RNA–Protein interactions for RNA: ENST00000538915.2

ARHGAP44-204, Transcript of Rho GTPase activating protein 44, humanhuman

TSL 3

Gene ARHGAP44, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP44-204ENST00000538915 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
ARHGAP44-204ENST00000538915 CCDC180Q9P1Z9 1646 aa15.14■□□□□ 0.01
ARHGAP44-204ENST00000538915 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
ARHGAP44-204ENST00000538915 AEBP2Q6ZN18 517 aaPredicted RBP14.74□□□□□ -0.05
ARHGAP44-204ENST00000538915 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
ARHGAP44-204ENST00000538915 CHIC1Q5VXU3 224 aa14.34□□□□□ -0.11
ARHGAP44-204ENST00000538915 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
ARHGAP44-204ENST00000538915 SHROOM4Q9ULL8 1493 aa14.15□□□□□ -0.14
ARHGAP44-204ENST00000538915 NACADO15069 1562 aa14□□□□□ -0.17
ARHGAP44-204ENST00000538915 DCAF8L2P0C7V8 631 aa13.94□□□□□ -0.18
ARHGAP44-204ENST00000538915 ABCC9O60706 1549 aa13.88□□□□□ -0.19
ARHGAP44-204ENST00000538915 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
ARHGAP44-204ENST00000538915 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
ARHGAP44-204ENST00000538915 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
ARHGAP44-204ENST00000538915 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
ARHGAP44-204ENST00000538915 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
ARHGAP44-204ENST00000538915 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
ARHGAP44-204ENST00000538915 CECR2Q9BXF3 1484 aa13.39□□□□□ -0.27
ARHGAP44-204ENST00000538915 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
ARHGAP44-204ENST00000538915 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
ARHGAP44-204ENST00000538915 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
ARHGAP44-204ENST00000538915 WIZO95785 1651 aa13.28□□□□□ -0.28
ARHGAP44-204ENST00000538915 PEG3Q9GZU2 1588 aa13.27□□□□□ -0.29
ARHGAP44-204ENST00000538915 BICRAQ9NZM4 1560 aa13.25□□□□□ -0.29
ARHGAP44-204ENST00000538915 EIF4G1Q04637 1599 aaKnown RBP13.22□□□□□ -0.29
ARHGAP44-204ENST00000538915 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
ARHGAP44-204ENST00000538915 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
ARHGAP44-204ENST00000538915 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
ARHGAP44-204ENST00000538915 EEA1Q15075 1411 aa13□□□□□ -0.33
ARHGAP44-204ENST00000538915 ATAD2BQ9ULI0 1458 aa12.99□□□□□ -0.33
ARHGAP44-204ENST00000538915 LOC105371045A0A1W2PR82 267 aa12.95□□□□□ -0.34
ARHGAP44-204ENST00000538915 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
ARHGAP44-204ENST00000538915 BAZ1BQ9UIG0 1483 aaKnown RBP12.92□□□□□ -0.34
ARHGAP44-204ENST00000538915 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
ARHGAP44-204ENST00000538915 NCAPD3P42695 1498 aa12.9□□□□□ -0.34
ARHGAP44-204ENST00000538915 HRCP23327 699 aa12.87□□□□□ -0.35
ARHGAP44-204ENST00000538915 TRIM26Q12899 539 aaPredicted RBP12.87□□□□□ -0.35
ARHGAP44-204ENST00000538915 ABCC8Q09428 1581 aa12.82□□□□□ -0.36
ARHGAP44-204ENST00000538915 WRNQ14191 1432 aaPredicted RBP eCLIP12.82□□□□□ -0.36
ARHGAP44-204ENST00000538915 PCGF6Q9BYE7 350 aa12.78□□□□□ -0.36
ARHGAP44-204ENST00000538915 TNIKQ9UKE5 1360 aa12.77□□□□□ -0.37
ARHGAP44-204ENST00000538915 KIF21BO75037 1637 aa12.73□□□□□ -0.37
ARHGAP44-204ENST00000538915 TOP2BQ02880 1626 aa12.73□□□□□ -0.37
ARHGAP44-204ENST00000538915 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
ARHGAP44-204ENST00000538915 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
ARHGAP44-204ENST00000538915 SYNJ1O43426 1573 aa12.71□□□□□ -0.37
ARHGAP44-204ENST00000538915 GOLGA3Q08378 1498 aa12.71□□□□□ -0.38
ARHGAP44-204ENST00000538915 CEP164Q9UPV0 1460 aa12.7□□□□□ -0.38
ARHGAP44-204ENST00000538915 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
ARHGAP44-204ENST00000538915 CFTRP13569 1480 aa12.69□□□□□ -0.38
ARHGAP44-204ENST00000538915 SOGA1O94964 1423 aa12.69□□□□□ -0.38
ARHGAP44-204ENST00000538915 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
ARHGAP44-204ENST00000538915 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
ARHGAP44-204ENST00000538915 PRDM2Q13029 1718 aa12.67□□□□□ -0.38
ARHGAP44-204ENST00000538915 CEP162Q5TB80 1403 aa12.64□□□□□ -0.39
ARHGAP44-204ENST00000538915 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
ARHGAP44-204ENST00000538915 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
ARHGAP44-204ENST00000538915 PHF23Q9BUL5 403 aaPredicted RBP12.57□□□□□ -0.4
ARHGAP44-204ENST00000538915 SENP3Q9H4L4 574 aaPredicted RBP12.55□□□□□ -0.4
ARHGAP44-204ENST00000538915 PRXQ9BXM0 1461 aa12.53□□□□□ -0.4
ARHGAP44-204ENST00000538915 CADPSQ9ULU8 1353 aa12.53□□□□□ -0.4
ARHGAP44-204ENST00000538915 CUX1P39880 1505 aa12.52□□□□□ -0.4
ARHGAP44-204ENST00000538915 KIF27Q86VH2 1401 aa12.5□□□□□ -0.41
ARHGAP44-204ENST00000538915 CC2D2AQ9P2K1 1620 aa12.48□□□□□ -0.41
ARHGAP44-204ENST00000538915 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
ARHGAP44-204ENST00000538915 CLIP1P30622 1438 aa12.46□□□□□ -0.41
ARHGAP44-204ENST00000538915 VPS8Q8N3P4 1428 aa12.46□□□□□ -0.41
ARHGAP44-204ENST00000538915 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
ARHGAP44-204ENST00000538915 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
ARHGAP44-204ENST00000538915 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
ARHGAP44-204ENST00000538915 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
ARHGAP44-204ENST00000538915 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
ARHGAP44-204ENST00000538915 MAP3K1Q13233 1512 aa12.32□□□□□ -0.44
ARHGAP44-204ENST00000538915 ABCA10Q8WWZ4 1543 aa12.32□□□□□ -0.44
ARHGAP44-204ENST00000538915 FGD5Q6ZNL6 1462 aa12.32□□□□□ -0.44
ARHGAP44-204ENST00000538915 IGF1RP08069 1367 aa12.31□□□□□ -0.44
ARHGAP44-204ENST00000538915 CUX2O14529 1486 aa12.29□□□□□ -0.44
ARHGAP44-204ENST00000538915 ARAP1Q96P48 1450 aa12.29□□□□□ -0.44
ARHGAP44-204ENST00000538915 CUL7Q14999 1698 aa12.27□□□□□ -0.45
ARHGAP44-204ENST00000538915 TOPBP1Q92547 1522 aa12.27□□□□□ -0.45
ARHGAP44-204ENST00000538915 APLP2Q06481 763 aa12.26□□□□□ -0.45
ARHGAP44-204ENST00000538915 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
ARHGAP44-204ENST00000538915 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
ARHGAP44-204ENST00000538915 PDS5BQ9NTI5 1447 aa12.25□□□□□ -0.45
ARHGAP44-204ENST00000538915 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
ARHGAP44-204ENST00000538915 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
ARHGAP44-204ENST00000538915 ARHGAP35Q9NRY4 1499 aa12.22□□□□□ -0.45
ARHGAP44-204ENST00000538915 EFCAB5A4FU69 1503 aa12.21□□□□□ -0.45
ARHGAP44-204ENST00000538915 CLSPNQ9HAW4 1339 aa12.21□□□□□ -0.45
ARHGAP44-204ENST00000538915 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
ARHGAP44-204ENST00000538915 RRBP1Q9P2E9 1410 aaKnown RBP12.19□□□□□ -0.46
ARHGAP44-204ENST00000538915 CCER1Q8TC90 406 aaPredicted RBP12.18□□□□□ -0.46
ARHGAP44-204ENST00000538915 AQRO60306 1485 aaKnown RBP eCLIP12.18□□□□□ -0.46
ARHGAP44-204ENST00000538915 ABCA5Q8WWZ7 1642 aa12.17□□□□□ -0.46
ARHGAP44-204ENST00000538915 URB2Q14146 1524 aaKnown RBP12.16□□□□□ -0.46
ARHGAP44-204ENST00000538915 NESP48681 1621 aa12.13□□□□□ -0.47
ARHGAP44-204ENST00000538915 TIAM1Q13009 1591 aa12.13□□□□□ -0.47
ARHGAP44-204ENST00000538915 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
ARHGAP44-204ENST00000538915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
ARHGAP44-204ENST00000538915 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms