RNA–Protein interactions for RNA: ENST00000540024.1

LINC02389-202, Transcript of long intergenic non-protein coding RNA 2389, humanhuman

TSL 4 BASIC

Gene LINC02389, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02389-202ENST00000540024 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
LINC02389-202ENST00000540024 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
LINC02389-202ENST00000540024 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
LINC02389-202ENST00000540024 ABCC9O60706 1549 aa16.78■□□□□ 0.28
LINC02389-202ENST00000540024 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
LINC02389-202ENST00000540024 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
LINC02389-202ENST00000540024 CCDC180Q9P1Z9 1646 aa16.41■□□□□ 0.22
LINC02389-202ENST00000540024 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
LINC02389-202ENST00000540024 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
LINC02389-202ENST00000540024 RB1CC1Q8TDY2 1594 aa15.85■□□□□ 0.13
LINC02389-202ENST00000540024 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.12
LINC02389-202ENST00000540024 NACADO15069 1562 aa15.72■□□□□ 0.11
LINC02389-202ENST00000540024 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
LINC02389-202ENST00000540024 FOXD1Q16676 465 aa15.5■□□□□ 0.07
LINC02389-202ENST00000540024 MYO15BQ96JP2 1530 aa15.47■□□□□ 0.07
LINC02389-202ENST00000540024 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
LINC02389-202ENST00000540024 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
LINC02389-202ENST00000540024 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
LINC02389-202ENST00000540024 DCAF1Q9Y4B6 1507 aa15.21■□□□□ 0.03
LINC02389-202ENST00000540024 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
LINC02389-202ENST00000540024 SCRIBQ14160 1630 aa15.06■□□□□ 0
LINC02389-202ENST00000540024 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
LINC02389-202ENST00000540024 CC2D2AQ9P2K1 1620 aa15.02□□□□□ -0.01
LINC02389-202ENST00000540024 EIF4G1Q04637 1599 aaKnown RBP14.99□□□□□ -0.01
LINC02389-202ENST00000540024 MSH5O43196 834 aa14.98□□□□□ -0.01
LINC02389-202ENST00000540024 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
LINC02389-202ENST00000540024 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
LINC02389-202ENST00000540024 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
LINC02389-202ENST00000540024 CUX2O14529 1486 aa14.52□□□□□ -0.08
LINC02389-202ENST00000540024 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
LINC02389-202ENST00000540024 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
LINC02389-202ENST00000540024 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
LINC02389-202ENST00000540024 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
LINC02389-202ENST00000540024 HMGXB3Q12766 1538 aa14.36□□□□□ -0.11
LINC02389-202ENST00000540024 BAZ1AQ9NRL2 1556 aaPredicted RBP14.34□□□□□ -0.11
LINC02389-202ENST00000540024 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
LINC02389-202ENST00000540024 NESP48681 1621 aa14.3□□□□□ -0.12
LINC02389-202ENST00000540024 PDS5BQ9NTI5 1447 aa14.28□□□□□ -0.12
LINC02389-202ENST00000540024 PIAS4Q8N2W9 510 aaPredicted RBP14.23□□□□□ -0.13
LINC02389-202ENST00000540024 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
LINC02389-202ENST00000540024 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
LINC02389-202ENST00000540024 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
LINC02389-202ENST00000540024 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
LINC02389-202ENST00000540024 TRIM41Q8WV44 630 aa14.11□□□□□ -0.15
LINC02389-202ENST00000540024 MRC2Q9UBG0 1479 aa14.07□□□□□ -0.16
LINC02389-202ENST00000540024 THOC2Q8NI27 1593 aaKnown RBP14.07□□□□□ -0.16
LINC02389-202ENST00000540024 PPP6R1Q9UPN7 881 aa14.06□□□□□ -0.16
LINC02389-202ENST00000540024 ADRA2BP18089 450 aa14.03□□□□□ -0.16
LINC02389-202ENST00000540024 CEP164Q9UPV0 1460 aa14□□□□□ -0.17
LINC02389-202ENST00000540024 OSCARQ8IYS5 282 aa13.99□□□□□ -0.17
LINC02389-202ENST00000540024 FANCD2Q9BXW9 1451 aa13.98□□□□□ -0.17
LINC02389-202ENST00000540024 WDR62O43379 1518 aa13.95□□□□□ -0.18
LINC02389-202ENST00000540024 CFTRP13569 1480 aa13.93□□□□□ -0.18
LINC02389-202ENST00000540024 RSF1Q96T23 1441 aaPredicted RBP13.92□□□□□ -0.18
LINC02389-202ENST00000540024 WIZO95785 1651 aa13.89□□□□□ -0.19
LINC02389-202ENST00000540024 KIF21AQ7Z4S6 1674 aa13.89□□□□□ -0.19
LINC02389-202ENST00000540024 TOP2AP11388 1531 aaKnown RBP13.83□□□□□ -0.2
LINC02389-202ENST00000540024 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
LINC02389-202ENST00000540024 IFT140Q96RY7 1462 aa13.75□□□□□ -0.21
LINC02389-202ENST00000540024 CCDC88BA6NC98 1476 aa13.73□□□□□ -0.21
LINC02389-202ENST00000540024 FBLN2P98095 1184 aa13.7□□□□□ -0.22
LINC02389-202ENST00000540024 ABCC8Q09428 1581 aa13.69□□□□□ -0.22
LINC02389-202ENST00000540024 ZNF608Q9ULD9 1512 aaPredicted RBP13.66□□□□□ -0.22
LINC02389-202ENST00000540024 CYB5RLQ6IPT4 315 aa13.66□□□□□ -0.22
LINC02389-202ENST00000540024 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
LINC02389-202ENST00000540024 TRHP20396 242 aaPredicted RBP13.61□□□□□ -0.23
LINC02389-202ENST00000540024 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC02389-202ENST00000540024 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
LINC02389-202ENST00000540024 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
LINC02389-202ENST00000540024 ARHGEF11O15085 1522 aa13.57□□□□□ -0.24
LINC02389-202ENST00000540024 SOGA1O94964 1423 aa13.55□□□□□ -0.24
LINC02389-202ENST00000540024 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
LINC02389-202ENST00000540024 TDRD9Q8NDG6 1382 aaKnown RBP13.54□□□□□ -0.24
LINC02389-202ENST00000540024 RIMBP3CA6NJZ7 1639 aa13.51□□□□□ -0.25
LINC02389-202ENST00000540024 RIMBP3BA6NNM3 1639 aa13.51□□□□□ -0.25
LINC02389-202ENST00000540024 RIMBP3Q9UFD9 1639 aa13.51□□□□□ -0.25
LINC02389-202ENST00000540024 POLA1P09884 1462 aaPredicted RBP13.51□□□□□ -0.25
LINC02389-202ENST00000540024 EIF4G3O43432 1585 aaKnown RBP13.48□□□□□ -0.25
LINC02389-202ENST00000540024 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
LINC02389-202ENST00000540024 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
LINC02389-202ENST00000540024 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
LINC02389-202ENST00000540024 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
LINC02389-202ENST00000540024 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
LINC02389-202ENST00000540024 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
LINC02389-202ENST00000540024 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
LINC02389-202ENST00000540024 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
LINC02389-202ENST00000540024 PRDM2Q13029 1718 aa13.37□□□□□ -0.27
LINC02389-202ENST00000540024 SYNJ2O15056 1496 aa13.36□□□□□ -0.27
LINC02389-202ENST00000540024 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
LINC02389-202ENST00000540024 WDR97A6NE52 1622 aa13.34□□□□□ -0.27
LINC02389-202ENST00000540024 GAPVD1Q14C86 1478 aa13.33□□□□□ -0.28
LINC02389-202ENST00000540024 CUX1P39880 1505 aa13.32□□□□□ -0.28
LINC02389-202ENST00000540024 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
LINC02389-202ENST00000540024 CLASP1Q7Z460 1538 aa13.28□□□□□ -0.28
LINC02389-202ENST00000540024 CHD1O14646 1710 aa13.26□□□□□ -0.29
LINC02389-202ENST00000540024 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
LINC02389-202ENST00000540024 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
LINC02389-202ENST00000540024 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
LINC02389-202ENST00000540024 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC02389-202ENST00000540024 NUP160Q12769 1436 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms