RNA–Protein interactions for RNA: ENST00000539595.5

TRPT1-208, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 5

Gene TRPT1, Length 1,809 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-208ENST00000539595 NISCHQ9Y2I1 1504 aa39.49■■■■□ 3.91
TRPT1-208ENST00000539595 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
TRPT1-208ENST00000539595 ZCCHC6Q5VYS8 1495 aaKnown RBP33.3■■■□□ 2.92
TRPT1-208ENST00000539595 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
TRPT1-208ENST00000539595 DCAF1Q9Y4B6 1507 aa32.6■■■□□ 2.81
TRPT1-208ENST00000539595 DCAF8L2P0C7V8 631 aa32.48■■■□□ 2.79
TRPT1-208ENST00000539595 MYO15BQ96JP2 1530 aa31.98■■■□□ 2.71
TRPT1-208ENST00000539595 ABCC9O60706 1549 aa31.87■■■□□ 2.69
TRPT1-208ENST00000539595 SUPT5HO00267 1087 aaKnown RBP31.72■■■□□ 2.67
TRPT1-208ENST00000539595 NACADO15069 1562 aa31.65■■■□□ 2.66
TRPT1-208ENST00000539595 SCRIBQ14160 1630 aa31.57■■■□□ 2.64
TRPT1-208ENST00000539595 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.6
TRPT1-208ENST00000539595 RSF1Q96T23 1441 aaPredicted RBP30.87■■■□□ 2.53
TRPT1-208ENST00000539595 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.51
TRPT1-208ENST00000539595 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.5
TRPT1-208ENST00000539595 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
TRPT1-208ENST00000539595 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.48
TRPT1-208ENST00000539595 BAZ1AQ9NRL2 1556 aaPredicted RBP30.43■■■□□ 2.46
TRPT1-208ENST00000539595 BICRAQ9NZM4 1560 aa30.36■■■□□ 2.45
TRPT1-208ENST00000539595 WIZO95785 1651 aa30.35■■■□□ 2.45
TRPT1-208ENST00000539595 SMARCA4P51532 1647 aa30.25■■■□□ 2.43
TRPT1-208ENST00000539595 PABPN1Q86U42 306 aaKnown RBP eCLIP30.19■■■□□ 2.42
TRPT1-208ENST00000539595 TOP2AP11388 1531 aaKnown RBP30.02■■■□□ 2.4
TRPT1-208ENST00000539595 PEG3Q9GZU2 1588 aa29.82■■■□□ 2.36
TRPT1-208ENST00000539595 EIF4G1Q04637 1599 aaKnown RBP29.78■■■□□ 2.36
TRPT1-208ENST00000539595 SMARCA2P51531 1590 aa29.78■■■□□ 2.36
TRPT1-208ENST00000539595 CCDC88BA6NC98 1476 aa29.74■■■□□ 2.35
TRPT1-208ENST00000539595 TRIM41Q8WV44 630 aa29.73■■■□□ 2.35
TRPT1-208ENST00000539595 ATAD2BQ9ULI0 1458 aa29.61■■■□□ 2.33
TRPT1-208ENST00000539595 LOC105371045A0A1W2PR82 267 aa29.52■■■□□ 2.32
TRPT1-208ENST00000539595 BAZ1BQ9UIG0 1483 aaKnown RBP29.48■■■□□ 2.31
TRPT1-208ENST00000539595 ABCC8Q09428 1581 aa29.34■■■□□ 2.29
TRPT1-208ENST00000539595 FAM9AQ8IZU1 332 aaPredicted RBP29.27■■■□□ 2.28
TRPT1-208ENST00000539595 HMGXB3Q12766 1538 aa29.24■■■□□ 2.27
TRPT1-208ENST00000539595 NCAPD3P42695 1498 aa29.22■■■□□ 2.27
TRPT1-208ENST00000539595 WRNQ14191 1432 aaPredicted RBP eCLIP29.04■■■□□ 2.24
TRPT1-208ENST00000539595 SYNJ1O43426 1573 aa28.93■■■□□ 2.22
TRPT1-208ENST00000539595 SOGA1O94964 1423 aa28.9■■■□□ 2.22
TRPT1-208ENST00000539595 EHMT2Q96KQ7 1210 aa28.9■■■□□ 2.22
TRPT1-208ENST00000539595 EEA1Q15075 1411 aa28.87■■■□□ 2.21
TRPT1-208ENST00000539595 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
TRPT1-208ENST00000539595 RUSC2Q8N2Y8 1516 aa28.77■■■□□ 2.2
TRPT1-208ENST00000539595 CFTRP13569 1480 aa28.75■■■□□ 2.19
TRPT1-208ENST00000539595 PCGF6Q9BYE7 350 aa28.75■■■□□ 2.19
TRPT1-208ENST00000539595 TOP2BQ02880 1626 aa28.72■■■□□ 2.19
TRPT1-208ENST00000539595 BIVM-ERCC5R4GMW8 1640 aa28.68■■■□□ 2.18
TRPT1-208ENST00000539595 CSRNP3Q8WYN3 585 aa28.68■■■□□ 2.18
TRPT1-208ENST00000539595 PRDM2Q13029 1718 aa28.62■■■□□ 2.17
TRPT1-208ENST00000539595 TRIM26Q12899 539 aaPredicted RBP28.55■■■□□ 2.16
TRPT1-208ENST00000539595 CUX1P39880 1505 aa28.55■■■□□ 2.16
TRPT1-208ENST00000539595 TNIKQ9UKE5 1360 aa28.54■■■□□ 2.16
TRPT1-208ENST00000539595 GOLGA3Q08378 1498 aa28.54■■■□□ 2.16
TRPT1-208ENST00000539595 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
TRPT1-208ENST00000539595 KIF21BO75037 1637 aa28.5■■■□□ 2.15
TRPT1-208ENST00000539595 CEP162Q5TB80 1403 aa28.48■■■□□ 2.15
TRPT1-208ENST00000539595 CEP164Q9UPV0 1460 aa28.47■■■□□ 2.15
TRPT1-208ENST00000539595 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
TRPT1-208ENST00000539595 HRCP23327 699 aa28.37■■■□□ 2.13
TRPT1-208ENST00000539595 RAPGEF2Q9Y4G8 1499 aa28.27■■■□□ 2.12
TRPT1-208ENST00000539595 FANCD2Q9BXW9 1451 aa28.25■■■□□ 2.11
TRPT1-208ENST00000539595 KIF27Q86VH2 1401 aa28.23■■■□□ 2.11
TRPT1-208ENST00000539595 PRXQ9BXM0 1461 aa28.2■■■□□ 2.1
TRPT1-208ENST00000539595 ERICH3Q5RHP9 1530 aa28.19■■■□□ 2.1
TRPT1-208ENST00000539595 NESP48681 1621 aa28.18■■■□□ 2.1
TRPT1-208ENST00000539595 FGD5Q6ZNL6 1462 aa28.14■■■□□ 2.1
TRPT1-208ENST00000539595 LAMC3Q9Y6N6 1575 aa28.13■■■□□ 2.09
TRPT1-208ENST00000539595 PPARGC1BQ86YN6 1023 aaKnown RBP28.13■■■□□ 2.09
TRPT1-208ENST00000539595 CLIP1P30622 1438 aa28.12■■■□□ 2.09
TRPT1-208ENST00000539595 DNMBPQ6XZF7 1577 aa28.08■■■□□ 2.09
TRPT1-208ENST00000539595 CUX2O14529 1486 aa28.07■■■□□ 2.08
TRPT1-208ENST00000539595 TOPBP1Q92547 1522 aa28.01■■■□□ 2.07
TRPT1-208ENST00000539595 DNAJC5BQ9UF47 199 aa28■■■□□ 2.07
TRPT1-208ENST00000539595 VPS8Q8N3P4 1428 aa27.94■■■□□ 2.06
TRPT1-208ENST00000539595 IGF1RP08069 1367 aa27.93■■■□□ 2.06
TRPT1-208ENST00000539595 POLA1P09884 1462 aaPredicted RBP27.92■■■□□ 2.06
TRPT1-208ENST00000539595 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
TRPT1-208ENST00000539595 URB2Q14146 1524 aaKnown RBP27.89■■■□□ 2.05
TRPT1-208ENST00000539595 ABCA10Q8WWZ4 1543 aa27.88■■■□□ 2.05
TRPT1-208ENST00000539595 RAD54L2Q9Y4B4 1467 aa27.86■■■□□ 2.05
TRPT1-208ENST00000539595 RANGAP1P46060 587 aaPredicted RBP27.83■■■□□ 2.05
TRPT1-208ENST00000539595 TTBK1Q5TCY1 1321 aaPredicted RBP27.81■■■□□ 2.04
TRPT1-208ENST00000539595 CARMIL1Q5VZK9 1371 aa27.8■■■□□ 2.04
TRPT1-208ENST00000539595 KIF21AQ7Z4S6 1674 aa27.8■■■□□ 2.04
TRPT1-208ENST00000539595 ARAP1Q96P48 1450 aa27.79■■■□□ 2.04
TRPT1-208ENST00000539595 WDR97A6NE52 1622 aa27.75■■■□□ 2.03
TRPT1-208ENST00000539595 ARHGAP35Q9NRY4 1499 aa27.67■■■□□ 2.02
TRPT1-208ENST00000539595 ZEB1P37275 1124 aaPredicted RBP27.66■■■□□ 2.02
TRPT1-208ENST00000539595 CUL7Q14999 1698 aa27.65■■■□□ 2.02
TRPT1-208ENST00000539595 APLP2Q06481 763 aa27.64■■■□□ 2.01
TRPT1-208ENST00000539595 ABCA5Q8WWZ7 1642 aa27.62■■■□□ 2.01
TRPT1-208ENST00000539595 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
TRPT1-208ENST00000539595 TARBP1Q13395 1621 aaKnown RBP27.53■■■□□ 2
TRPT1-208ENST00000539595 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
TRPT1-208ENST00000539595 GAPVD1Q14C86 1478 aa27.53■■■□□ 2
TRPT1-208ENST00000539595 CTTNBP2Q8WZ74 1663 aa27.44■■□□□ 1.98
TRPT1-208ENST00000539595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.42■■□□□ 1.98
TRPT1-208ENST00000539595 EFCAB5A4FU69 1503 aa27.38■■□□□ 1.97
TRPT1-208ENST00000539595 WDR62O43379 1518 aa27.38■■□□□ 1.97
TRPT1-208ENST00000539595 KANK4Q5T7N3 995 aaPredicted RBP27.36■■□□□ 1.97
TRPT1-208ENST00000539595 CCER1Q8TC90 406 aaPredicted RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms