RNA–Protein interactions for RNA: ENST00000540915.5

ZNF384-211, Transcript of zinc finger protein 384, humanhuman

TSL 2

Gene ZNF384, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF384-211ENST00000540915 NISCHQ9Y2I1 1504 aa39.32■■■■□ 3.89
ZNF384-211ENST00000540915 CCDC180Q9P1Z9 1646 aa34.97■■■■□ 3.19
ZNF384-211ENST00000540915 ABCC9O60706 1549 aa34.02■■■■□ 3.04
ZNF384-211ENST00000540915 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
ZNF384-211ENST00000540915 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
ZNF384-211ENST00000540915 NACADO15069 1562 aa32.84■■■□□ 2.85
ZNF384-211ENST00000540915 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
ZNF384-211ENST00000540915 MYO15BQ96JP2 1530 aa32.68■■■□□ 2.82
ZNF384-211ENST00000540915 DCAF1Q9Y4B6 1507 aa32.58■■■□□ 2.81
ZNF384-211ENST00000540915 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
ZNF384-211ENST00000540915 SCRIBQ14160 1630 aa31.88■■■□□ 2.69
ZNF384-211ENST00000540915 PABPN1Q86U42 306 aaKnown RBP eCLIP31.77■■■□□ 2.68
ZNF384-211ENST00000540915 BICRAQ9NZM4 1560 aa31.72■■■□□ 2.67
ZNF384-211ENST00000540915 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
ZNF384-211ENST00000540915 EIF4G1Q04637 1599 aaKnown RBP30.95■■■□□ 2.54
ZNF384-211ENST00000540915 DNAJC5BQ9UF47 199 aa30.93■■■□□ 2.54
ZNF384-211ENST00000540915 CC2D2AQ9P2K1 1620 aa30.77■■■□□ 2.52
ZNF384-211ENST00000540915 CECR2Q9BXF3 1484 aa30.58■■■□□ 2.49
ZNF384-211ENST00000540915 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
ZNF384-211ENST00000540915 SMARCA4P51532 1647 aa30.51■■■□□ 2.47
ZNF384-211ENST00000540915 SMARCA2P51531 1590 aa30.34■■■□□ 2.45
ZNF384-211ENST00000540915 ATAD2BQ9ULI0 1458 aa30.27■■■□□ 2.44
ZNF384-211ENST00000540915 MROH2BQ7Z745 1585 aa30.26■■■□□ 2.43
ZNF384-211ENST00000540915 NCAPD3P42695 1498 aa30.25■■■□□ 2.43
ZNF384-211ENST00000540915 PEG3Q9GZU2 1588 aa30.19■■■□□ 2.42
ZNF384-211ENST00000540915 HMGXB3Q12766 1538 aa30.17■■■□□ 2.42
ZNF384-211ENST00000540915 BAZ1BQ9UIG0 1483 aaKnown RBP30.12■■■□□ 2.41
ZNF384-211ENST00000540915 RSF1Q96T23 1441 aaPredicted RBP29.98■■■□□ 2.39
ZNF384-211ENST00000540915 WIZO95785 1651 aa29.95■■■□□ 2.39
ZNF384-211ENST00000540915 TOP2AP11388 1531 aaKnown RBP29.72■■■□□ 2.35
ZNF384-211ENST00000540915 LAMC3Q9Y6N6 1575 aa29.49■■■□□ 2.31
ZNF384-211ENST00000540915 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
ZNF384-211ENST00000540915 NESP48681 1621 aa29.42■■■□□ 2.3
ZNF384-211ENST00000540915 CADPSQ9ULU8 1353 aa29.39■■■□□ 2.3
ZNF384-211ENST00000540915 SUPT5HO00267 1087 aaKnown RBP29.39■■■□□ 2.3
ZNF384-211ENST00000540915 PDS5BQ9NTI5 1447 aa29.32■■■□□ 2.28
ZNF384-211ENST00000540915 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
ZNF384-211ENST00000540915 CFTRP13569 1480 aa29.23■■■□□ 2.27
ZNF384-211ENST00000540915 KIF21AQ7Z4S6 1674 aa29.12■■■□□ 2.25
ZNF384-211ENST00000540915 PRDM2Q13029 1718 aa29.07■■■□□ 2.24
ZNF384-211ENST00000540915 FANCD2Q9BXW9 1451 aa29.07■■■□□ 2.24
ZNF384-211ENST00000540915 CEP164Q9UPV0 1460 aa29.06■■■□□ 2.24
ZNF384-211ENST00000540915 CUX2O14529 1486 aa29.03■■■□□ 2.24
ZNF384-211ENST00000540915 THOC2Q8NI27 1593 aaKnown RBP29■■■□□ 2.23
ZNF384-211ENST00000540915 MRC2Q9UBG0 1479 aa28.97■■■□□ 2.23
ZNF384-211ENST00000540915 WDR62O43379 1518 aa28.84■■■□□ 2.21
ZNF384-211ENST00000540915 URB2Q14146 1524 aaKnown RBP28.71■■■□□ 2.19
ZNF384-211ENST00000540915 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
ZNF384-211ENST00000540915 DNMBPQ6XZF7 1577 aa28.62■■■□□ 2.17
ZNF384-211ENST00000540915 TOPBP1Q92547 1522 aa28.6■■■□□ 2.17
ZNF384-211ENST00000540915 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
ZNF384-211ENST00000540915 CUX1P39880 1505 aa28.4■■■□□ 2.14
ZNF384-211ENST00000540915 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
ZNF384-211ENST00000540915 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
ZNF384-211ENST00000540915 FGD5Q6ZNL6 1462 aa28.33■■■□□ 2.13
ZNF384-211ENST00000540915 SOGA1O94964 1423 aa28.28■■■□□ 2.12
ZNF384-211ENST00000540915 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
ZNF384-211ENST00000540915 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
ZNF384-211ENST00000540915 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
ZNF384-211ENST00000540915 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
ZNF384-211ENST00000540915 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
ZNF384-211ENST00000540915 ZNF608Q9ULD9 1512 aaPredicted RBP28.19■■■□□ 2.1
ZNF384-211ENST00000540915 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
ZNF384-211ENST00000540915 WDR97A6NE52 1622 aa28.16■■■□□ 2.1
ZNF384-211ENST00000540915 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.081e-10■■■■□ 24.9
ZNF384-211ENST00000540915 ABCA10Q8WWZ4 1543 aa28.07■■■□□ 2.08
ZNF384-211ENST00000540915 TDRD9Q8NDG6 1382 aaKnown RBP28.06■■■□□ 2.08
ZNF384-211ENST00000540915 GRIN2BQ13224 1484 aa27.96■■■□□ 2.07
ZNF384-211ENST00000540915 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
ZNF384-211ENST00000540915 ABCA5Q8WWZ7 1642 aa27.93■■■□□ 2.06
ZNF384-211ENST00000540915 PBRM1Q86U86 1689 aa27.89■■■□□ 2.06
ZNF384-211ENST00000540915 MAGI1Q96QZ7 1491 aaPredicted RBP27.89■■■□□ 2.05
ZNF384-211ENST00000540915 DNAJC5Q9H3Z4 198 aa27.88■■■□□ 2.05
ZNF384-211ENST00000540915 SNAPC4Q5SXM2 1469 aa27.87■■■□□ 2.05
ZNF384-211ENST00000540915 OSCARQ8IYS5 282 aa27.84■■■□□ 2.05
ZNF384-211ENST00000540915 FBLN2P98095 1184 aa27.81■■■□□ 2.04
ZNF384-211ENST00000540915 TRIM41Q8WV44 630 aa27.8■■■□□ 2.04
ZNF384-211ENST00000540915 KIF27Q86VH2 1401 aa27.78■■■□□ 2.04
ZNF384-211ENST00000540915 ERICH3Q5RHP9 1530 aa27.77■■■□□ 2.04
ZNF384-211ENST00000540915 CHD1O14646 1710 aa27.76■■■□□ 2.03
ZNF384-211ENST00000540915 CHMP7Q8WUX9 453 aaPredicted RBP27.76■■■□□ 2.03
ZNF384-211ENST00000540915 SYNJ2O15056 1496 aa27.76■■■□□ 2.03
ZNF384-211ENST00000540915 ADAMTS12P58397 1594 aa27.68■■■□□ 2.02
ZNF384-211ENST00000540915 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
ZNF384-211ENST00000540915 CUL7Q14999 1698 aa27.58■■■□□ 2.01
ZNF384-211ENST00000540915 GRIN2AQ12879 1464 aa27.57■■■□□ 2
ZNF384-211ENST00000540915 IGF1RP08069 1367 aa27.53■■■□□ 2
ZNF384-211ENST00000540915 CLASP1Q7Z460 1538 aa27.46■■□□□ 1.99
ZNF384-211ENST00000540915 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
ZNF384-211ENST00000540915 CARMIL1Q5VZK9 1371 aa27.44■■□□□ 1.98
ZNF384-211ENST00000540915 NUP160Q12769 1436 aa27.41■■□□□ 1.98
ZNF384-211ENST00000540915 RUSC2Q8N2Y8 1516 aa27.39■■□□□ 1.98
ZNF384-211ENST00000540915 CEP170Q5SW79 1584 aa27.39■■□□□ 1.97
ZNF384-211ENST00000540915 EEA1Q15075 1411 aa27.38■■□□□ 1.97
ZNF384-211ENST00000540915 ARHGEF11O15085 1522 aa27.35■■□□□ 1.97
ZNF384-211ENST00000540915 RIMBP3CA6NJZ7 1639 aa27.32■■□□□ 1.96
ZNF384-211ENST00000540915 RIMBP3BA6NNM3 1639 aa27.32■■□□□ 1.96
ZNF384-211ENST00000540915 RIMBP3Q9UFD9 1639 aa27.32■■□□□ 1.96
ZNF384-211ENST00000540915 RAPGEF2Q9Y4G8 1499 aa27.32■■□□□ 1.96
ZNF384-211ENST00000540915 KIAA0586Q9BVV6 1533 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms