RNA–Protein interactions for RNA: ENST00000539030.5

SCNN1A-213, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 315 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-213ENST00000539030 NISCHQ9Y2I1 1504 aa16.43■□□□□ 0.22
SCNN1A-213ENST00000539030 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.09
SCNN1A-213ENST00000539030 ABCC9O60706 1549 aa13.9□□□□□ -0.19
SCNN1A-213ENST00000539030 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
SCNN1A-213ENST00000539030 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
SCNN1A-213ENST00000539030 DCAF1Q9Y4B6 1507 aa13.62□□□□□ -0.23
SCNN1A-213ENST00000539030 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
SCNN1A-213ENST00000539030 NACADO15069 1562 aa13.57□□□□□ -0.24
SCNN1A-213ENST00000539030 DNAJC5BQ9UF47 199 aa13.51□□□□□ -0.25
SCNN1A-213ENST00000539030 RB1CC1Q8TDY2 1594 aa13.5□□□□□ -0.25
SCNN1A-213ENST00000539030 SCRIBQ14160 1630 aa13.21□□□□□ -0.3
SCNN1A-213ENST00000539030 SHROOM4Q9ULL8 1493 aa13.13□□□□□ -0.31
SCNN1A-213ENST00000539030 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
SCNN1A-213ENST00000539030 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
SCNN1A-213ENST00000539030 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
SCNN1A-213ENST00000539030 BICRAQ9NZM4 1560 aa13.04□□□□□ -0.32
SCNN1A-213ENST00000539030 CECR2Q9BXF3 1484 aa12.74□□□□□ -0.37
SCNN1A-213ENST00000539030 BAZ1AQ9NRL2 1556 aaPredicted RBP12.72□□□□□ -0.37
SCNN1A-213ENST00000539030 EIF4G1Q04637 1599 aaKnown RBP12.7□□□□□ -0.38
SCNN1A-213ENST00000539030 SMARCA4P51532 1647 aa12.67□□□□□ -0.38
SCNN1A-213ENST00000539030 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
SCNN1A-213ENST00000539030 RSF1Q96T23 1441 aaPredicted RBP12.62□□□□□ -0.39
SCNN1A-213ENST00000539030 SMARCA2P51531 1590 aa12.56□□□□□ -0.4
SCNN1A-213ENST00000539030 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
SCNN1A-213ENST00000539030 ATAD2BQ9ULI0 1458 aa12.56□□□□□ -0.4
SCNN1A-213ENST00000539030 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
SCNN1A-213ENST00000539030 SUPT5HO00267 1087 aaKnown RBP12.54□□□□□ -0.4
SCNN1A-213ENST00000539030 NCAPD3P42695 1498 aa12.53□□□□□ -0.4
SCNN1A-213ENST00000539030 WIZO95785 1651 aa12.5□□□□□ -0.41
SCNN1A-213ENST00000539030 BAZ1BQ9UIG0 1483 aaKnown RBP12.47□□□□□ -0.41
SCNN1A-213ENST00000539030 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
SCNN1A-213ENST00000539030 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
SCNN1A-213ENST00000539030 CUX2O14529 1486 aa12.33□□□□□ -0.44
SCNN1A-213ENST00000539030 CCDC88BA6NC98 1476 aa12.28□□□□□ -0.44
SCNN1A-213ENST00000539030 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
SCNN1A-213ENST00000539030 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
SCNN1A-213ENST00000539030 CFTRP13569 1480 aa12.14□□□□□ -0.47
SCNN1A-213ENST00000539030 LAMC3Q9Y6N6 1575 aa12.13□□□□□ -0.47
SCNN1A-213ENST00000539030 NESP48681 1621 aa12.08□□□□□ -0.48
SCNN1A-213ENST00000539030 PDS5BQ9NTI5 1447 aa12.08□□□□□ -0.48
SCNN1A-213ENST00000539030 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.49
SCNN1A-213ENST00000539030 ERCC6Q03468 1493 aa12.01□□□□□ -0.49
SCNN1A-213ENST00000539030 PRDM2Q13029 1718 aa12□□□□□ -0.49
SCNN1A-213ENST00000539030 CEP164Q9UPV0 1460 aa11.99□□□□□ -0.49
SCNN1A-213ENST00000539030 KIF21AQ7Z4S6 1674 aa11.93□□□□□ -0.5
SCNN1A-213ENST00000539030 MRC2Q9UBG0 1479 aa11.91□□□□□ -0.5
SCNN1A-213ENST00000539030 WRNQ14191 1432 aaPredicted RBP eCLIP11.91□□□□□ -0.5
SCNN1A-213ENST00000539030 ABCC8Q09428 1581 aa11.91□□□□□ -0.5
SCNN1A-213ENST00000539030 CHIC1Q5VXU3 224 aa11.87□□□□□ -0.51
SCNN1A-213ENST00000539030 DNMBPQ6XZF7 1577 aa11.86□□□□□ -0.51
SCNN1A-213ENST00000539030 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
SCNN1A-213ENST00000539030 TOPBP1Q92547 1522 aa11.85□□□□□ -0.51
SCNN1A-213ENST00000539030 WDR62O43379 1518 aa11.84□□□□□ -0.51
SCNN1A-213ENST00000539030 CUX1P39880 1505 aa11.84□□□□□ -0.51
SCNN1A-213ENST00000539030 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
SCNN1A-213ENST00000539030 TOP2BQ02880 1626 aa11.82□□□□□ -0.52
SCNN1A-213ENST00000539030 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
SCNN1A-213ENST00000539030 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
SCNN1A-213ENST00000539030 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.52
SCNN1A-213ENST00000539030 FGD5Q6ZNL6 1462 aa11.77□□□□□ -0.52
SCNN1A-213ENST00000539030 SOGA1O94964 1423 aa11.75□□□□□ -0.53
SCNN1A-213ENST00000539030 IFT140Q96RY7 1462 aa11.74□□□□□ -0.53
SCNN1A-213ENST00000539030 AEBP2Q6ZN18 517 aaPredicted RBP11.73□□□□□ -0.53
SCNN1A-213ENST00000539030 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
SCNN1A-213ENST00000539030 ABCA10Q8WWZ4 1543 aa11.69□□□□□ -0.54
SCNN1A-213ENST00000539030 TARBP1Q13395 1621 aaKnown RBP11.68□□□□□ -0.54
SCNN1A-213ENST00000539030 KIF27Q86VH2 1401 aa11.66□□□□□ -0.54
SCNN1A-213ENST00000539030 WDR97A6NE52 1622 aa11.64□□□□□ -0.55
SCNN1A-213ENST00000539030 EEA1Q15075 1411 aa11.64□□□□□ -0.55
SCNN1A-213ENST00000539030 TDRD9Q8NDG6 1382 aaKnown RBP11.64□□□□□ -0.55
SCNN1A-213ENST00000539030 GAPVD1Q14C86 1478 aa11.61□□□□□ -0.55
SCNN1A-213ENST00000539030 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
SCNN1A-213ENST00000539030 AQRO60306 1485 aaKnown RBP eCLIP11.6□□□□□ -0.55
SCNN1A-213ENST00000539030 GRIN2BQ13224 1484 aa11.58□□□□□ -0.56
SCNN1A-213ENST00000539030 ABCA5Q8WWZ7 1642 aa11.58□□□□□ -0.56
SCNN1A-213ENST00000539030 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
SCNN1A-213ENST00000539030 RUSC2Q8N2Y8 1516 aa11.57□□□□□ -0.56
SCNN1A-213ENST00000539030 FAM9AQ8IZU1 332 aaPredicted RBP11.57□□□□□ -0.56
SCNN1A-213ENST00000539030 EIF4G3O43432 1585 aaKnown RBP11.57□□□□□ -0.56
SCNN1A-213ENST00000539030 IGF1RP08069 1367 aa11.56□□□□□ -0.56
SCNN1A-213ENST00000539030 ERICH3Q5RHP9 1530 aa11.55□□□□□ -0.56
SCNN1A-213ENST00000539030 RIMBP3CA6NJZ7 1639 aa11.54□□□□□ -0.56
SCNN1A-213ENST00000539030 RIMBP3BA6NNM3 1639 aa11.54□□□□□ -0.56
SCNN1A-213ENST00000539030 RIMBP3Q9UFD9 1639 aa11.54□□□□□ -0.56
SCNN1A-213ENST00000539030 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.57
SCNN1A-213ENST00000539030 MAGI1Q96QZ7 1491 aaPredicted RBP11.51□□□□□ -0.57
SCNN1A-213ENST00000539030 PBRM1Q86U86 1689 aa11.51□□□□□ -0.57
SCNN1A-213ENST00000539030 FHAD1B1AJZ9 1412 aa11.5□□□□□ -0.57
SCNN1A-213ENST00000539030 SNAPC4Q5SXM2 1469 aa11.5□□□□□ -0.57
SCNN1A-213ENST00000539030 CUL7Q14999 1698 aa11.49□□□□□ -0.57
SCNN1A-213ENST00000539030 PRXQ9BXM0 1461 aa11.48□□□□□ -0.57
SCNN1A-213ENST00000539030 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
SCNN1A-213ENST00000539030 CHMP7Q8WUX9 453 aaPredicted RBP11.47□□□□□ -0.57
SCNN1A-213ENST00000539030 SYNJ2O15056 1496 aa11.46□□□□□ -0.57
SCNN1A-213ENST00000539030 RAPGEF2Q9Y4G8 1499 aa11.46□□□□□ -0.57
SCNN1A-213ENST00000539030 ADAMTS12P58397 1594 aa11.45□□□□□ -0.58
SCNN1A-213ENST00000539030 FBLN2P98095 1184 aa11.45□□□□□ -0.58
SCNN1A-213ENST00000539030 KIF21BO75037 1637 aa11.43□□□□□ -0.58
SCNN1A-213ENST00000539030 GOLGA3Q08378 1498 aa11.43□□□□□ -0.58
SCNN1A-213ENST00000539030 GRIN2AQ12879 1464 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms