RNA–Protein interactions for RNA: ENST00000539436.5

TRPT1-207, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 1,726 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-207ENST00000539436 NISCHQ9Y2I1 1504 aa44.26■■■■■ 4.68
TRPT1-207ENST00000539436 CCDC180Q9P1Z9 1646 aa38.71■■■■□ 3.79
TRPT1-207ENST00000539436 ABCC9O60706 1549 aa37.15■■■■□ 3.54
TRPT1-207ENST00000539436 ZCCHC6Q5VYS8 1495 aaKnown RBP37.06■■■■□ 3.52
TRPT1-207ENST00000539436 DCAF8L2P0C7V8 631 aa36.86■■■■□ 3.49
TRPT1-207ENST00000539436 DCAF1Q9Y4B6 1507 aa36.52■■■■□ 3.44
TRPT1-207ENST00000539436 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
TRPT1-207ENST00000539436 NACADO15069 1562 aa36.2■■■■□ 3.39
TRPT1-207ENST00000539436 RB1CC1Q8TDY2 1594 aa36.01■■■■□ 3.35
TRPT1-207ENST00000539436 SHROOM4Q9ULL8 1493 aa35.93■■■■□ 3.34
TRPT1-207ENST00000539436 SCRIBQ14160 1630 aa35.65■■■■□ 3.3
TRPT1-207ENST00000539436 UNC13AQ9UPW8 1703 aa35.24■■■■□ 3.23
TRPT1-207ENST00000539436 PABPN1Q86U42 306 aaKnown RBP eCLIP35.01■■■■□ 3.2
TRPT1-207ENST00000539436 BICRAQ9NZM4 1560 aa34.96■■■■□ 3.19
TRPT1-207ENST00000539436 CECR2Q9BXF3 1484 aa34.49■■■■□ 3.11
TRPT1-207ENST00000539436 SUPT5HO00267 1087 aaKnown RBP34.35■■■■□ 3.09
TRPT1-207ENST00000539436 MROH2BQ7Z745 1585 aa34.21■■■■□ 3.07
TRPT1-207ENST00000539436 RSF1Q96T23 1441 aaPredicted RBP34.2■■■■□ 3.06
TRPT1-207ENST00000539436 BAZ1AQ9NRL2 1556 aaPredicted RBP34.18■■■■□ 3.06
TRPT1-207ENST00000539436 SMARCA4P51532 1647 aa34.1■■■■□ 3.05
TRPT1-207ENST00000539436 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
TRPT1-207ENST00000539436 WIZO95785 1651 aa33.9■■■■□ 3.02
TRPT1-207ENST00000539436 ATAD2BQ9ULI0 1458 aa33.68■■■□□ 2.98
TRPT1-207ENST00000539436 PEG3Q9GZU2 1588 aa33.66■■■□□ 2.98
TRPT1-207ENST00000539436 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
TRPT1-207ENST00000539436 CC2D2AQ9P2K1 1620 aa33.55■■■□□ 2.96
TRPT1-207ENST00000539436 TOP2AP11388 1531 aaKnown RBP33.49■■■□□ 2.95
TRPT1-207ENST00000539436 BAZ1BQ9UIG0 1483 aaKnown RBP33.46■■■□□ 2.95
TRPT1-207ENST00000539436 NCAPD3P42695 1498 aa33.45■■■□□ 2.94
TRPT1-207ENST00000539436 HMGXB3Q12766 1538 aa33.31■■■□□ 2.92
TRPT1-207ENST00000539436 DNAJC5BQ9UF47 199 aa33.24■■■□□ 2.91
TRPT1-207ENST00000539436 CCDC88BA6NC98 1476 aa33.2■■■□□ 2.91
TRPT1-207ENST00000539436 CHIC1Q5VXU3 224 aa32.62■■■□□ 2.81
TRPT1-207ENST00000539436 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
TRPT1-207ENST00000539436 CFTRP13569 1480 aa32.58■■■□□ 2.81
TRPT1-207ENST00000539436 NESP48681 1621 aa32.49■■■□□ 2.79
TRPT1-207ENST00000539436 ABCC8Q09428 1581 aa32.37■■■□□ 2.77
TRPT1-207ENST00000539436 LAMC3Q9Y6N6 1575 aa32.35■■■□□ 2.77
TRPT1-207ENST00000539436 TRIM41Q8WV44 630 aa32.29■■■□□ 2.76
TRPT1-207ENST00000539436 PRDM2Q13029 1718 aa32.29■■■□□ 2.76
TRPT1-207ENST00000539436 FANCD2Q9BXW9 1451 aa32.23■■■□□ 2.75
TRPT1-207ENST00000539436 WRNQ14191 1432 aaPredicted RBP eCLIP32.19■■■□□ 2.74
TRPT1-207ENST00000539436 PDS5BQ9NTI5 1447 aa32.15■■■□□ 2.74
TRPT1-207ENST00000539436 SYNJ1O43426 1573 aa32.07■■■□□ 2.72
TRPT1-207ENST00000539436 CEP164Q9UPV0 1460 aa32.05■■■□□ 2.72
TRPT1-207ENST00000539436 KIF21AQ7Z4S6 1674 aa32.01■■■□□ 2.72
TRPT1-207ENST00000539436 CUX1P39880 1505 aa32■■■□□ 2.71
TRPT1-207ENST00000539436 TOP2BQ02880 1626 aa31.94■■■□□ 2.7
TRPT1-207ENST00000539436 BIVM-ERCC5R4GMW8 1640 aa31.9■■■□□ 2.7
TRPT1-207ENST00000539436 ERCC6Q03468 1493 aa31.88■■■□□ 2.69
TRPT1-207ENST00000539436 URB2Q14146 1524 aaKnown RBP31.85■■■□□ 2.69
TRPT1-207ENST00000539436 TOPBP1Q92547 1522 aa31.82■■■□□ 2.68
TRPT1-207ENST00000539436 DNMBPQ6XZF7 1577 aa31.81■■■□□ 2.68
TRPT1-207ENST00000539436 FAM9AQ8IZU1 332 aaPredicted RBP31.76■■■□□ 2.67
TRPT1-207ENST00000539436 MRC2Q9UBG0 1479 aa31.76■■■□□ 2.67
TRPT1-207ENST00000539436 FGD5Q6ZNL6 1462 aa31.73■■■□□ 2.67
TRPT1-207ENST00000539436 SOGA1O94964 1423 aa31.7■■■□□ 2.66
TRPT1-207ENST00000539436 POLA1P09884 1462 aaPredicted RBP31.63■■■□□ 2.65
TRPT1-207ENST00000539436 RUSC2Q8N2Y8 1516 aa31.62■■■□□ 2.65
TRPT1-207ENST00000539436 THOC2Q8NI27 1593 aaKnown RBP31.59■■■□□ 2.65
TRPT1-207ENST00000539436 WDR62O43379 1518 aa31.59■■■□□ 2.65
TRPT1-207ENST00000539436 RAD54L2Q9Y4B4 1467 aa31.57■■■□□ 2.65
TRPT1-207ENST00000539436 CUX2O14529 1486 aa31.45■■■□□ 2.63
TRPT1-207ENST00000539436 EEA1Q15075 1411 aa31.44■■■□□ 2.62
TRPT1-207ENST00000539436 CSRNP3Q8WYN3 585 aa31.42■■■□□ 2.62
TRPT1-207ENST00000539436 LOC105371045A0A1W2PR82 267 aa31.41■■■□□ 2.62
TRPT1-207ENST00000539436 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
TRPT1-207ENST00000539436 ABCA10Q8WWZ4 1543 aa31.4■■■□□ 2.62
TRPT1-207ENST00000539436 EHMT2Q96KQ7 1210 aa31.39■■■□□ 2.62
TRPT1-207ENST00000539436 TARBP1Q13395 1621 aaKnown RBP31.35■■■□□ 2.61
TRPT1-207ENST00000539436 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
TRPT1-207ENST00000539436 WDR97A6NE52 1622 aa31.3■■■□□ 2.6
TRPT1-207ENST00000539436 IFT140Q96RY7 1462 aa31.3■■■□□ 2.6
TRPT1-207ENST00000539436 IGF1RP08069 1367 aa31.21■■■□□ 2.59
TRPT1-207ENST00000539436 ZNF608Q9ULD9 1512 aaPredicted RBP31.2■■■□□ 2.59
TRPT1-207ENST00000539436 AQRO60306 1485 aaKnown RBP eCLIP31.19■■■□□ 2.586e-9■■■■■ 37.6
TRPT1-207ENST00000539436 GAPVD1Q14C86 1478 aa31.18■■■□□ 2.58
TRPT1-207ENST00000539436 ABCA5Q8WWZ7 1642 aa31.17■■■□□ 2.58
TRPT1-207ENST00000539436 PRXQ9BXM0 1461 aa31.08■■■□□ 2.57
TRPT1-207ENST00000539436 KIF21BO75037 1637 aa31.06■■■□□ 2.56
TRPT1-207ENST00000539436 CARMIL1Q5VZK9 1371 aa31.05■■■□□ 2.56
TRPT1-207ENST00000539436 RAPGEF2Q9Y4G8 1499 aa31.04■■■□□ 2.56
TRPT1-207ENST00000539436 GOLGA3Q08378 1498 aa31.03■■■□□ 2.56
TRPT1-207ENST00000539436 EIF4G3O43432 1585 aaKnown RBP31.02■■■□□ 2.56
TRPT1-207ENST00000539436 ERICH3Q5RHP9 1530 aa31.02■■■□□ 2.56
TRPT1-207ENST00000539436 UBTFP17480 764 aaKnown RBP31.01■■■□□ 2.55
TRPT1-207ENST00000539436 GRIN2BQ13224 1484 aa30.99■■■□□ 2.55
TRPT1-207ENST00000539436 PBRM1Q86U86 1689 aa30.98■■■□□ 2.55
TRPT1-207ENST00000539436 CUL7Q14999 1698 aa30.91■■■□□ 2.54
TRPT1-207ENST00000539436 TNIKQ9UKE5 1360 aa30.86■■■□□ 2.53
TRPT1-207ENST00000539436 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
TRPT1-207ENST00000539436 FHAD1B1AJZ9 1412 aa30.82■■■□□ 2.53
TRPT1-207ENST00000539436 ADAMTS12P58397 1594 aa30.8■■■□□ 2.52
TRPT1-207ENST00000539436 MAGI1Q96QZ7 1491 aaPredicted RBP30.74■■■□□ 2.51
TRPT1-207ENST00000539436 RANGAP1P46060 587 aaPredicted RBP30.72■■■□□ 2.51
TRPT1-207ENST00000539436 FBLN2P98095 1184 aa30.7■■■□□ 2.5
TRPT1-207ENST00000539436 CHMP7Q8WUX9 453 aaPredicted RBP30.68■■■□□ 2.5
TRPT1-207ENST00000539436 CEP162Q5TB80 1403 aa30.67■■■□□ 2.5
TRPT1-207ENST00000539436 SYNJ2O15056 1496 aa30.65■■■□□ 2.5
TRPT1-207ENST00000539436 GRIN2AQ12879 1464 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms