RNA–Protein interactions for RNA: ENST00000539967.6

RFX4-206, Transcript of regulatory factor X4, humanhuman

TSL 5

Gene RFX4, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-206ENST00000539967 NISCHQ9Y2I1 1504 aa31.01■■■□□ 2.55
RFX4-206ENST00000539967 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
RFX4-206ENST00000539967 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
RFX4-206ENST00000539967 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
RFX4-206ENST00000539967 ABCC9O60706 1549 aa26.53■■□□□ 1.84
RFX4-206ENST00000539967 DCAF8L2P0C7V8 631 aa25.94■■□□□ 1.74
RFX4-206ENST00000539967 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.73
RFX4-206ENST00000539967 NACADO15069 1562 aa25.53■■□□□ 1.68
RFX4-206ENST00000539967 DCAF1Q9Y4B6 1507 aa25.5■■□□□ 1.67
RFX4-206ENST00000539967 RB1CC1Q8TDY2 1594 aa25.49■■□□□ 1.67
RFX4-206ENST00000539967 MYO15BQ96JP2 1530 aa25.39■■□□□ 1.66
RFX4-206ENST00000539967 UNC13AQ9UPW8 1703 aa25.18■■□□□ 1.62
RFX4-206ENST00000539967 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
RFX4-206ENST00000539967 SHROOM4Q9ULL8 1493 aa25.04■■□□□ 1.6
RFX4-206ENST00000539967 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
RFX4-206ENST00000539967 PABPN1Q86U42 306 aaKnown RBP eCLIP24.94■■□□□ 1.58
RFX4-206ENST00000539967 PHF23Q9BUL5 403 aaPredicted RBP24.9■■□□□ 1.58
RFX4-206ENST00000539967 BICRAQ9NZM4 1560 aa24.87■■□□□ 1.57
RFX4-206ENST00000539967 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
RFX4-206ENST00000539967 EIF4G1Q04637 1599 aaKnown RBP24.11■■□□□ 1.45
RFX4-206ENST00000539967 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
RFX4-206ENST00000539967 MROH2BQ7Z745 1585 aa24.02■■□□□ 1.44
RFX4-206ENST00000539967 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
RFX4-206ENST00000539967 CC2D2AQ9P2K1 1620 aa23.96■■□□□ 1.43
RFX4-206ENST00000539967 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
RFX4-206ENST00000539967 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
RFX4-206ENST00000539967 WIZO95785 1651 aa23.83■■□□□ 1.41
RFX4-206ENST00000539967 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
RFX4-206ENST00000539967 SUPT5HO00267 1087 aaKnown RBP23.71■■□□□ 1.39
RFX4-206ENST00000539967 PEG3Q9GZU2 1588 aa23.63■■□□□ 1.37
RFX4-206ENST00000539967 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
RFX4-206ENST00000539967 NCAPD3P42695 1498 aa23.59■■□□□ 1.37
RFX4-206ENST00000539967 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
RFX4-206ENST00000539967 HMGXB3Q12766 1538 aa23.48■■□□□ 1.35
RFX4-206ENST00000539967 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
RFX4-206ENST00000539967 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
RFX4-206ENST00000539967 FOXD1Q16676 465 aa23.2■■□□□ 1.3
RFX4-206ENST00000539967 NESP48681 1621 aa23.14■■□□□ 1.29
RFX4-206ENST00000539967 CADPSQ9ULU8 1353 aa22.96■■□□□ 1.27
RFX4-206ENST00000539967 CFTRP13569 1480 aa22.9■■□□□ 1.26
RFX4-206ENST00000539967 LAMC3Q9Y6N6 1575 aa22.88■■□□□ 1.25
RFX4-206ENST00000539967 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
RFX4-206ENST00000539967 KIF21AQ7Z4S6 1674 aa22.83■■□□□ 1.24
RFX4-206ENST00000539967 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
RFX4-206ENST00000539967 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
RFX4-206ENST00000539967 ERCC6Q03468 1493 aa22.7■■□□□ 1.22
RFX4-206ENST00000539967 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
RFX4-206ENST00000539967 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
RFX4-206ENST00000539967 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
RFX4-206ENST00000539967 THOC2Q8NI27 1593 aaKnown RBP22.56■■□□□ 1.2
RFX4-206ENST00000539967 URB2Q14146 1524 aaKnown RBP22.55■■□□□ 1.2
RFX4-206ENST00000539967 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
RFX4-206ENST00000539967 CUX1P39880 1505 aa22.48■■□□□ 1.19
RFX4-206ENST00000539967 SYNJ1O43426 1573 aa22.45■■□□□ 1.18
RFX4-206ENST00000539967 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
RFX4-206ENST00000539967 WDR62O43379 1518 aa22.41■■□□□ 1.18
RFX4-206ENST00000539967 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
RFX4-206ENST00000539967 DNMBPQ6XZF7 1577 aa22.39■■□□□ 1.18
RFX4-206ENST00000539967 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
RFX4-206ENST00000539967 BIVM-ERCC5R4GMW8 1640 aa22.31■■□□□ 1.16
RFX4-206ENST00000539967 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
RFX4-206ENST00000539967 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
RFX4-206ENST00000539967 CUX2O14529 1486 aa22.28■■□□□ 1.16
RFX4-206ENST00000539967 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
RFX4-206ENST00000539967 TRIM41Q8WV44 630 aa22.22■■□□□ 1.15
RFX4-206ENST00000539967 SOGA1O94964 1423 aa22.19■■□□□ 1.14
RFX4-206ENST00000539967 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
RFX4-206ENST00000539967 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
RFX4-206ENST00000539967 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
RFX4-206ENST00000539967 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
RFX4-206ENST00000539967 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
RFX4-206ENST00000539967 AQRO60306 1485 aaKnown RBP eCLIP22.08■■□□□ 1.12
RFX4-206ENST00000539967 RUSC2Q8N2Y8 1516 aa22.07■■□□□ 1.12
RFX4-206ENST00000539967 PPP6R1Q9UPN7 881 aa22.07■■□□□ 1.12
RFX4-206ENST00000539967 ABCA10Q8WWZ4 1543 aa22.02■■□□□ 1.12
RFX4-206ENST00000539967 ADRA2BP18089 450 aa22■■□□□ 1.11
RFX4-206ENST00000539967 EIF4G3O43432 1585 aaKnown RBP21.99■■□□□ 1.11
RFX4-206ENST00000539967 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
RFX4-206ENST00000539967 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
RFX4-206ENST00000539967 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
RFX4-206ENST00000539967 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
RFX4-206ENST00000539967 KIF27Q86VH2 1401 aa21.85■■□□□ 1.09
RFX4-206ENST00000539967 IGF1RP08069 1367 aa21.82■■□□□ 1.08
RFX4-206ENST00000539967 SNAPC4Q5SXM2 1469 aa21.82■■□□□ 1.08
RFX4-206ENST00000539967 GRIN2BQ13224 1484 aa21.81■■□□□ 1.08
RFX4-206ENST00000539967 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
RFX4-206ENST00000539967 PIAS4Q8N2W9 510 aaPredicted RBP21.77■■□□□ 1.08
RFX4-206ENST00000539967 CHD1O14646 1710 aa21.73■■□□□ 1.07
RFX4-206ENST00000539967 FBLN2P98095 1184 aa21.73■■□□□ 1.07
RFX4-206ENST00000539967 ERICH3Q5RHP9 1530 aa21.72■■□□□ 1.07
RFX4-206ENST00000539967 ADAMTS12P58397 1594 aa21.71■■□□□ 1.07
RFX4-206ENST00000539967 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
RFX4-206ENST00000539967 MAGI1Q96QZ7 1491 aaPredicted RBP21.66■■□□□ 1.06
RFX4-206ENST00000539967 CARMIL1Q5VZK9 1371 aa21.66■■□□□ 1.06
RFX4-206ENST00000539967 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
RFX4-206ENST00000539967 FHAD1B1AJZ9 1412 aa21.63■■□□□ 1.05
RFX4-206ENST00000539967 CUL7Q14999 1698 aa21.62■■□□□ 1.05
RFX4-206ENST00000539967 SYNJ2O15056 1496 aa21.61■■□□□ 1.05
RFX4-206ENST00000539967 EEA1Q15075 1411 aa21.61■■□□□ 1.05
RFX4-206ENST00000539967 PRXQ9BXM0 1461 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms