RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
LRTOMT-219ENST00000541899 CCDC180Q9P1Z9 1646 aa32.57■■■□□ 2.8
LRTOMT-219ENST00000541899 ABCC9O60706 1549 aa31.23■■■□□ 2.59
LRTOMT-219ENST00000541899 ZCCHC6Q5VYS8 1495 aaKnown RBP30.81■■■□□ 2.52
LRTOMT-219ENST00000541899 DCAF1Q9Y4B6 1507 aa30.59■■■□□ 2.49
LRTOMT-219ENST00000541899 MYO15BQ96JP2 1530 aa30.54■■■□□ 2.48
LRTOMT-219ENST00000541899 NACADO15069 1562 aa30.49■■■□□ 2.47
LRTOMT-219ENST00000541899 DCAF8L2P0C7V8 631 aa30.44■■■□□ 2.46
LRTOMT-219ENST00000541899 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
LRTOMT-219ENST00000541899 UNC13AQ9UPW8 1703 aa29.69■■■□□ 2.34
LRTOMT-219ENST00000541899 SCRIBQ14160 1630 aa29.65■■■□□ 2.34
LRTOMT-219ENST00000541899 BICRAQ9NZM4 1560 aa29.43■■■□□ 2.3
LRTOMT-219ENST00000541899 SHROOM4Q9ULL8 1493 aa29.29■■■□□ 2.28
LRTOMT-219ENST00000541899 PABPN1Q86U42 306 aaKnown RBP eCLIP29.25■■■□□ 2.27
LRTOMT-219ENST00000541899 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
LRTOMT-219ENST00000541899 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
LRTOMT-219ENST00000541899 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
LRTOMT-219ENST00000541899 SMARCA4P51532 1647 aa28.47■■■□□ 2.15
LRTOMT-219ENST00000541899 MROH2BQ7Z745 1585 aa28.37■■■□□ 2.13
LRTOMT-219ENST00000541899 CC2D2AQ9P2K1 1620 aa28.32■■■□□ 2.12
LRTOMT-219ENST00000541899 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.12
LRTOMT-219ENST00000541899 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
LRTOMT-219ENST00000541899 SMARCA2P51531 1590 aa28.2■■■□□ 2.1
LRTOMT-219ENST00000541899 DNAJC5BQ9UF47 199 aa28.19■■■□□ 2.1
LRTOMT-219ENST00000541899 ATAD2BQ9ULI0 1458 aa28.18■■■□□ 2.1
LRTOMT-219ENST00000541899 NCAPD3P42695 1498 aa28.12■■■□□ 2.09
LRTOMT-219ENST00000541899 WIZO95785 1651 aa28.1■■■□□ 2.09
LRTOMT-219ENST00000541899 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
LRTOMT-219ENST00000541899 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
LRTOMT-219ENST00000541899 TOP2AP11388 1531 aaKnown RBP27.86■■■□□ 2.05
LRTOMT-219ENST00000541899 SUPT5HO00267 1087 aaKnown RBP27.85■■■□□ 2.05
LRTOMT-219ENST00000541899 CCDC88BA6NC98 1476 aa27.51■■■□□ 2
LRTOMT-219ENST00000541899 CADPSQ9ULU8 1353 aa27.31■■□□□ 1.96
LRTOMT-219ENST00000541899 LAMC3Q9Y6N6 1575 aa27.3■■□□□ 1.96
LRTOMT-219ENST00000541899 CFTRP13569 1480 aa27.26■■□□□ 1.95
LRTOMT-219ENST00000541899 NESP48681 1621 aa27.19■■□□□ 1.94
LRTOMT-219ENST00000541899 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
LRTOMT-219ENST00000541899 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
LRTOMT-219ENST00000541899 FANCD2Q9BXW9 1451 aa26.96■■□□□ 1.91
LRTOMT-219ENST00000541899 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
LRTOMT-219ENST00000541899 ERCC6Q03468 1493 aa26.88■■□□□ 1.89
LRTOMT-219ENST00000541899 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
LRTOMT-219ENST00000541899 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
LRTOMT-219ENST00000541899 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
LRTOMT-219ENST00000541899 ABCC8Q09428 1581 aa26.7■■□□□ 1.86
LRTOMT-219ENST00000541899 URB2Q14146 1524 aaKnown RBP26.66■■□□□ 1.86
LRTOMT-219ENST00000541899 WDR62O43379 1518 aa26.65■■□□□ 1.86
LRTOMT-219ENST00000541899 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
LRTOMT-219ENST00000541899 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
LRTOMT-219ENST00000541899 CUX1P39880 1505 aa26.6■■□□□ 1.85
LRTOMT-219ENST00000541899 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
LRTOMT-219ENST00000541899 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
LRTOMT-219ENST00000541899 BIVM-ERCC5R4GMW8 1640 aa26.54■■□□□ 1.84
LRTOMT-219ENST00000541899 SYNJ1O43426 1573 aa26.52■■□□□ 1.84
LRTOMT-219ENST00000541899 CUX2O14529 1486 aa26.49■■□□□ 1.83
LRTOMT-219ENST00000541899 POLA1P09884 1462 aaPredicted RBP26.41■■□□□ 1.82
LRTOMT-219ENST00000541899 FGD5Q6ZNL6 1462 aa26.41■■□□□ 1.82
LRTOMT-219ENST00000541899 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
LRTOMT-219ENST00000541899 TRIM41Q8WV44 630 aa26.33■■□□□ 1.81
LRTOMT-219ENST00000541899 IFT140Q96RY7 1462 aa26.32■■□□□ 1.8
LRTOMT-219ENST00000541899 SOGA1O94964 1423 aa26.31■■□□□ 1.8
LRTOMT-219ENST00000541899 TARBP1Q13395 1621 aaKnown RBP26.29■■□□□ 1.8
LRTOMT-219ENST00000541899 RAD54L2Q9Y4B4 1467 aa26.25■■□□□ 1.79
LRTOMT-219ENST00000541899 ABCA10Q8WWZ4 1543 aa26.22■■□□□ 1.79
LRTOMT-219ENST00000541899 WDR97A6NE52 1622 aa26.21■■□□□ 1.79
LRTOMT-219ENST00000541899 ZNF608Q9ULD9 1512 aaPredicted RBP26.1■■□□□ 1.77
LRTOMT-219ENST00000541899 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
LRTOMT-219ENST00000541899 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
LRTOMT-219ENST00000541899 EIF4G3O43432 1585 aaKnown RBP26.04■■□□□ 1.76
LRTOMT-219ENST00000541899 KIF27Q86VH2 1401 aa26.04■■□□□ 1.76
LRTOMT-219ENST00000541899 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.76
LRTOMT-219ENST00000541899 GAPVD1Q14C86 1478 aa26.02■■□□□ 1.76
LRTOMT-219ENST00000541899 GRIN2BQ13224 1484 aa25.95■■□□□ 1.74
LRTOMT-219ENST00000541899 PBRM1Q86U86 1689 aa25.94■■□□□ 1.74
LRTOMT-219ENST00000541899 EEA1Q15075 1411 aa25.94■■□□□ 1.74
LRTOMT-219ENST00000541899 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
LRTOMT-219ENST00000541899 RUSC2Q8N2Y8 1516 aa25.92■■□□□ 1.74
LRTOMT-219ENST00000541899 IGF1RP08069 1367 aa25.87■■□□□ 1.73
LRTOMT-219ENST00000541899 MAGI1Q96QZ7 1491 aaPredicted RBP25.85■■□□□ 1.73
LRTOMT-219ENST00000541899 SNAPC4Q5SXM2 1469 aa25.8■■□□□ 1.72
LRTOMT-219ENST00000541899 CUL7Q14999 1698 aa25.8■■□□□ 1.72
LRTOMT-219ENST00000541899 CSRNP3Q8WYN3 585 aa25.78■■□□□ 1.72
LRTOMT-219ENST00000541899 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
LRTOMT-219ENST00000541899 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
LRTOMT-219ENST00000541899 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
LRTOMT-219ENST00000541899 SYNJ2O15056 1496 aa25.72■■□□□ 1.71
LRTOMT-219ENST00000541899 PRXQ9BXM0 1461 aa25.69■■□□□ 1.7
LRTOMT-219ENST00000541899 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
LRTOMT-219ENST00000541899 CHMP7Q8WUX9 453 aaPredicted RBP25.64■■□□□ 1.7
LRTOMT-219ENST00000541899 RAPGEF2Q9Y4G8 1499 aa25.64■■□□□ 1.69
LRTOMT-219ENST00000541899 CHD1O14646 1710 aa25.63■■□□□ 1.69
LRTOMT-219ENST00000541899 GRIN2AQ12879 1464 aa25.61■■□□□ 1.69
LRTOMT-219ENST00000541899 KIF21BO75037 1637 aa25.61■■□□□ 1.69
LRTOMT-219ENST00000541899 FBLN2P98095 1184 aa25.56■■□□□ 1.68
LRTOMT-219ENST00000541899 NUP160Q12769 1436 aa25.49■■□□□ 1.67
LRTOMT-219ENST00000541899 GOLGA3Q08378 1498 aa25.47■■□□□ 1.67
LRTOMT-219ENST00000541899 OSCARQ8IYS5 282 aa25.46■■□□□ 1.67
LRTOMT-219ENST00000541899 CEP170Q5SW79 1584 aa25.45■■□□□ 1.66
LRTOMT-219ENST00000541899 KIAA0586Q9BVV6 1533 aa25.39■■□□□ 1.66
LRTOMT-219ENST00000541899 CLASP1Q7Z460 1538 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms