST00000541938 NESP48681 1621 aa35.9■■■■□ 3.34
SAMD1-203ENST00000541938 ERCC6Q03468 1493 aa35.83■■■■□ 3.33
SAMD1-203ENST00000541938 LAMC3Q9Y6N6 1575 aa35.69■■■■□ 3.3
SAMD1-203ENST00000541938 TOP2AP11388 1531 aaKnown RBP35.65■■■■□ 3.3
SAMD1-203ENST00000541938 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
SAMD1-203ENST00000541938 PDS5BQ9NTI5 1447 aa35.53■■■■□ 3.28
SAMD1-203ENST00000541938 CUX2O14529 1486 aa35.51■■■■□ 3.28
SAMD1-203ENST00000541938 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
SAMD1-203ENST00000541938 CFTRP13569 1480 aa35.33■■■■□ 3.25
SAMD1-203ENST00000541938 THOC2Q8NI27 1593 aaKnown RBP35.32■■■■□ 3.24
SAMD1-203ENST00000541938 CCDC88BA6NC98 1476 aa35.29■■■■□ 3.24
SAMD1-203ENST00000541938 DNAJC5Q9H3Z4 198 aa35.22■■■■□ 3.23
SAMD1-203ENST00000541938 FANCD2Q9BXW9 1451 aa35.2■■■■□ 3.23
SAMD1-203ENST00000541938 MRC2Q9UBG0 1479 aa35.16■■■■□ 3.22
SAMD1-203ENST00000541938 CEP164Q9UPV0 1460 aa35.16■■■■□ 3.22
SAMD1-203ENST00000541938 SUPT5HO00267 1087 aaKnown RBP35.02■■■■□ 3.2
SAMD1-203ENST00000541938 WDR62O43379 1518 aa35.01■■■■□ 3.2
SAMD1-203ENST00000541938 PRDM2Q13029 1718 aa34.89■■■■□ 3.18
SAMD1-203ENST00000541938 URB2Q14146 1524 aaKnown RBP34.86■■■■□ 3.17
SAMD1-203ENST00000541938 TOPBP1Q92547 1522 aa34.6■■■■□ 3.13
SAMD1-203ENST00000541938 ABCC8Q09428 1581 aa34.56■■■■□ 3.12
SAMD1-203ENST00000541938 DNMBPQ6XZF7 1577 aa34.49■■■■□ 3.11
SAMD1-203ENST00000541938 IFT140Q96RY7 1462 aa34.44■■■■□ 3.1
SAMD1-203ENST00000541938 ZNF608Q9ULD9 1512 aaPredicted RBP34.33■■■■□ 3.09
SAMD1-203ENST00000541938 POLA1P09884 1462 aaPredicted RBP34.28■■■■□ 3.08
SAMD1-203ENST00000541938 CUX1P39880 1505 aa34.24■■■■□ 3.07
SAMD1-203ENST00000541938 TARBP1Q13395 1621 aaKnown RBP34.19■■■■□ 3.06
SAMD1-203ENST00000541938 SOGA1O94964 1423 aa34.19■■■■□ 3.06
SAMD1-203ENST00000541938 RAD54L2Q9Y4B4 1467 aa34.19■■■■□ 3.06
SAMD1-203ENST00000541938 FGD5Q6ZNL6 1462 aa34.17■■■■□ 3.06
SAMD1-203ENST00000541938 AQRO60306 1485 aaKnown RBP eCLIP34.14■■■■□ 3.06
SAMD1-203ENST00000541938 OSCARQ8IYS5 282 aa34.1■■■■□ 3.05
SAMD1-203ENST00000541938 EIF4G3O43432 1585 aaKnown RBP34.1■■■■□ 3.05
SAMD1-203ENST00000541938 TDRD9Q8NDG6 1382 aaKnown RBP34.05■■■■□ 3.04
SAMD1-203ENST00000541938 WRNQ14191 1432 aaPredicted RBP eCLIP33.95■■■■□ 3.02
SAMD1-203ENST00000541938 WDR97A6NE52 1622 aa33.86■■■■□ 3.01
SAMD1-203ENST00000541938 TOP2BQ02880 1626 aa33.84■■■■□ 3.01
SAMD1-203ENST00000541938 FBLN2P98095 1184 aa33.84■■■■□ 3.01
SAMD1-203ENST00000541938 SYNJ1O43426 1573 aa33.84■■■■□ 3.01
SAMD1-203ENST00000541938 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3
SAMD1-203ENST00000541938 ABCA10Q8WWZ4 1543 aa33.81■■■■□ 3
SAMD1-203ENST00000541938 GRIN2BQ13224 1484 aa33.78■■■■□ 3
SAMD1-203ENST00000541938 SNAPC4Q5SXM2 1469 aa33.76■■■■□ 3
SAMD1-203ENST00000541938 TRIM41Q8WV44 630 aa33.76■■■□□ 2.99
SAMD1-203ENST00000541938 GAPVD1Q14C86 1478 aa33.76■■■□□ 2.99
SAMD1-203ENST00000541938 CHD1O14646 1710 aa33.71■■■□□ 2.99
SAMD1-203ENST00000541938 CHMP7Q8WUX9 453 aaPredicted RBP33.68■■■□□ 2.98
SAMD1-203ENST00000541938 MAGI1Q96QZ7 1491 aaPredicted RBP33.68■■■□□ 2.98
SAMD1-203ENST00000541938 ABCA5Q8WWZ7 1642 aa33.65■■■□□ 2.98
SAMD1-203ENST00000541938 PBRM1Q86U86 1689 aa33.6■■■□□ 2.97
SAMD1-203ENST00000541938 SYNJ2O15056 1496 aa33.57■■■□□ 2.97
SAMD1-203ENST00000541938 RIMBP3CA6NJZ7 1639 aa33.47■■■□□ 2.95
SAMD1-203ENST00000541938 RIMBP3BA6NNM3 1639 aa33.47■■■□□ 2.95
SAMD1-203ENST00000541938 RIMBP3Q9UFD9 1639 aa33.47■■■□□ 2.95
SAMD1-203ENST00000541938 ARHGEF11O15085 1522 aa33.46■■■□□ 2.95
SAMD1-203ENST00000541938 ERICH3Q5RHP9 1530 aa33.38■■■□□ 2.93
SAMD1-203ENST00000541938 CLASP1Q7Z460 1538 aa33.37■■■□□ 2.93
SAMD1-203ENST00000541938 FHAD1B1AJZ9 1412 aa33.36■■■□□ 2.93
SAMD1-203ENST00000541938 ADAMTS12P58397 1594 aa33.36■■■□□ 2.93
SAMD1-203ENST00000541938 GRIN2AQ12879 1464 aa33.33■■■□□ 2.93
SAMD1-203ENST00000541938 CYB5RLQ6IPT4 315 aa33.28■■■□□ 2.92
SAMD1-203ENST00000541938 KIF27Q86VH2 1401 aa33.27■■■□□ 2.92
SAMD1-203ENST00000541938 IGF1RP08069 1367 aa33.21■■■□□ 2.91
SAMD1-203ENST00000541938 NUP160Q12769 1436 aa33.19■■■□□ 2.9
SAMD1-203ENST00000541938 ARAP1Q96P48 1450 aa33.18■■■□□ 2.9
SAMD1-203ENST00000541938 CEP170Q5SW79 1584 aa33.16■■■□□ 2.9
SAMD1-203ENST00000541938 CARMIL1Q5VZK9 1371 aa32.99■■■□□ 2.87
SAMD1-203ENST00000541938 CUL7Q14999 1698 aa32.99■■■□□ 2.87
SAMD1-203ENST00000541938 JPH4Q96JJ6 628 aa32.95■■■□□ 2.87
SAMD1-203ENST00000541938 ERCC6L2Q5T890 1561 aa32.94■■■□□ 2.86
SAMD1-203ENST00000541938 RUSC2Q8N2Y8 1516 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms