RNA–Protein interactions for RNA: ENST00000541647.1

C1S-218, Transcript of complement C1s, humanhuman

TSL 4

Gene C1S, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-218ENST00000541647 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
C1S-218ENST00000541647 CCDC180Q9P1Z9 1646 aa23.98■■□□□ 1.43
C1S-218ENST00000541647 ABCC9O60706 1549 aa23.84■■□□□ 1.41
C1S-218ENST00000541647 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
C1S-218ENST00000541647 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
C1S-218ENST00000541647 NACADO15069 1562 aa22.67■■□□□ 1.22
C1S-218ENST00000541647 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
C1S-218ENST00000541647 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
C1S-218ENST00000541647 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
C1S-218ENST00000541647 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
C1S-218ENST00000541647 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
C1S-218ENST00000541647 DNAJC5BQ9UF47 199 aa22.13■■□□□ 1.13
C1S-218ENST00000541647 BICRAQ9NZM4 1560 aa22.01■■□□□ 1.11
C1S-218ENST00000541647 SCRIBQ14160 1630 aa21.89■■□□□ 1.09
C1S-218ENST00000541647 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
C1S-218ENST00000541647 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
C1S-218ENST00000541647 EIF4G1Q04637 1599 aaKnown RBP21.51■■□□□ 1.03
C1S-218ENST00000541647 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
C1S-218ENST00000541647 NCAPD3P42695 1498 aa20.91■□□□□ 0.94
C1S-218ENST00000541647 SMARCA4P51532 1647 aa20.89■□□□□ 0.93
C1S-218ENST00000541647 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
C1S-218ENST00000541647 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
C1S-218ENST00000541647 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
C1S-218ENST00000541647 HMGXB3Q12766 1538 aa20.76■□□□□ 0.91
C1S-218ENST00000541647 BAZ1BQ9UIG0 1483 aaKnown RBP20.72■□□□□ 0.91
C1S-218ENST00000541647 MROH2BQ7Z745 1585 aa20.67■□□□□ 0.9
C1S-218ENST00000541647 PEG3Q9GZU2 1588 aa20.65■□□□□ 0.9
C1S-218ENST00000541647 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
C1S-218ENST00000541647 NESP48681 1621 aa20.49■□□□□ 0.87
C1S-218ENST00000541647 CUX2O14529 1486 aa20.47■□□□□ 0.87
C1S-218ENST00000541647 WIZO95785 1651 aa20.43■□□□□ 0.86
C1S-218ENST00000541647 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
C1S-218ENST00000541647 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
C1S-218ENST00000541647 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
C1S-218ENST00000541647 CADPSQ9ULU8 1353 aa20.33■□□□□ 0.84
C1S-218ENST00000541647 DNAJC5Q9H3Z4 198 aa20.25■□□□□ 0.83
C1S-218ENST00000541647 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
C1S-218ENST00000541647 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
C1S-218ENST00000541647 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
C1S-218ENST00000541647 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
C1S-218ENST00000541647 CFTRP13569 1480 aa20.1■□□□□ 0.81
C1S-218ENST00000541647 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
C1S-218ENST00000541647 FANCD2Q9BXW9 1451 aa20.08■□□□□ 0.81
C1S-218ENST00000541647 WDR62O43379 1518 aa20.02■□□□□ 0.79
C1S-218ENST00000541647 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
C1S-218ENST00000541647 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
C1S-218ENST00000541647 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
C1S-218ENST00000541647 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
C1S-218ENST00000541647 SUPT5HO00267 1087 aaKnown RBP19.72■□□□□ 0.75
C1S-218ENST00000541647 TOPBP1Q92547 1522 aa19.7■□□□□ 0.74
C1S-218ENST00000541647 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
C1S-218ENST00000541647 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
C1S-218ENST00000541647 DNMBPQ6XZF7 1577 aa19.65■□□□□ 0.74
C1S-218ENST00000541647 ZNF608Q9ULD9 1512 aaPredicted RBP19.58■□□□□ 0.73
C1S-218ENST00000541647 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
C1S-218ENST00000541647 POLA1P09884 1462 aaPredicted RBP19.51■□□□□ 0.71
C1S-218ENST00000541647 SOGA1O94964 1423 aa19.48■□□□□ 0.71
C1S-218ENST00000541647 EIF4G3O43432 1585 aaKnown RBP19.48■□□□□ 0.71
C1S-218ENST00000541647 AQRO60306 1485 aaKnown RBP eCLIP19.47■□□□□ 0.71
C1S-218ENST00000541647 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
C1S-218ENST00000541647 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
C1S-218ENST00000541647 FBLN2P98095 1184 aa19.43■□□□□ 0.7
C1S-218ENST00000541647 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
C1S-218ENST00000541647 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
C1S-218ENST00000541647 CUX1P39880 1505 aa19.41■□□□□ 0.7
C1S-218ENST00000541647 WDR97A6NE52 1622 aa19.33■□□□□ 0.69
C1S-218ENST00000541647 AEBP2Q6ZN18 517 aaPredicted RBP19.31■□□□□ 0.68
C1S-218ENST00000541647 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
C1S-218ENST00000541647 CHD1O14646 1710 aa19.29■□□□□ 0.68
C1S-218ENST00000541647 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
C1S-218ENST00000541647 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.67
C1S-218ENST00000541647 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
C1S-218ENST00000541647 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
C1S-218ENST00000541647 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
C1S-218ENST00000541647 MAGI1Q96QZ7 1491 aaPredicted RBP19.24■□□□□ 0.67
C1S-218ENST00000541647 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
C1S-218ENST00000541647 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
C1S-218ENST00000541647 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
C1S-218ENST00000541647 ABCA10Q8WWZ4 1543 aa19.21■□□□□ 0.67
C1S-218ENST00000541647 CYB5RLQ6IPT4 315 aa19.18■□□□□ 0.66
C1S-218ENST00000541647 SYNJ2O15056 1496 aa19.17■□□□□ 0.66
C1S-218ENST00000541647 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
C1S-218ENST00000541647 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
C1S-218ENST00000541647 PBRM1Q86U86 1689 aa19.15■□□□□ 0.66
C1S-218ENST00000541647 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.66
C1S-218ENST00000541647 ABCA5Q8WWZ7 1642 aa19.12■□□□□ 0.65
C1S-218ENST00000541647 CLASP1Q7Z460 1538 aa19.06■□□□□ 0.64
C1S-218ENST00000541647 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
C1S-218ENST00000541647 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
C1S-218ENST00000541647 GRIN2AQ12879 1464 aa19■□□□□ 0.63
C1S-218ENST00000541647 ERICH3Q5RHP9 1530 aa18.99■□□□□ 0.63
C1S-218ENST00000541647 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
C1S-218ENST00000541647 TRHP20396 242 aaPredicted RBP18.96■□□□□ 0.63
C1S-218ENST00000541647 NUP160Q12769 1436 aa18.91■□□□□ 0.62
C1S-218ENST00000541647 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
C1S-218ENST00000541647 CEP170Q5SW79 1584 aa18.88■□□□□ 0.61
C1S-218ENST00000541647 IGF1RP08069 1367 aa18.81■□□□□ 0.6
C1S-218ENST00000541647 JPH4Q96JJ6 628 aa18.8■□□□□ 0.6
C1S-218ENST00000541647 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.6
C1S-218ENST00000541647 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms