RNA–Protein interactions for RNA: ENST00000541017.5

PPFIA2-204, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 4,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-204ENST00000541017 NISCHQ9Y2I1 1504 aa18.56■□□□□ 0.56
PPFIA2-204ENST00000541017 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
PPFIA2-204ENST00000541017 DCAF8L2P0C7V8 631 aa15.85■□□□□ 0.13
PPFIA2-204ENST00000541017 ABCC9O60706 1549 aa15.61■□□□□ 0.09
PPFIA2-204ENST00000541017 ZCCHC6Q5VYS8 1495 aaKnown RBP15.51■□□□□ 0.07
PPFIA2-204ENST00000541017 DCAF1Q9Y4B6 1507 aa15.45■□□□□ 0.06
PPFIA2-204ENST00000541017 NACADO15069 1562 aa15.4■□□□□ 0.06
PPFIA2-204ENST00000541017 MYO15BQ96JP2 1530 aa15.39■□□□□ 0.05
PPFIA2-204ENST00000541017 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
PPFIA2-204ENST00000541017 SHROOM4Q9ULL8 1493 aa15.05■□□□□ 0
PPFIA2-204ENST00000541017 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
PPFIA2-204ENST00000541017 PABPN1Q86U42 306 aaKnown RBP eCLIP14.69□□□□□ -0.06
PPFIA2-204ENST00000541017 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
PPFIA2-204ENST00000541017 BAZ1AQ9NRL2 1556 aaPredicted RBP14.53□□□□□ -0.08
PPFIA2-204ENST00000541017 SMARCA2P51531 1590 aa14.36□□□□□ -0.11
PPFIA2-204ENST00000541017 BICRAQ9NZM4 1560 aa14.35□□□□□ -0.11
PPFIA2-204ENST00000541017 UNC13AQ9UPW8 1703 aa14.34□□□□□ -0.11
PPFIA2-204ENST00000541017 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
PPFIA2-204ENST00000541017 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
PPFIA2-204ENST00000541017 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
PPFIA2-204ENST00000541017 CECR2Q9BXF3 1484 aa14.23□□□□□ -0.13
PPFIA2-204ENST00000541017 EIF4G1Q04637 1599 aaKnown RBP14.21□□□□□ -0.14
PPFIA2-204ENST00000541017 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
PPFIA2-204ENST00000541017 ATAD2BQ9ULI0 1458 aa14.14□□□□□ -0.15
PPFIA2-204ENST00000541017 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
PPFIA2-204ENST00000541017 TOP2AP11388 1531 aaKnown RBP14.11□□□□□ -0.15
PPFIA2-204ENST00000541017 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
PPFIA2-204ENST00000541017 PEG3Q9GZU2 1588 aa14.06□□□□□ -0.16
PPFIA2-204ENST00000541017 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
PPFIA2-204ENST00000541017 WIZO95785 1651 aa13.98□□□□□ -0.17
PPFIA2-204ENST00000541017 TRIM41Q8WV44 630 aa13.95□□□□□ -0.18
PPFIA2-204ENST00000541017 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
PPFIA2-204ENST00000541017 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
PPFIA2-204ENST00000541017 CADPSQ9ULU8 1353 aa13.85□□□□□ -0.19
PPFIA2-204ENST00000541017 FAM9AQ8IZU1 332 aaPredicted RBP13.78□□□□□ -0.2
PPFIA2-204ENST00000541017 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
PPFIA2-204ENST00000541017 ERCC6Q03468 1493 aa13.75□□□□□ -0.21
PPFIA2-204ENST00000541017 LAMC3Q9Y6N6 1575 aa13.74□□□□□ -0.21
PPFIA2-204ENST00000541017 CHIC1Q5VXU3 224 aa13.72□□□□□ -0.21
PPFIA2-204ENST00000541017 CFTRP13569 1480 aa13.71□□□□□ -0.21
PPFIA2-204ENST00000541017 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
PPFIA2-204ENST00000541017 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
PPFIA2-204ENST00000541017 EEA1Q15075 1411 aa13.68□□□□□ -0.22
PPFIA2-204ENST00000541017 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
PPFIA2-204ENST00000541017 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
PPFIA2-204ENST00000541017 KIF27Q86VH2 1401 aa13.53□□□□□ -0.24
PPFIA2-204ENST00000541017 MRC2Q9UBG0 1479 aa13.52□□□□□ -0.24
PPFIA2-204ENST00000541017 PRDM2Q13029 1718 aa13.48□□□□□ -0.25
PPFIA2-204ENST00000541017 UBTFP17480 764 aaKnown RBP13.48□□□□□ -0.25
PPFIA2-204ENST00000541017 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
PPFIA2-204ENST00000541017 DNMBPQ6XZF7 1577 aa13.46□□□□□ -0.25
PPFIA2-204ENST00000541017 SOGA1O94964 1423 aa13.44□□□□□ -0.26
PPFIA2-204ENST00000541017 APLP2Q06481 763 aa13.43□□□□□ -0.26
PPFIA2-204ENST00000541017 NESP48681 1621 aa13.41□□□□□ -0.26
PPFIA2-204ENST00000541017 TOP2BQ02880 1626 aa13.4□□□□□ -0.26
PPFIA2-204ENST00000541017 IFT140Q96RY7 1462 aa13.39□□□□□ -0.27
PPFIA2-204ENST00000541017 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
PPFIA2-204ENST00000541017 CUX2O14529 1486 aa13.37□□□□□ -0.27
PPFIA2-204ENST00000541017 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
PPFIA2-204ENST00000541017 BIVM-ERCC5R4GMW8 1640 aa13.32□□□□□ -0.28
PPFIA2-204ENST00000541017 GOLGA3Q08378 1498 aa13.31□□□□□ -0.28
PPFIA2-204ENST00000541017 CUX1P39880 1505 aa13.3□□□□□ -0.28
PPFIA2-204ENST00000541017 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
PPFIA2-204ENST00000541017 WDR97A6NE52 1622 aa13.29□□□□□ -0.28
PPFIA2-204ENST00000541017 POLA1P09884 1462 aaPredicted RBP13.27□□□□□ -0.29
PPFIA2-204ENST00000541017 SYNJ1O43426 1573 aa13.26□□□□□ -0.29
PPFIA2-204ENST00000541017 WDR62O43379 1518 aa13.26□□□□□ -0.29
PPFIA2-204ENST00000541017 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
PPFIA2-204ENST00000541017 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
PPFIA2-204ENST00000541017 FBLN2P98095 1184 aa13.25□□□□□ -0.29
PPFIA2-204ENST00000541017 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
PPFIA2-204ENST00000541017 GRIN2BQ13224 1484 aa13.25□□□□□ -0.29
PPFIA2-204ENST00000541017 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
PPFIA2-204ENST00000541017 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
PPFIA2-204ENST00000541017 KIF21AQ7Z4S6 1674 aa13.22□□□□□ -0.29
PPFIA2-204ENST00000541017 RAPGEF2Q9Y4G8 1499 aa13.2□□□□□ -0.3
PPFIA2-204ENST00000541017 TDRD9Q8NDG6 1382 aaKnown RBP13.2□□□□□ -0.3
PPFIA2-204ENST00000541017 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
PPFIA2-204ENST00000541017 FHAD1B1AJZ9 1412 aa13.18□□□□□ -0.3
PPFIA2-204ENST00000541017 ERICH3Q5RHP9 1530 aa13.17□□□□□ -0.3
PPFIA2-204ENST00000541017 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
PPFIA2-204ENST00000541017 CUL7Q14999 1698 aa13.15□□□□□ -0.3
PPFIA2-204ENST00000541017 MAGI1Q96QZ7 1491 aaPredicted RBP13.15□□□□□ -0.3
PPFIA2-204ENST00000541017 IGF1RP08069 1367 aa13.12□□□□□ -0.31
PPFIA2-204ENST00000541017 CARMIL2Q6F5E8 1435 aa13.12□□□□□ -0.31
PPFIA2-204ENST00000541017 KIF21BO75037 1637 aa13.11□□□□□ -0.31
PPFIA2-204ENST00000541017 RANGAP1P46060 587 aaPredicted RBP13.1□□□□□ -0.31
PPFIA2-204ENST00000541017 THOC2Q8NI27 1593 aaKnown RBP13.09□□□□□ -0.31
PPFIA2-204ENST00000541017 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
PPFIA2-204ENST00000541017 CLIP1P30622 1438 aa13.07□□□□□ -0.32
PPFIA2-204ENST00000541017 ATP1B4Q9UN42 357 aaPredicted RBP13.07□□□□□ -0.32
PPFIA2-204ENST00000541017 AQRO60306 1485 aaKnown RBP eCLIP13.06□□□□□ -0.32
PPFIA2-204ENST00000541017 LOC105371045A0A1W2PR82 267 aa13.06□□□□□ -0.32
PPFIA2-204ENST00000541017 SYNJ2O15056 1496 aa13.05□□□□□ -0.32
PPFIA2-204ENST00000541017 PRXQ9BXM0 1461 aa13.04□□□□□ -0.32
PPFIA2-204ENST00000541017 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.33
PPFIA2-204ENST00000541017 NPM1P06748 294 aaKnown RBP eCLIP13.01□□□□□ -0.33
PPFIA2-204ENST00000541017 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
PPFIA2-204ENST00000541017 CEP162Q5TB80 1403 aa13□□□□□ -0.33
PPFIA2-204ENST00000541017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms