RNA–Protein interactions for RNA: ENST00000539672.1

RECQL-207, Transcript of RecQ like helicase, humanhuman

TSL 5

Gene RECQL, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL-207ENST00000539672 AEBP2Q6ZN18 517 aaPredicted RBP26.95■■□□□ 1.9
RECQL-207ENST00000539672 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
RECQL-207ENST00000539672 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
RECQL-207ENST00000539672 SENP3Q9H4L4 574 aaPredicted RBP22.93■■□□□ 1.26
RECQL-207ENST00000539672 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
RECQL-207ENST00000539672 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
RECQL-207ENST00000539672 ABCC9O60706 1549 aa21.38■■□□□ 1.01
RECQL-207ENST00000539672 FOXD1Q16676 465 aa21.36■■□□□ 1.01
RECQL-207ENST00000539672 PLPPR3Q6T4P5 718 aa20.74■□□□□ 0.91
RECQL-207ENST00000539672 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
RECQL-207ENST00000539672 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
RECQL-207ENST00000539672 NACADO15069 1562 aa20.41■□□□□ 0.86
RECQL-207ENST00000539672 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
RECQL-207ENST00000539672 ZCCHC6Q5VYS8 1495 aaKnown RBP20.21■□□□□ 0.83
RECQL-207ENST00000539672 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
RECQL-207ENST00000539672 ADRA2BP18089 450 aa20.15■□□□□ 0.82
RECQL-207ENST00000539672 DCAF1Q9Y4B6 1507 aa20.08■□□□□ 0.81
RECQL-207ENST00000539672 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
RECQL-207ENST00000539672 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
RECQL-207ENST00000539672 MSH5O43196 834 aa19.87■□□□□ 0.77
RECQL-207ENST00000539672 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
RECQL-207ENST00000539672 BICRAQ9NZM4 1560 aa19.81■□□□□ 0.76
RECQL-207ENST00000539672 DNAJC5BQ9UF47 199 aa19.77■□□□□ 0.76
RECQL-207ENST00000539672 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
RECQL-207ENST00000539672 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
RECQL-207ENST00000539672 EIF4G1Q04637 1599 aaKnown RBP19.32■□□□□ 0.68
RECQL-207ENST00000539672 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
RECQL-207ENST00000539672 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
RECQL-207ENST00000539672 POTEDQ86YR6 584 aa18.99■□□□□ 0.63
RECQL-207ENST00000539672 SMARCA4P51532 1647 aa18.86■□□□□ 0.61
RECQL-207ENST00000539672 NCAPD3P42695 1498 aa18.86■□□□□ 0.61
RECQL-207ENST00000539672 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
RECQL-207ENST00000539672 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
RECQL-207ENST00000539672 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
RECQL-207ENST00000539672 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
RECQL-207ENST00000539672 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
RECQL-207ENST00000539672 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
RECQL-207ENST00000539672 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
RECQL-207ENST00000539672 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
RECQL-207ENST00000539672 WIZO95785 1651 aa18.49■□□□□ 0.55
RECQL-207ENST00000539672 ERCC6Q03468 1493 aa18.46■□□□□ 0.54
RECQL-207ENST00000539672 NESP48681 1621 aa18.43■□□□□ 0.54
RECQL-207ENST00000539672 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
RECQL-207ENST00000539672 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
RECQL-207ENST00000539672 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
RECQL-207ENST00000539672 CADPSQ9ULU8 1353 aa18.33■□□□□ 0.53
RECQL-207ENST00000539672 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
RECQL-207ENST00000539672 PDS5BQ9NTI5 1447 aa18.29■□□□□ 0.52
RECQL-207ENST00000539672 CUX2O14529 1486 aa18.27■□□□□ 0.52
RECQL-207ENST00000539672 PPP4R3CPQ6ZMV5 832 aa18.24■□□□□ 0.51
RECQL-207ENST00000539672 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
RECQL-207ENST00000539672 CFTRP13569 1480 aa18.16■□□□□ 0.5
RECQL-207ENST00000539672 CCDC88BA6NC98 1476 aa18.13■□□□□ 0.49
RECQL-207ENST00000539672 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
RECQL-207ENST00000539672 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
RECQL-207ENST00000539672 FANCD2Q9BXW9 1451 aa18.1■□□□□ 0.49
RECQL-207ENST00000539672 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
RECQL-207ENST00000539672 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.49
RECQL-207ENST00000539672 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
RECQL-207ENST00000539672 WDR62O43379 1518 aa17.99■□□□□ 0.47
RECQL-207ENST00000539672 DNAJC5Q9H3Z4 198 aa17.93■□□□□ 0.46
RECQL-207ENST00000539672 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
RECQL-207ENST00000539672 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
RECQL-207ENST00000539672 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
RECQL-207ENST00000539672 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
RECQL-207ENST00000539672 TOPBP1Q92547 1522 aa17.77■□□□□ 0.44
RECQL-207ENST00000539672 DNMBPQ6XZF7 1577 aa17.72■□□□□ 0.43
RECQL-207ENST00000539672 IFT140Q96RY7 1462 aa17.72■□□□□ 0.43
RECQL-207ENST00000539672 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
RECQL-207ENST00000539672 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
RECQL-207ENST00000539672 POLA1P09884 1462 aaPredicted RBP17.62■□□□□ 0.41
RECQL-207ENST00000539672 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
RECQL-207ENST00000539672 SOGA1O94964 1423 aa17.59■□□□□ 0.41
RECQL-207ENST00000539672 CUX1P39880 1505 aa17.58■□□□□ 0.41
RECQL-207ENST00000539672 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.4
RECQL-207ENST00000539672 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
RECQL-207ENST00000539672 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
RECQL-207ENST00000539672 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
RECQL-207ENST00000539672 AQRO60306 1485 aaKnown RBP eCLIP17.55■□□□□ 0.4
RECQL-207ENST00000539672 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
RECQL-207ENST00000539672 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
RECQL-207ENST00000539672 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
RECQL-207ENST00000539672 EIF4G3O43432 1585 aaKnown RBP17.51■□□□□ 0.39
RECQL-207ENST00000539672 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
RECQL-207ENST00000539672 FBLN2P98095 1184 aa17.43■□□□□ 0.38
RECQL-207ENST00000539672 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
RECQL-207ENST00000539672 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
RECQL-207ENST00000539672 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
RECQL-207ENST00000539672 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
RECQL-207ENST00000539672 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
RECQL-207ENST00000539672 SNAPC4Q5SXM2 1469 aa17.36■□□□□ 0.37
RECQL-207ENST00000539672 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
RECQL-207ENST00000539672 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
RECQL-207ENST00000539672 CHMP7Q8WUX9 453 aaPredicted RBP17.35■□□□□ 0.37
RECQL-207ENST00000539672 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
RECQL-207ENST00000539672 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.37
RECQL-207ENST00000539672 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
RECQL-207ENST00000539672 CHD1O14646 1710 aa17.28■□□□□ 0.36
RECQL-207ENST00000539672 SYNJ2O15056 1496 aa17.27■□□□□ 0.36
RECQL-207ENST00000539672 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms