RNA–Protein interactions for RNA: ENST00000539158.1

MED23-209, Transcript of mediator complex subunit 23, humanhuman

TSL 1 (best) BASIC

Gene MED23, Length 1,636 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED23-209ENST00000539158 NISCHQ9Y2I1 1504 aa17.87■□□□□ 0.45
MED23-209ENST00000539158 CCDC180Q9P1Z9 1646 aa15.62■□□□□ 0.09
MED23-209ENST00000539158 ABCC9O60706 1549 aa15.27■□□□□ 0.04
MED23-209ENST00000539158 ZCCHC6Q5VYS8 1495 aaKnown RBP15.09■□□□□ 0.01
MED23-209ENST00000539158 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.04
MED23-209ENST00000539158 DCAF1Q9Y4B6 1507 aa14.76□□□□□ -0.05
MED23-209ENST00000539158 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
MED23-209ENST00000539158 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
MED23-209ENST00000539158 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
MED23-209ENST00000539158 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
MED23-209ENST00000539158 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
MED23-209ENST00000539158 SCRIBQ14160 1630 aa14.4□□□□□ -0.1
MED23-209ENST00000539158 NACADO15069 1562 aa14.39□□□□□ -0.11
MED23-209ENST00000539158 UNC13AQ9UPW8 1703 aa14.2□□□□□ -0.14
MED23-209ENST00000539158 DNAJC5Q9H3Z4 198 aa14.19□□□□□ -0.14
MED23-209ENST00000539158 SUPT5HO00267 1087 aaKnown RBP14.13□□□□□ -0.15
MED23-209ENST00000539158 PABPN1Q86U42 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
MED23-209ENST00000539158 CHIC1Q5VXU3 224 aa13.95□□□□□ -0.18
MED23-209ENST00000539158 CECR2Q9BXF3 1484 aa13.89□□□□□ -0.19
MED23-209ENST00000539158 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
MED23-209ENST00000539158 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
MED23-209ENST00000539158 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
MED23-209ENST00000539158 WIZO95785 1651 aa13.83□□□□□ -0.2
MED23-209ENST00000539158 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
MED23-209ENST00000539158 BAZ1AQ9NRL2 1556 aaPredicted RBP13.8□□□□□ -0.2
MED23-209ENST00000539158 SMARCA4P51532 1647 aa13.78□□□□□ -0.2
MED23-209ENST00000539158 EIF4G1Q04637 1599 aaKnown RBP13.66□□□□□ -0.22
MED23-209ENST00000539158 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
MED23-209ENST00000539158 CUX2O14529 1486 aa13.58□□□□□ -0.24
MED23-209ENST00000539158 PEG3Q9GZU2 1588 aa13.56□□□□□ -0.24
MED23-209ENST00000539158 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
MED23-209ENST00000539158 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
MED23-209ENST00000539158 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
MED23-209ENST00000539158 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
MED23-209ENST00000539158 ERCC6Q03468 1493 aa13.33□□□□□ -0.28
MED23-209ENST00000539158 HMGXB3Q12766 1538 aa13.32□□□□□ -0.28
MED23-209ENST00000539158 ABCC8Q09428 1581 aa13.3□□□□□ -0.28
MED23-209ENST00000539158 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
MED23-209ENST00000539158 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
MED23-209ENST00000539158 NCAPD3P42695 1498 aa13.21□□□□□ -0.29
MED23-209ENST00000539158 SYNJ1O43426 1573 aa13.15□□□□□ -0.3
MED23-209ENST00000539158 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
MED23-209ENST00000539158 LOC105371045A0A1W2PR82 267 aa13.1□□□□□ -0.31
MED23-209ENST00000539158 BIVM-ERCC5R4GMW8 1640 aa13.08□□□□□ -0.32
MED23-209ENST00000539158 WRNQ14191 1432 aaPredicted RBP eCLIP13.07□□□□□ -0.32
MED23-209ENST00000539158 FAM9AQ8IZU1 332 aaPredicted RBP13.06□□□□□ -0.32
MED23-209ENST00000539158 TOP2BQ02880 1626 aa13.04□□□□□ -0.32
MED23-209ENST00000539158 CFTRP13569 1480 aa12.99□□□□□ -0.33
MED23-209ENST00000539158 THOC2Q8NI27 1593 aaKnown RBP12.99□□□□□ -0.33
MED23-209ENST00000539158 SOGA1O94964 1423 aa12.98□□□□□ -0.33
MED23-209ENST00000539158 RUSC2Q8N2Y8 1516 aa12.96□□□□□ -0.33
MED23-209ENST00000539158 CUX1P39880 1505 aa12.95□□□□□ -0.34
MED23-209ENST00000539158 EEA1Q15075 1411 aa12.95□□□□□ -0.34
MED23-209ENST00000539158 KIF21BO75037 1637 aa12.91□□□□□ -0.34
MED23-209ENST00000539158 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
MED23-209ENST00000539158 NESP48681 1621 aa12.9□□□□□ -0.34
MED23-209ENST00000539158 LAMC3Q9Y6N6 1575 aa12.89□□□□□ -0.35
MED23-209ENST00000539158 SENP3Q9H4L4 574 aaPredicted RBP12.87□□□□□ -0.35
MED23-209ENST00000539158 CADPSQ9ULU8 1353 aa12.86□□□□□ -0.35
MED23-209ENST00000539158 PDS5BQ9NTI5 1447 aa12.84□□□□□ -0.35
MED23-209ENST00000539158 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
MED23-209ENST00000539158 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
MED23-209ENST00000539158 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
MED23-209ENST00000539158 CEP164Q9UPV0 1460 aa12.8□□□□□ -0.36
MED23-209ENST00000539158 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
MED23-209ENST00000539158 DNMBPQ6XZF7 1577 aa12.79□□□□□ -0.36
MED23-209ENST00000539158 CSRNP3Q8WYN3 585 aa12.78□□□□□ -0.36
MED23-209ENST00000539158 CEP162Q5TB80 1403 aa12.78□□□□□ -0.36
MED23-209ENST00000539158 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
MED23-209ENST00000539158 WDR97A6NE52 1622 aa12.76□□□□□ -0.37
MED23-209ENST00000539158 TNIKQ9UKE5 1360 aa12.75□□□□□ -0.37
MED23-209ENST00000539158 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
MED23-209ENST00000539158 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
MED23-209ENST00000539158 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
MED23-209ENST00000539158 WDR62O43379 1518 aa12.71□□□□□ -0.37
MED23-209ENST00000539158 TOPBP1Q92547 1522 aa12.71□□□□□ -0.37
MED23-209ENST00000539158 KIF27Q86VH2 1401 aa12.69□□□□□ -0.38
MED23-209ENST00000539158 PRXQ9BXM0 1461 aa12.69□□□□□ -0.38
MED23-209ENST00000539158 PCGF6Q9BYE7 350 aa12.69□□□□□ -0.38
MED23-209ENST00000539158 URB2Q14146 1524 aaKnown RBP12.67□□□□□ -0.38
MED23-209ENST00000539158 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
MED23-209ENST00000539158 UBTFP17480 764 aaKnown RBP12.65□□□□□ -0.38
MED23-209ENST00000539158 RIMBP3CA6NJZ7 1639 aa12.64□□□□□ -0.39
MED23-209ENST00000539158 RIMBP3BA6NNM3 1639 aa12.64□□□□□ -0.39
MED23-209ENST00000539158 RIMBP3Q9UFD9 1639 aa12.64□□□□□ -0.39
MED23-209ENST00000539158 ABCA10Q8WWZ4 1543 aa12.62□□□□□ -0.39
MED23-209ENST00000539158 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
MED23-209ENST00000539158 ABCA5Q8WWZ7 1642 aa12.61□□□□□ -0.39
MED23-209ENST00000539158 CLIP1P30622 1438 aa12.61□□□□□ -0.39
MED23-209ENST00000539158 CUL7Q14999 1698 aa12.61□□□□□ -0.39
MED23-209ENST00000539158 TRIM26Q12899 539 aaPredicted RBP12.6□□□□□ -0.39
MED23-209ENST00000539158 CTTNBP2Q8WZ74 1663 aa12.58□□□□□ -0.39
MED23-209ENST00000539158 PBRM1Q86U86 1689 aa12.58□□□□□ -0.4
MED23-209ENST00000539158 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
MED23-209ENST00000539158 ARHGEF11O15085 1522 aa12.56□□□□□ -0.4
MED23-209ENST00000539158 TRHP20396 242 aaPredicted RBP12.55□□□□□ -0.4
MED23-209ENST00000539158 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
MED23-209ENST00000539158 VPS8Q8N3P4 1428 aa12.54□□□□□ -0.4
MED23-209ENST00000539158 IGF1RP08069 1367 aa12.53□□□□□ -0.4
MED23-209ENST00000539158 PPARGC1BQ86YN6 1023 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms