RNA–Protein interactions for RNA: ENST00000540712.1

LRR1-203, Transcript of leucine rich repeat protein 1, humanhuman

TSL 1 (best)

Gene LRR1, Length 1,597 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-203ENST00000540712 NISCHQ9Y2I1 1504 aa36.42■■■■□ 3.42
LRR1-203ENST00000540712 CCDC180Q9P1Z9 1646 aa32.26■■■□□ 2.75
LRR1-203ENST00000540712 ABCC9O60706 1549 aa31.42■■■□□ 2.62
LRR1-203ENST00000540712 DCAF8L2P0C7V8 631 aa30.49■■■□□ 2.47
LRR1-203ENST00000540712 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
LRR1-203ENST00000540712 NACADO15069 1562 aa30.32■■■□□ 2.44
LRR1-203ENST00000540712 RB1CC1Q8TDY2 1594 aa30.32■■■□□ 2.44
LRR1-203ENST00000540712 MYO15BQ96JP2 1530 aa30.19■■■□□ 2.42
LRR1-203ENST00000540712 DCAF1Q9Y4B6 1507 aa30.13■■■□□ 2.41
LRR1-203ENST00000540712 UNC13AQ9UPW8 1703 aa29.52■■■□□ 2.32
LRR1-203ENST00000540712 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
LRR1-203ENST00000540712 PABPN1Q86U42 306 aaKnown RBP eCLIP29.43■■■□□ 2.3
LRR1-203ENST00000540712 DNAJC5BQ9UF47 199 aa29.35■■■□□ 2.29
LRR1-203ENST00000540712 BICRAQ9NZM4 1560 aa29.31■■■□□ 2.28
LRR1-203ENST00000540712 SHROOM4Q9ULL8 1493 aa29.09■■■□□ 2.25
LRR1-203ENST00000540712 EIF4G1Q04637 1599 aaKnown RBP28.57■■■□□ 2.16
LRR1-203ENST00000540712 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
LRR1-203ENST00000540712 CECR2Q9BXF3 1484 aa28.33■■■□□ 2.13
LRR1-203ENST00000540712 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
LRR1-203ENST00000540712 SMARCA4P51532 1647 aa28.2■■■□□ 2.11
LRR1-203ENST00000540712 MROH2BQ7Z745 1585 aa28.05■■■□□ 2.08
LRR1-203ENST00000540712 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
LRR1-203ENST00000540712 SMARCA2P51531 1590 aa28.02■■■□□ 2.08
LRR1-203ENST00000540712 NCAPD3P42695 1498 aa27.97■■■□□ 2.07
LRR1-203ENST00000540712 PEG3Q9GZU2 1588 aa27.91■■■□□ 2.06
LRR1-203ENST00000540712 HMGXB3Q12766 1538 aa27.84■■■□□ 2.05
LRR1-203ENST00000540712 BAZ1BQ9UIG0 1483 aaKnown RBP27.84■■■□□ 2.05
LRR1-203ENST00000540712 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
LRR1-203ENST00000540712 WIZO95785 1651 aa27.76■■■□□ 2.03
LRR1-203ENST00000540712 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
LRR1-203ENST00000540712 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
LRR1-203ENST00000540712 NESP48681 1621 aa27.22■■□□□ 1.95
LRR1-203ENST00000540712 LAMC3Q9Y6N6 1575 aa27.21■■□□□ 1.95
LRR1-203ENST00000540712 CADPSQ9ULU8 1353 aa27.2■■□□□ 1.95
LRR1-203ENST00000540712 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
LRR1-203ENST00000540712 ERCC6Q03468 1493 aa27.13■■□□□ 1.93
LRR1-203ENST00000540712 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
LRR1-203ENST00000540712 CFTRP13569 1480 aa27.05■■□□□ 1.92
LRR1-203ENST00000540712 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
LRR1-203ENST00000540712 KIF21AQ7Z4S6 1674 aa26.88■■□□□ 1.89
LRR1-203ENST00000540712 CEP164Q9UPV0 1460 aa26.84■■□□□ 1.89
LRR1-203ENST00000540712 CUX2O14529 1486 aa26.83■■□□□ 1.89
LRR1-203ENST00000540712 PRDM2Q13029 1718 aa26.81■■□□□ 1.88
LRR1-203ENST00000540712 DNAJC5Q9H3Z4 198 aa26.75■■□□□ 1.87
LRR1-203ENST00000540712 MRC2Q9UBG0 1479 aa26.74■■□□□ 1.87
LRR1-203ENST00000540712 THOC2Q8NI27 1593 aaKnown RBP26.73■■□□□ 1.87
LRR1-203ENST00000540712 WDR62O43379 1518 aa26.61■■□□□ 1.85
LRR1-203ENST00000540712 URB2Q14146 1524 aaKnown RBP26.56■■□□□ 1.84
LRR1-203ENST00000540712 ABCC8Q09428 1581 aa26.51■■□□□ 1.84
LRR1-203ENST00000540712 TOPBP1Q92547 1522 aa26.45■■□□□ 1.82
LRR1-203ENST00000540712 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
LRR1-203ENST00000540712 CUX1P39880 1505 aa26.31■■□□□ 1.8
LRR1-203ENST00000540712 WRNQ14191 1432 aaPredicted RBP eCLIP26.28■■□□□ 1.8
LRR1-203ENST00000540712 IFT140Q96RY7 1462 aa26.27■■□□□ 1.8
LRR1-203ENST00000540712 POLA1P09884 1462 aaPredicted RBP26.25■■□□□ 1.79
LRR1-203ENST00000540712 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
LRR1-203ENST00000540712 SOGA1O94964 1423 aa26.18■■□□□ 1.78
LRR1-203ENST00000540712 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
LRR1-203ENST00000540712 RAD54L2Q9Y4B4 1467 aa26.14■■□□□ 1.77
LRR1-203ENST00000540712 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
LRR1-203ENST00000540712 BIVM-ERCC5R4GMW8 1640 aa26.12■■□□□ 1.77
LRR1-203ENST00000540712 TARBP1Q13395 1621 aaKnown RBP26.11■■□□□ 1.77
LRR1-203ENST00000540712 ZNF608Q9ULD9 1512 aaPredicted RBP26.08■■□□□ 1.77
LRR1-203ENST00000540712 TDRD9Q8NDG6 1382 aaKnown RBP26■■□□□ 1.75
LRR1-203ENST00000540712 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.754e-6■■■□□ 17.6
LRR1-203ENST00000540712 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
LRR1-203ENST00000540712 ABCA10Q8WWZ4 1543 aa25.97■■□□□ 1.75
LRR1-203ENST00000540712 WDR97A6NE52 1622 aa25.96■■□□□ 1.75
LRR1-203ENST00000540712 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
LRR1-203ENST00000540712 GAPVD1Q14C86 1478 aa25.87■■□□□ 1.73
LRR1-203ENST00000540712 GRIN2BQ13224 1484 aa25.84■■□□□ 1.73
LRR1-203ENST00000540712 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
LRR1-203ENST00000540712 SNAPC4Q5SXM2 1469 aa25.77■■□□□ 1.72
LRR1-203ENST00000540712 PBRM1Q86U86 1689 aa25.75■■□□□ 1.71
LRR1-203ENST00000540712 MAGI1Q96QZ7 1491 aaPredicted RBP25.74■■□□□ 1.71
LRR1-203ENST00000540712 FBLN2P98095 1184 aa25.74■■□□□ 1.71
LRR1-203ENST00000540712 KIF27Q86VH2 1401 aa25.73■■□□□ 1.71
LRR1-203ENST00000540712 OSCARQ8IYS5 282 aa25.7■■□□□ 1.71
LRR1-203ENST00000540712 CHMP7Q8WUX9 453 aaPredicted RBP25.69■■□□□ 1.7
LRR1-203ENST00000540712 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
LRR1-203ENST00000540712 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
LRR1-203ENST00000540712 CHIC1Q5VXU3 224 aa25.64■■□□□ 1.69
LRR1-203ENST00000540712 CHD1O14646 1710 aa25.6■■□□□ 1.69
LRR1-203ENST00000540712 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
LRR1-203ENST00000540712 IGF1RP08069 1367 aa25.57■■□□□ 1.68
LRR1-203ENST00000540712 ADAMTS12P58397 1594 aa25.56■■□□□ 1.68
LRR1-203ENST00000540712 GRIN2AQ12879 1464 aa25.49■■□□□ 1.67
LRR1-203ENST00000540712 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
LRR1-203ENST00000540712 CUL7Q14999 1698 aa25.47■■□□□ 1.67
LRR1-203ENST00000540712 CARMIL1Q5VZK9 1371 aa25.45■■□□□ 1.67
LRR1-203ENST00000540712 EEA1Q15075 1411 aa25.39■■□□□ 1.65
LRR1-203ENST00000540712 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
LRR1-203ENST00000540712 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
LRR1-203ENST00000540712 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
LRR1-203ENST00000540712 NUP160Q12769 1436 aa25.35■■□□□ 1.65
LRR1-203ENST00000540712 CSRNP3Q8WYN3 585 aa25.34■■□□□ 1.65
LRR1-203ENST00000540712 CLASP1Q7Z460 1538 aa25.33■■□□□ 1.65
LRR1-203ENST00000540712 CEP170Q5SW79 1584 aa25.32■■□□□ 1.64
LRR1-203ENST00000540712 FAM9AQ8IZU1 332 aaPredicted RBP25.32■■□□□ 1.64
LRR1-203ENST00000540712 RAPGEF2Q9Y4G8 1499 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms