RNA–Protein interactions for RNA: ENST00000541234.1

NTF3-204, Transcript of neurotrophin 3, humanhuman

TSL 3

Gene NTF3, Length 440 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3-204ENST00000541234 NISCHQ9Y2I1 1504 aa35.37■■■■□ 3.25
NTF3-204ENST00000541234 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
NTF3-204ENST00000541234 ABCC9O60706 1549 aa30.92■■■□□ 2.54
NTF3-204ENST00000541234 ZCCHC6Q5VYS8 1495 aaKnown RBP29.62■■■□□ 2.33
NTF3-204ENST00000541234 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
NTF3-204ENST00000541234 DCAF8L2P0C7V8 631 aa29.31■■■□□ 2.28
NTF3-204ENST00000541234 DCAF1Q9Y4B6 1507 aa29.24■■■□□ 2.27
NTF3-204ENST00000541234 NACADO15069 1562 aa29.22■■■□□ 2.27
NTF3-204ENST00000541234 MYO15BQ96JP2 1530 aa29.05■■■□□ 2.24
NTF3-204ENST00000541234 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
NTF3-204ENST00000541234 UNC13AQ9UPW8 1703 aa28.87■■■□□ 2.21
NTF3-204ENST00000541234 PABPN1Q86U42 306 aaKnown RBP eCLIP28.75■■■□□ 2.19
NTF3-204ENST00000541234 BICRAQ9NZM4 1560 aa28.6■■■□□ 2.17
NTF3-204ENST00000541234 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
NTF3-204ENST00000541234 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.15
NTF3-204ENST00000541234 CC2D2AQ9P2K1 1620 aa27.96■■■□□ 2.07
NTF3-204ENST00000541234 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.05
NTF3-204ENST00000541234 CECR2Q9BXF3 1484 aa27.85■■■□□ 2.05
NTF3-204ENST00000541234 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
NTF3-204ENST00000541234 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
NTF3-204ENST00000541234 MROH2BQ7Z745 1585 aa27.31■■□□□ 1.96
NTF3-204ENST00000541234 RSF1Q96T23 1441 aaPredicted RBP27.22■■□□□ 1.95
NTF3-204ENST00000541234 SUPT5HO00267 1087 aaKnown RBP27.17■■□□□ 1.94
NTF3-204ENST00000541234 WIZO95785 1651 aa27.09■■□□□ 1.93
NTF3-204ENST00000541234 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
NTF3-204ENST00000541234 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
NTF3-204ENST00000541234 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
NTF3-204ENST00000541234 ATAD2BQ9ULI0 1458 aa26.93■■□□□ 1.9
NTF3-204ENST00000541234 TOP2AP11388 1531 aaKnown RBP26.8■■□□□ 1.88
NTF3-204ENST00000541234 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
NTF3-204ENST00000541234 HMGXB3Q12766 1538 aa26.78■■□□□ 1.88
NTF3-204ENST00000541234 ERCC6Q03468 1493 aa26.69■■□□□ 1.86
NTF3-204ENST00000541234 CUX2O14529 1486 aa26.64■■□□□ 1.86
NTF3-204ENST00000541234 DNAJC5Q9H3Z4 198 aa26.61■■□□□ 1.85
NTF3-204ENST00000541234 NESP48681 1621 aa26.57■■□□□ 1.84
NTF3-204ENST00000541234 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
NTF3-204ENST00000541234 LAMC3Q9Y6N6 1575 aa26.38■■□□□ 1.81
NTF3-204ENST00000541234 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.81
NTF3-204ENST00000541234 KIF21AQ7Z4S6 1674 aa26.29■■□□□ 1.8
NTF3-204ENST00000541234 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
NTF3-204ENST00000541234 CADPSQ9ULU8 1353 aa26.15■■□□□ 1.78
NTF3-204ENST00000541234 CFTRP13569 1480 aa26.05■■□□□ 1.76
NTF3-204ENST00000541234 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
NTF3-204ENST00000541234 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
NTF3-204ENST00000541234 WDR62O43379 1518 aa25.94■■□□□ 1.74
NTF3-204ENST00000541234 CEP164Q9UPV0 1460 aa25.89■■□□□ 1.73
NTF3-204ENST00000541234 FANCD2Q9BXW9 1451 aa25.87■■□□□ 1.73
NTF3-204ENST00000541234 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
NTF3-204ENST00000541234 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
NTF3-204ENST00000541234 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
NTF3-204ENST00000541234 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
NTF3-204ENST00000541234 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
NTF3-204ENST00000541234 CUX1P39880 1505 aa25.58■■□□□ 1.68
NTF3-204ENST00000541234 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
NTF3-204ENST00000541234 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
NTF3-204ENST00000541234 TOP2BQ02880 1626 aa25.54■■□□□ 1.68
NTF3-204ENST00000541234 DNMBPQ6XZF7 1577 aa25.51■■□□□ 1.67
NTF3-204ENST00000541234 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
NTF3-204ENST00000541234 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
NTF3-204ENST00000541234 FGD5Q6ZNL6 1462 aa25.37■■□□□ 1.65
NTF3-204ENST00000541234 IFT140Q96RY7 1462 aa25.35■■□□□ 1.65
NTF3-204ENST00000541234 ZNF608Q9ULD9 1512 aaPredicted RBP25.33■■□□□ 1.65
NTF3-204ENST00000541234 POLA1P09884 1462 aaPredicted RBP25.3■■□□□ 1.64
NTF3-204ENST00000541234 EIF4G3O43432 1585 aaKnown RBP25.23■■□□□ 1.63
NTF3-204ENST00000541234 RAD54L2Q9Y4B4 1467 aa25.21■■□□□ 1.63
NTF3-204ENST00000541234 SOGA1O94964 1423 aa25.2■■□□□ 1.62
NTF3-204ENST00000541234 TARBP1Q13395 1621 aaKnown RBP25.18■■□□□ 1.62
NTF3-204ENST00000541234 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
NTF3-204ENST00000541234 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
NTF3-204ENST00000541234 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
NTF3-204ENST00000541234 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
NTF3-204ENST00000541234 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
NTF3-204ENST00000541234 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
NTF3-204ENST00000541234 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
NTF3-204ENST00000541234 CHD1O14646 1710 aa25.09■■□□□ 1.61
NTF3-204ENST00000541234 AQRO60306 1485 aaKnown RBP eCLIP25.09■■□□□ 1.61
NTF3-204ENST00000541234 KIF27Q86VH2 1401 aa25.05■■□□□ 1.6
NTF3-204ENST00000541234 EEA1Q15075 1411 aa25.04■■□□□ 1.6
NTF3-204ENST00000541234 ARHGEF11O15085 1522 aa25.04■■□□□ 1.6
NTF3-204ENST00000541234 TDRD9Q8NDG6 1382 aaKnown RBP25■■□□□ 1.59
NTF3-204ENST00000541234 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
NTF3-204ENST00000541234 FBLN2P98095 1184 aa24.95■■□□□ 1.58
NTF3-204ENST00000541234 GAPVD1Q14C86 1478 aa24.93■■□□□ 1.58
NTF3-204ENST00000541234 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
NTF3-204ENST00000541234 PBRM1Q86U86 1689 aa24.91■■□□□ 1.58
NTF3-204ENST00000541234 SNAPC4Q5SXM2 1469 aa24.87■■□□□ 1.57
NTF3-204ENST00000541234 IGF1RP08069 1367 aa24.83■■□□□ 1.57
NTF3-204ENST00000541234 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
NTF3-204ENST00000541234 GRIN2BQ13224 1484 aa24.82■■□□□ 1.56
NTF3-204ENST00000541234 CYB5RLQ6IPT4 315 aa24.8■■□□□ 1.56
NTF3-204ENST00000541234 KIF21BO75037 1637 aa24.79■■□□□ 1.56
NTF3-204ENST00000541234 CUL7Q14999 1698 aa24.79■■□□□ 1.56
NTF3-204ENST00000541234 ARAP1Q96P48 1450 aa24.78■■□□□ 1.56
NTF3-204ENST00000541234 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
NTF3-204ENST00000541234 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
NTF3-204ENST00000541234 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
NTF3-204ENST00000541234 PRXQ9BXM0 1461 aa24.75■■□□□ 1.55
NTF3-204ENST00000541234 LOC105371045A0A1W2PR82 267 aa24.74■■□□□ 1.55
NTF3-204ENST00000541234 CLASP1Q7Z460 1538 aa24.74■■□□□ 1.55
NTF3-204ENST00000541234 CARMIL1Q5VZK9 1371 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 205.1 ms