RNA–Protein interactions for RNA: ENST00000541537.5

DDX47-206, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 1,517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-206ENST00000541537 NISCHQ9Y2I1 1504 aa24.65■■□□□ 1.54
DDX47-206ENST00000541537 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
DDX47-206ENST00000541537 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
DDX47-206ENST00000541537 CCDC180Q9P1Z9 1646 aa21.78■■□□□ 1.08
DDX47-206ENST00000541537 ABCC9O60706 1549 aa20.95■□□□□ 0.94
DDX47-206ENST00000541537 ZCCHC6Q5VYS8 1495 aaKnown RBP20.62■□□□□ 0.89
DDX47-206ENST00000541537 DCAF1Q9Y4B6 1507 aa20.41■□□□□ 0.86
DDX47-206ENST00000541537 DCAF8L2P0C7V8 631 aa20.39■□□□□ 0.85
DDX47-206ENST00000541537 NACADO15069 1562 aa20.37■□□□□ 0.85
DDX47-206ENST00000541537 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
DDX47-206ENST00000541537 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
DDX47-206ENST00000541537 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
DDX47-206ENST00000541537 UNC13AQ9UPW8 1703 aa19.89■□□□□ 0.77
DDX47-206ENST00000541537 PHF23Q9BUL5 403 aaPredicted RBP19.71■□□□□ 0.75
DDX47-206ENST00000541537 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
DDX47-206ENST00000541537 SHROOM4Q9ULL8 1493 aa19.66■□□□□ 0.74
DDX47-206ENST00000541537 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.73
DDX47-206ENST00000541537 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
DDX47-206ENST00000541537 CECR2Q9BXF3 1484 aa19.16■□□□□ 0.66
DDX47-206ENST00000541537 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
DDX47-206ENST00000541537 BAZ1AQ9NRL2 1556 aaPredicted RBP19.08■□□□□ 0.64
DDX47-206ENST00000541537 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
DDX47-206ENST00000541537 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
DDX47-206ENST00000541537 CC2D2AQ9P2K1 1620 aa18.98■□□□□ 0.63
DDX47-206ENST00000541537 RSF1Q96T23 1441 aaPredicted RBP18.9■□□□□ 0.62
DDX47-206ENST00000541537 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
DDX47-206ENST00000541537 PEG3Q9GZU2 1588 aa18.88■□□□□ 0.61
DDX47-206ENST00000541537 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
DDX47-206ENST00000541537 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
DDX47-206ENST00000541537 WIZO95785 1651 aa18.83■□□□□ 0.6
DDX47-206ENST00000541537 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
DDX47-206ENST00000541537 HMGXB3Q12766 1538 aa18.75■□□□□ 0.59
DDX47-206ENST00000541537 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
DDX47-206ENST00000541537 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
DDX47-206ENST00000541537 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.57
DDX47-206ENST00000541537 CCDC88BA6NC98 1476 aa18.41■□□□□ 0.54
DDX47-206ENST00000541537 CADPSQ9ULU8 1353 aa18.25■□□□□ 0.51
DDX47-206ENST00000541537 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
DDX47-206ENST00000541537 NESP48681 1621 aa18.24■□□□□ 0.51
DDX47-206ENST00000541537 CFTRP13569 1480 aa18.23■□□□□ 0.51
DDX47-206ENST00000541537 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
DDX47-206ENST00000541537 PRDM2Q13029 1718 aa18.16■□□□□ 0.5
DDX47-206ENST00000541537 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
DDX47-206ENST00000541537 KIF21AQ7Z4S6 1674 aa18.05■□□□□ 0.48
DDX47-206ENST00000541537 FANCD2Q9BXW9 1451 aa18.05■□□□□ 0.48
DDX47-206ENST00000541537 FOXD1Q16676 465 aa18.05■□□□□ 0.48
DDX47-206ENST00000541537 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
DDX47-206ENST00000541537 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
DDX47-206ENST00000541537 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
DDX47-206ENST00000541537 MRC2Q9UBG0 1479 aa17.9■□□□□ 0.46
DDX47-206ENST00000541537 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
DDX47-206ENST00000541537 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
DDX47-206ENST00000541537 WDR62O43379 1518 aa17.85■□□□□ 0.45
DDX47-206ENST00000541537 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.44
DDX47-206ENST00000541537 CUX1P39880 1505 aa17.82■□□□□ 0.44
DDX47-206ENST00000541537 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
DDX47-206ENST00000541537 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
DDX47-206ENST00000541537 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
DDX47-206ENST00000541537 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
DDX47-206ENST00000541537 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
DDX47-206ENST00000541537 CUX2O14529 1486 aa17.71■□□□□ 0.43
DDX47-206ENST00000541537 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
DDX47-206ENST00000541537 POLA1P09884 1462 aaPredicted RBP17.68■□□□□ 0.42
DDX47-206ENST00000541537 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
DDX47-206ENST00000541537 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
DDX47-206ENST00000541537 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
DDX47-206ENST00000541537 RAD54L2Q9Y4B4 1467 aa17.59■□□□□ 0.41
DDX47-206ENST00000541537 SOGA1O94964 1423 aa17.59■□□□□ 0.41
DDX47-206ENST00000541537 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
DDX47-206ENST00000541537 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
DDX47-206ENST00000541537 ZNF608Q9ULD9 1512 aaPredicted RBP17.5■□□□□ 0.39
DDX47-206ENST00000541537 EIF4G3O43432 1585 aaKnown RBP17.48■□□□□ 0.39
DDX47-206ENST00000541537 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
DDX47-206ENST00000541537 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.38
DDX47-206ENST00000541537 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.384e-6■■■■□ 20.6
DDX47-206ENST00000541537 GAPVD1Q14C86 1478 aa17.41■□□□□ 0.38
DDX47-206ENST00000541537 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
DDX47-206ENST00000541537 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
DDX47-206ENST00000541537 PBRM1Q86U86 1689 aa17.38■□□□□ 0.37
DDX47-206ENST00000541537 ADRA2BP18089 450 aa17.37■□□□□ 0.37
DDX47-206ENST00000541537 RUSC2Q8N2Y8 1516 aa17.36■□□□□ 0.37
DDX47-206ENST00000541537 GRIN2BQ13224 1484 aa17.36■□□□□ 0.37
DDX47-206ENST00000541537 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
DDX47-206ENST00000541537 EEA1Q15075 1411 aa17.3■□□□□ 0.36
DDX47-206ENST00000541537 SNAPC4Q5SXM2 1469 aa17.29■□□□□ 0.36
DDX47-206ENST00000541537 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
DDX47-206ENST00000541537 IGF1RP08069 1367 aa17.28■□□□□ 0.36
DDX47-206ENST00000541537 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
DDX47-206ENST00000541537 CUL7Q14999 1698 aa17.25■□□□□ 0.35
DDX47-206ENST00000541537 FAM9AQ8IZU1 332 aaPredicted RBP17.22■□□□□ 0.35
DDX47-206ENST00000541537 FHAD1B1AJZ9 1412 aa17.22■□□□□ 0.35
DDX47-206ENST00000541537 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
DDX47-206ENST00000541537 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.34
DDX47-206ENST00000541537 CARMIL1Q5VZK9 1371 aa17.19■□□□□ 0.34
DDX47-206ENST00000541537 CHD1O14646 1710 aa17.19■□□□□ 0.34
DDX47-206ENST00000541537 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
DDX47-206ENST00000541537 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
DDX47-206ENST00000541537 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
DDX47-206ENST00000541537 RAPGEF2Q9Y4G8 1499 aa17.14■□□□□ 0.33
DDX47-206ENST00000541537 FBLN2P98095 1184 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms