RNA–Protein interactions for RNA: ENST00000539063.5

PHC1-206, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-206ENST00000539063 NISCHQ9Y2I1 1504 aa21.75■■□□□ 1.07
PHC1-206ENST00000539063 CCDC180Q9P1Z9 1646 aa19.02■□□□□ 0.64
PHC1-206ENST00000539063 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
PHC1-206ENST00000539063 DCAF8L2P0C7V8 631 aa18.09■□□□□ 0.49
PHC1-206ENST00000539063 ABCC9O60706 1549 aa18.06■□□□□ 0.48
PHC1-206ENST00000539063 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
PHC1-206ENST00000539063 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
PHC1-206ENST00000539063 NACADO15069 1562 aa17.76■□□□□ 0.43
PHC1-206ENST00000539063 SHROOM4Q9ULL8 1493 aa17.72■□□□□ 0.43
PHC1-206ENST00000539063 RB1CC1Q8TDY2 1594 aa17.65■□□□□ 0.42
PHC1-206ENST00000539063 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
PHC1-206ENST00000539063 UNC13AQ9UPW8 1703 aa17.08■□□□□ 0.32
PHC1-206ENST00000539063 SUPT5HO00267 1087 aaKnown RBP17.06■□□□□ 0.32
PHC1-206ENST00000539063 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
PHC1-206ENST00000539063 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
PHC1-206ENST00000539063 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
PHC1-206ENST00000539063 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
PHC1-206ENST00000539063 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
PHC1-206ENST00000539063 MROH2BQ7Z745 1585 aa16.77■□□□□ 0.27
PHC1-206ENST00000539063 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
PHC1-206ENST00000539063 WIZO95785 1651 aa16.6■□□□□ 0.25
PHC1-206ENST00000539063 SMARCA2P51531 1590 aa16.54■□□□□ 0.24
PHC1-206ENST00000539063 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
PHC1-206ENST00000539063 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.24
PHC1-206ENST00000539063 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
PHC1-206ENST00000539063 ATAD2BQ9ULI0 1458 aa16.49■□□□□ 0.23
PHC1-206ENST00000539063 BAZ1BQ9UIG0 1483 aaKnown RBP16.45■□□□□ 0.22
PHC1-206ENST00000539063 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
PHC1-206ENST00000539063 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
PHC1-206ENST00000539063 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
PHC1-206ENST00000539063 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
PHC1-206ENST00000539063 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
PHC1-206ENST00000539063 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
PHC1-206ENST00000539063 CADPSQ9ULU8 1353 aa15.98■□□□□ 0.15
PHC1-206ENST00000539063 CFTRP13569 1480 aa15.97■□□□□ 0.15
PHC1-206ENST00000539063 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
PHC1-206ENST00000539063 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
PHC1-206ENST00000539063 AEBP2Q6ZN18 517 aaPredicted RBP15.9■□□□□ 0.14
PHC1-206ENST00000539063 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
PHC1-206ENST00000539063 LAMC3Q9Y6N6 1575 aa15.84■□□□□ 0.13
PHC1-206ENST00000539063 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
PHC1-206ENST00000539063 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
PHC1-206ENST00000539063 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
PHC1-206ENST00000539063 NESP48681 1621 aa15.77■□□□□ 0.12
PHC1-206ENST00000539063 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
PHC1-206ENST00000539063 FAM9AQ8IZU1 332 aaPredicted RBP15.75■□□□□ 0.11
PHC1-206ENST00000539063 TOP2BQ02880 1626 aa15.74■□□□□ 0.11
PHC1-206ENST00000539063 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
PHC1-206ENST00000539063 EEA1Q15075 1411 aa15.72■□□□□ 0.11
PHC1-206ENST00000539063 BIVM-ERCC5R4GMW8 1640 aa15.71■□□□□ 0.11
PHC1-206ENST00000539063 CUX1P39880 1505 aa15.7■□□□□ 0.1
PHC1-206ENST00000539063 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
PHC1-206ENST00000539063 SOGA1O94964 1423 aa15.62■□□□□ 0.09
PHC1-206ENST00000539063 TOPBP1Q92547 1522 aa15.59■□□□□ 0.09
PHC1-206ENST00000539063 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
PHC1-206ENST00000539063 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
PHC1-206ENST00000539063 LOC105371045A0A1W2PR82 267 aa15.58■□□□□ 0.08
PHC1-206ENST00000539063 FGD5Q6ZNL6 1462 aa15.58■□□□□ 0.08
PHC1-206ENST00000539063 KIF27Q86VH2 1401 aa15.56■□□□□ 0.08
PHC1-206ENST00000539063 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
PHC1-206ENST00000539063 KIF21AQ7Z4S6 1674 aa15.56■□□□□ 0.08
PHC1-206ENST00000539063 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
PHC1-206ENST00000539063 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.08
PHC1-206ENST00000539063 RUSC2Q8N2Y8 1516 aa15.51■□□□□ 0.07
PHC1-206ENST00000539063 CUX2O14529 1486 aa15.5■□□□□ 0.07
PHC1-206ENST00000539063 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
PHC1-206ENST00000539063 GOLGA3Q08378 1498 aa15.46■□□□□ 0.07
PHC1-206ENST00000539063 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
PHC1-206ENST00000539063 RAD54L2Q9Y4B4 1467 aa15.44■□□□□ 0.06
PHC1-206ENST00000539063 UBTFP17480 764 aaKnown RBP15.43■□□□□ 0.06
PHC1-206ENST00000539063 WDR62O43379 1518 aa15.43■□□□□ 0.06
PHC1-206ENST00000539063 KIF21BO75037 1637 aa15.42■□□□□ 0.06
PHC1-206ENST00000539063 TNIKQ9UKE5 1360 aa15.38■□□□□ 0.05
PHC1-206ENST00000539063 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
PHC1-206ENST00000539063 THOC2Q8NI27 1593 aaKnown RBP15.36■□□□□ 0.05
PHC1-206ENST00000539063 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
PHC1-206ENST00000539063 IGF1RP08069 1367 aa15.35■□□□□ 0.05
PHC1-206ENST00000539063 PRXQ9BXM0 1461 aa15.34■□□□□ 0.05
PHC1-206ENST00000539063 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
PHC1-206ENST00000539063 CARMIL1Q5VZK9 1371 aa15.32■□□□□ 0.04
PHC1-206ENST00000539063 TDRD9Q8NDG6 1382 aaKnown RBP15.32■□□□□ 0.04
PHC1-206ENST00000539063 RAPGEF2Q9Y4G8 1499 aa15.32■□□□□ 0.04
PHC1-206ENST00000539063 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
PHC1-206ENST00000539063 TARBP1Q13395 1621 aaKnown RBP15.31■□□□□ 0.04
PHC1-206ENST00000539063 CEP162Q5TB80 1403 aa15.28■□□□□ 0.04
PHC1-206ENST00000539063 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
PHC1-206ENST00000539063 CUL7Q14999 1698 aa15.27■□□□□ 0.03
PHC1-206ENST00000539063 GRIN2BQ13224 1484 aa15.24■□□□□ 0.03
PHC1-206ENST00000539063 AQRO60306 1485 aaKnown RBP eCLIP15.22■□□□□ 0.03
PHC1-206ENST00000539063 CLIP1P30622 1438 aa15.21■□□□□ 0.03
PHC1-206ENST00000539063 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
PHC1-206ENST00000539063 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
PHC1-206ENST00000539063 PBRM1Q86U86 1689 aa15.17■□□□□ 0.02
PHC1-206ENST00000539063 RANGAP1P46060 587 aaPredicted RBP15.17■□□□□ 0.02
PHC1-206ENST00000539063 EIF4G3O43432 1585 aaKnown RBP15.15■□□□□ 0.02
PHC1-206ENST00000539063 ADAMTS12P58397 1594 aa15.13■□□□□ 0.01
PHC1-206ENST00000539063 SNAPC4Q5SXM2 1469 aa15.11■□□□□ 0.01
PHC1-206ENST00000539063 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
PHC1-206ENST00000539063 APLP2Q06481 763 aa15.06■□□□□ 0
PHC1-206ENST00000539063 CHMP7Q8WUX9 453 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms