RNA–Protein interactions for RNA: ENST00000540836.1

B4GALNT3-205, Transcript of beta-1,4-N-acetyl-galactosaminyltransferase 3, humanhuman

TSL 4

Gene B4GALNT3, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
B4GALNT3-205ENST00000540836 NISCHQ9Y2I1 1504 aa23.53■■□□□ 1.36
B4GALNT3-205ENST00000540836 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
B4GALNT3-205ENST00000540836 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
B4GALNT3-205ENST00000540836 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
B4GALNT3-205ENST00000540836 ABCC9O60706 1549 aa20.4■□□□□ 0.86
B4GALNT3-205ENST00000540836 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
B4GALNT3-205ENST00000540836 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
B4GALNT3-205ENST00000540836 NACADO15069 1562 aa19.7■□□□□ 0.74
B4GALNT3-205ENST00000540836 MYO15BQ96JP2 1530 aa19.6■□□□□ 0.73
B4GALNT3-205ENST00000540836 ZCCHC6Q5VYS8 1495 aaKnown RBP19.58■□□□□ 0.72
B4GALNT3-205ENST00000540836 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
B4GALNT3-205ENST00000540836 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
B4GALNT3-205ENST00000540836 PABPN1Q86U42 306 aaKnown RBP eCLIP19.09■□□□□ 0.65
B4GALNT3-205ENST00000540836 SCRIBQ14160 1630 aa19.03■□□□□ 0.64
B4GALNT3-205ENST00000540836 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
B4GALNT3-205ENST00000540836 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
B4GALNT3-205ENST00000540836 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
B4GALNT3-205ENST00000540836 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
B4GALNT3-205ENST00000540836 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
B4GALNT3-205ENST00000540836 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
B4GALNT3-205ENST00000540836 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
B4GALNT3-205ENST00000540836 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
B4GALNT3-205ENST00000540836 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
B4GALNT3-205ENST00000540836 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
B4GALNT3-205ENST00000540836 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
B4GALNT3-205ENST00000540836 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
B4GALNT3-205ENST00000540836 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.49
B4GALNT3-205ENST00000540836 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
B4GALNT3-205ENST00000540836 PEG3Q9GZU2 1588 aa18.06■□□□□ 0.48
B4GALNT3-205ENST00000540836 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
B4GALNT3-205ENST00000540836 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
B4GALNT3-205ENST00000540836 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
B4GALNT3-205ENST00000540836 WIZO95785 1651 aa17.89■□□□□ 0.45
B4GALNT3-205ENST00000540836 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
B4GALNT3-205ENST00000540836 LAMC3Q9Y6N6 1575 aa17.69■□□□□ 0.42
B4GALNT3-205ENST00000540836 ERCC6Q03468 1493 aa17.69■□□□□ 0.42
B4GALNT3-205ENST00000540836 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
B4GALNT3-205ENST00000540836 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
B4GALNT3-205ENST00000540836 NESP48681 1621 aa17.61■□□□□ 0.41
B4GALNT3-205ENST00000540836 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
B4GALNT3-205ENST00000540836 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
B4GALNT3-205ENST00000540836 CFTRP13569 1480 aa17.52■□□□□ 0.4
B4GALNT3-205ENST00000540836 CUX2O14529 1486 aa17.46■□□□□ 0.39
B4GALNT3-205ENST00000540836 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
B4GALNT3-205ENST00000540836 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
B4GALNT3-205ENST00000540836 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
B4GALNT3-205ENST00000540836 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
B4GALNT3-205ENST00000540836 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
B4GALNT3-205ENST00000540836 THOC2Q8NI27 1593 aaKnown RBP17.34■□□□□ 0.37
B4GALNT3-205ENST00000540836 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
B4GALNT3-205ENST00000540836 WDR62O43379 1518 aa17.27■□□□□ 0.36
B4GALNT3-205ENST00000540836 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
B4GALNT3-205ENST00000540836 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
B4GALNT3-205ENST00000540836 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
B4GALNT3-205ENST00000540836 DNMBPQ6XZF7 1577 aa17.12■□□□□ 0.33
B4GALNT3-205ENST00000540836 IFT140Q96RY7 1462 aa17.07■□□□□ 0.32
B4GALNT3-205ENST00000540836 FOXD1Q16676 465 aa16.98■□□□□ 0.31
B4GALNT3-205ENST00000540836 SOGA1O94964 1423 aa16.97■□□□□ 0.31
B4GALNT3-205ENST00000540836 CUX1P39880 1505 aa16.97■□□□□ 0.31
B4GALNT3-205ENST00000540836 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
B4GALNT3-205ENST00000540836 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
B4GALNT3-205ENST00000540836 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
B4GALNT3-205ENST00000540836 TARBP1Q13395 1621 aaKnown RBP16.9■□□□□ 0.3
B4GALNT3-205ENST00000540836 DNAJC5Q9H3Z4 198 aa16.89■□□□□ 0.29
B4GALNT3-205ENST00000540836 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
B4GALNT3-205ENST00000540836 WDR97A6NE52 1622 aa16.88■□□□□ 0.29
B4GALNT3-205ENST00000540836 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
B4GALNT3-205ENST00000540836 RAD54L2Q9Y4B4 1467 aa16.87■□□□□ 0.29
B4GALNT3-205ENST00000540836 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
B4GALNT3-205ENST00000540836 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
B4GALNT3-205ENST00000540836 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
B4GALNT3-205ENST00000540836 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.28
B4GALNT3-205ENST00000540836 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
B4GALNT3-205ENST00000540836 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
B4GALNT3-205ENST00000540836 ABCA10Q8WWZ4 1543 aa16.8■□□□□ 0.28
B4GALNT3-205ENST00000540836 GRIN2BQ13224 1484 aa16.77■□□□□ 0.28
B4GALNT3-205ENST00000540836 GAPVD1Q14C86 1478 aa16.77■□□□□ 0.28
B4GALNT3-205ENST00000540836 FBLN2P98095 1184 aa16.74■□□□□ 0.27
B4GALNT3-205ENST00000540836 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
B4GALNT3-205ENST00000540836 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
B4GALNT3-205ENST00000540836 SNAPC4Q5SXM2 1469 aa16.68■□□□□ 0.26
B4GALNT3-205ENST00000540836 ABCA5Q8WWZ7 1642 aa16.68■□□□□ 0.26
B4GALNT3-205ENST00000540836 TRIM41Q8WV44 630 aa16.67■□□□□ 0.26
B4GALNT3-205ENST00000540836 PBRM1Q86U86 1689 aa16.66■□□□□ 0.26
B4GALNT3-205ENST00000540836 KIF27Q86VH2 1401 aa16.65■□□□□ 0.26
B4GALNT3-205ENST00000540836 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
B4GALNT3-205ENST00000540836 ERICH3Q5RHP9 1530 aa16.63■□□□□ 0.25
B4GALNT3-205ENST00000540836 CHD1O14646 1710 aa16.61■□□□□ 0.25
B4GALNT3-205ENST00000540836 FHAD1B1AJZ9 1412 aa16.59■□□□□ 0.25
B4GALNT3-205ENST00000540836 ADAMTS12P58397 1594 aa16.52■□□□□ 0.24
B4GALNT3-205ENST00000540836 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
B4GALNT3-205ENST00000540836 IGF1RP08069 1367 aa16.51■□□□□ 0.23
B4GALNT3-205ENST00000540836 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
B4GALNT3-205ENST00000540836 CUL7Q14999 1698 aa16.49■□□□□ 0.23
B4GALNT3-205ENST00000540836 ADRA2BP18089 450 aa16.48■□□□□ 0.23
B4GALNT3-205ENST00000540836 CARMIL1Q5VZK9 1371 aa16.46■□□□□ 0.23
B4GALNT3-205ENST00000540836 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
B4GALNT3-205ENST00000540836 NUP160Q12769 1436 aa16.43■□□□□ 0.22
B4GALNT3-205ENST00000540836 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
B4GALNT3-205ENST00000540836 RIMBP3CA6NJZ7 1639 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms